RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 SP3Q02447 781 aa19.59■□□□□ 0.73
SBDSP1-201ENST00000415772 SUCLG2Q96I99 432 aa19.59■□□□□ 0.73
SBDSP1-201ENST00000415772 IQSEC3Q9UPP2 1182 aaPredicted RBP19.59■□□□□ 0.73
SBDSP1-201ENST00000415772 TBC1D22AQ8WUA7 517 aa19.58■□□□□ 0.72
SBDSP1-201ENST00000415772 FAM84BQ96KN1 310 aaPredicted RBP19.58■□□□□ 0.72
SBDSP1-201ENST00000415772 PUS3Q9BZE2 481 aaKnown RBP19.58■□□□□ 0.72
SBDSP1-201ENST00000415772 AOX1Q06278 1338 aa19.57■□□□□ 0.72
SBDSP1-201ENST00000415772 GCC1Q96CN9 775 aa19.57■□□□□ 0.72
SBDSP1-201ENST00000415772 HOOK2Q96ED9 719 aa19.57■□□□□ 0.72
SBDSP1-201ENST00000415772 ZFYVE28Q9HCC9 887 aa19.57■□□□□ 0.72
SBDSP1-201ENST00000415772 SPINK5Q9NQ38 1064 aaPredicted RBP19.57■□□□□ 0.72
SBDSP1-201ENST00000415772 GJA5P36382 358 aa19.56■□□□□ 0.72
SBDSP1-201ENST00000415772 GTF2A2P52657 109 aa19.56■□□□□ 0.72
SBDSP1-201ENST00000415772 MAP3K9P80192 1104 aa19.56■□□□□ 0.72
SBDSP1-201ENST00000415772 TAF1CQ15572 869 aaPredicted RBP19.56■□□□□ 0.72
SBDSP1-201ENST00000415772 TEKT1Q969V4 418 aa19.56■□□□□ 0.72
SBDSP1-201ENST00000415772 TMEM39BQ9GZU3 492 aa19.56■□□□□ 0.72
SBDSP1-201ENST00000415772 BICC1Q9H694 974 aaKnown RBP19.56■□□□□ 0.72
SBDSP1-201ENST00000415772 PTPN22Q9Y2R2 807 aa19.56■□□□□ 0.72
SBDSP1-201ENST00000415772 ARAP2Q8WZ64 1704 aa19.56■□□□□ 0.72
SBDSP1-201ENST00000415772 MAST3O60307 1309 aa19.55■□□□□ 0.72
SBDSP1-201ENST00000415772 CCL15-CCL14A0A0B4J2E2 113 aa19.55■□□□□ 0.72
SBDSP1-201ENST00000415772 NBPF7P0C2Y1 421 aaPredicted RBP19.55■□□□□ 0.72
SBDSP1-201ENST00000415772 CCL15Q16663 113 aa19.55■□□□□ 0.72
SBDSP1-201ENST00000415772 OTUD5Q96G74 571 aa19.55■□□□□ 0.72
SBDSP1-201ENST00000415772 TMEM106CQ9BVX2 250 aa19.55■□□□□ 0.72
SBDSP1-201ENST00000415772 IFIT1P09914 478 aaKnown RBP19.54■□□□□ 0.72
SBDSP1-201ENST00000415772 VGLL4Q14135 290 aa19.54■□□□□ 0.72
SBDSP1-201ENST00000415772 RIPOR2Q9Y4F9 1068 aa19.54■□□□□ 0.72
SBDSP1-201ENST00000415772 LAMB1P07942 1786 aa19.53■□□□□ 0.72
SBDSP1-201ENST00000415772 TESPA1A2RU30 521 aaPredicted RBP19.53■□□□□ 0.72
SBDSP1-201ENST00000415772 HDLBPQ00341 1268 aaKnown RBP19.53■□□□□ 0.72
SBDSP1-201ENST00000415772 KIF22Q14807 665 aa19.53■□□□□ 0.72
SBDSP1-201ENST00000415772 NBPF11Q86T75 865 aa19.53■□□□□ 0.72
SBDSP1-201ENST00000415772 PTPN18Q99952 460 aa19.53■□□□□ 0.72
SBDSP1-201ENST00000415772 OTOFQ9HC10 1997 aa19.52■□□□□ 0.72
SBDSP1-201ENST00000415772 PDE8BO95263 885 aa19.52■□□□□ 0.72
SBDSP1-201ENST00000415772 LRRC24Q50LG9 513 aa19.52■□□□□ 0.72
SBDSP1-201ENST00000415772 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.52■□□□□ 0.72
SBDSP1-201ENST00000415772 FBXO33Q7Z6M2 555 aa19.52■□□□□ 0.72
SBDSP1-201ENST00000415772 TEPSINQ96N21 525 aa19.52■□□□□ 0.72
SBDSP1-201ENST00000415772 POTEFA5A3E0 1075 aa19.51■□□□□ 0.71
SBDSP1-201ENST00000415772 CACNB3P54284 484 aa19