RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 ANKRD2Q9GZV1 360 aa9.55□□□□□ -0.88
RBM39-209ENST00000416529 COPRSQ9NQ92 184 aa9.55□□□□□ -0.88
RBM39-209ENST00000416529 LTBP3Q9NS15 1303 aa9.55□□□□□ -0.88
RBM39-209ENST00000416529 ARFGEF1Q9Y6D6 1849 aa9.54□□□□□ -0.88
RBM39-209ENST00000416529 DDX60Q8IY21 1712 aaKnown RBP9.54□□□□□ -0.88
RBM39-209ENST00000416529 ABCC12Q96J65 1359 aa9.54□□□□□ -0.88
RBM39-209ENST00000416529 BRCA1P38398 1863 aaKnown RBP9.54□□□□□ -0.88
RBM39-209ENST00000416529 IRF6O14896 467 aa9.54□□□□□ -0.88
RBM39-209ENST00000416529 FOXO4P98177 505 aa9.54□□□□□ -0.88
RBM39-209ENST00000416529 ATP8B2P98198 1209 aa9.54□□□□□ -0.88
RBM39-209ENST00000416529 NUTM1Q86Y26 1132 aa9.54□□□□□ -0.88
RBM39-209ENST00000416529 CLUAP1Q96AJ1 413 aa9.54□□□□□ -0.88
RBM39-209ENST00000416529 THAP11Q96EK4 314 aa9.54□□□□□ -0.88
RBM39-209ENST00000416529 PODXL2Q9NZ53 605 aa9.54□□□□□ -0.88
RBM39-209ENST00000416529 SLC27A5Q9Y2P5 690 aa9.54□□□□□ -0.88
RBM39-209ENST00000416529 MROH5Q6ZUA9 1318 aa9.54□□□□□ -0.88
RBM39-209ENST00000416529 ZC3H4Q9UPT8 1303 aaKnown RBP9.54□□□□□ -0.88
RBM39-209ENST00000416529 CD2BP2O95400 341 aaKnown RBP9.53□□□□□ -0.88
RBM39-209ENST00000416529 NEFLP07196 543 aa9.53□□□□□ -0.88
RBM39-209ENST00000416529 RLBP1P12271 317 aa9.53□□□□□ -0.88
RBM39-209ENST00000416529 MMP14P50281 582 aa9.53□□□□□ -0.88
RBM39-209ENST00000416529 USP46P62068 366 aa9.53□□□□□ -0.88
RBM39-209ENST00000416529 LMBR1LQ6UX01 489 aa9.53□□□□□ -0.88
RBM39-209ENST00000416529 ERC1Q8IUD2 1116 aa9.53□□□□□ -0.88
RBM39-209ENST00000416529 SSH3Q8TE77 659 aa9.53□□□□□ -0.88
RBM39-209ENST00000416529 NLRP7Q8WX94 980 aa9.53□□□□□ -0.88
RBM39-209ENST00000416529 EMID1Q96A84 441 aaPredicted RBP9.53□□□□□ -0.88
RBM39-209ENST00000416529 PSMD1Q99460 953 aa9.53□□□□□ -0.88
RBM39-209ENST00000416529 MPHOSPH8Q99549 860 aa9.53□□□□□ -0.88
RBM39-209ENST00000416529 MEIS3Q99687 375 aa9.53□□□□□ -0.88
RBM39-209ENST00000416529 NOP58Q9Y2X3 529 aaKnown RBP9.53□□□□□ -0.88
RBM39-209ENST00000416529 ATP6V0A2Q9Y487 856 aa9.53□□□□□ -0.88
RBM39-209ENST00000416529 SUPT16HQ9Y5B9 1047 aaKnown RBP9.53□□□□□ -0.88
RBM39-209ENST00000416529 HCLS1P14317 486 aaPredicted RBP9.52□□□□□ -0.89
RBM39-209ENST00000416529 DPEP1P16444 411 aa9.52□□□□□ -0.89
RBM39-209ENST00000416529 KCNA3P22001 575 aa9.52□□□□□ -0.89
RBM39-209ENST00000416529 ITGA6P23229 1130 aa9.52□□□□□ -0.89
RBM39-209ENST00000416529 MSS51Q4VC12 460 aa9.52□□□□□ -0.89
RBM39-209ENST00000416529 CCDC93Q567U6 631 aa9.52□□□□□ -0.89
RBM39-209ENST00000416529 ANKRD44Q8N8A2 993 aa9.52□□□□□ -0.89
RBM39-209ENST00000416529 PANK1Q8TE04 598 aa9.52□□□□□ -0.89
RBM39-209ENST00000416529 KAZALD1Q96I82 304 aa9.52□□□□□ -0.89
RBM39-209ENST00000416529 SUCLG2Q96I99 432 aa9.52□□□□□ -0.89
RBM39-209ENST00000416529 RTFDC1Q9BY42 306 aaPredicted RBP9.52□□□□□ -0.89
RBM39-209ENST00000416529 KIAA1551Q9HCM1 1747 aa9.52□□□□□ -0.89
RBM39-209ENST00000416529 GPR108Q9NPR9 543 aa9.52□□□□□ -0.89
RBM39-209ENST00000416529 LEMD3Q9Y2U8 911 aa9.52□□□□□ -0.89
RBM39-209ENST00000416529 COG6Q9Y2V7 657 aa9.52□□□□□ -0.89
RBM39-209ENST00000416529 FAM177BA6PVY3 158 aa9.51□□□□□ -0.89
RBM39-209ENST00000416529 RAB11FIP3O75154 756 aa9.51□□□□□ -0.89
RBM39-209ENST00000416529 CD46P15529 392 aa9.51□□□□□ -0.89
RBM39-209ENST00000416529 IL15P40933 162 aaPredicted RBP9.51□□□□□ -0.89
RBM39-209ENST00000416529 HDAC1Q13547 482 aaPredicted RBP9.51□□□□□ -0.89
RBM39-209ENST00000416529 TAF7LQ5H9L4 462 aa9.51□□□□□ -0.89
RBM39-209ENST00000416529 BRICD5Q6PL45 260 aa9.51□□□□□ -0.89
RBM39-209ENST00000416529 TRIM67Q6ZTA4 783 aa9.51□□□□□ -0.89
RBM39-209ENST00000416529 C15orf52Q6ZUT6 534 aaKnown RBP9.51□□□□□ -0.89
RBM39-209ENST00000416529 TNS4Q8IZW8 715 aa9.51□□□□□ -0.89
RBM39-209ENST00000416529 C7orf43Q8WVR3 580 aa9.51□□□□□ -0.89
RBM39-209ENST00000416529 ZNF622Q969S3 477 aaKnown RBP eCLIP9.51□□□□□ -0.89
RBM39-209ENST00000416529 EYA3Q99504 573 aa9.51□□□□□ -0.89
RBM39-209ENST00000416529 BICC1Q9H694 974 aaKnown RBP9.51□□□□□ -0.89
RBM39-209ENST00000416529 AKAP2Q9Y2D5 859 aa9.51□□□□□ -0.89
RBM39-209ENST00000416529 LRRFIP2Q9Y608 721 aaKnown RBP9.51□□□□□ -0.89
RBM39-209ENST00000416529 XDHP47989 1333 aa9.51□□□□□ -0.89
RBM39-209ENST00000416529 EYA2O00167 538 aa9.5□□□□□ -0.89
RBM39-209ENST00000416529 LCE2BO14633 110 aa9.5□□□□□ -0.89
RBM39-209ENST00000416529 SRGAP3O43295 1099 aa9.5□□□□□ -0.89
RBM39-209ENST00000416529 KDM4AO75164 1064 aa9.5□□□□□ -0.89
RBM39-209ENST00000416529 ATP2B4P23634 1241 aa9.5□□□□□ -0.89
RBM39-209ENST00000416529 CLCN1P35523 988 aa9.5□□□□□ -0.89
RBM39-209ENST00000416529 HTRA3P83110 453 aa9.5□□□□□ -0.89
RBM39-209ENST00000416529 UBE4AQ14139 1066 aa9.5□□□□□ -0.89
RBM39-209ENST00000416529 PRPF40BQ6NWY9 871 aaKnown RBP9.5□□□□□ -0.89
RBM39-209ENST00000416529 TMED8Q6PL24 325 aaPredicted RBP9.5□□□□□ -0.89
RBM39-209ENST00000416529 LDHAL6AQ6ZMR3 332 aa9.5□□□□□ -0.89
RBM39-209ENST00000416529 GCC1Q96CN9 775 aa9.5□□□□□ -0.89
RBM39-209ENST00000416529 GREM2Q9H772 168 aa9.5□□□□□ -0.89
RBM39-209ENST00000416529 LRRC37AA6NMS7 1700 aa9.5□□□□□ -0.89
RBM39-209ENST00000416529 A0A0G2JLW4 131 aa9.49□□□□□ -0.89
RBM39-209ENST00000416529 ZBTB24O43167 697 aaPredicted RBP9.49□□□□□ -0.89
RBM39-209ENST00000416529 PLIN1O60240 522 aa9.49□□□□□ -0.89
RBM39-209ENST00000416529 RFX5P48382 616 aaPredicted RBP9.49□□□□□ -0.89
RBM39-209ENST00000416529 PTPN12Q05209 780 aaKnown RBP9.49□□□□□ -0.89
RBM39-209ENST00000416529 G3BP1Q13283 466 aaKnown RBP eCLIP9.49□□□□□ -0.89
RBM39-209ENST00000416529 COL13A1Q5TAT6 717 aaPredicted RBP9.49□□□□□ -0.89
RBM39-209ENST00000416529 CEP85Q6P2H3 762 aa9.49□□□□□ -0.89
RBM39-209ENST00000416529 MPNDQ8N594 471 aa9.49□□□□□ -0.89
RBM39-209ENST00000416529 KRI1Q8N9T8 703 aaKnown RBP9.49□□□□□ -0.89
RBM39-209ENST00000416529 RWDD1Q9H446 243 aaPredicted RBP9.49□□□□□ -0.89
RBM39-209ENST00000416529 FCF1Q9Y324 198 aaKnown RBP9.49□□□□□ -0.89
RBM39-209ENST00000416529 TNRC6CQ9HCJ0 1690 aaKnown RBP9.48□□□□□ -0.89
RBM39-209ENST00000416529 COL11A2P13942 1736 aaPredicted RBP9.48□□□□□ -0.89
RBM39-209ENST00000416529 GDF9O60383 454 aa9.48□□□□□ -0.89
RBM39-209ENST00000416529 CHRNA5P30532 468 aa9.48□□□□□ -0.89
RBM39-209ENST00000416529 FKBP4Q02790 459 aaKnown RBP eCLIP9.48□□□□□ -0.89
RBM39-209ENST00000416529 PLA2G2CQ5R387 149 aa9.48□□□□□ -0.89
RBM39-209ENST00000416529 TICAM2Q86XR7 235 aa9.48□□□□□ -0.89
RBM39-209ENST00000416529 C16orf71Q8IYS4 520 aaPredicted RBP9.48□□□□□ -0.89
RBM39-209ENST00000416529 SYNE4Q8N205 404 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms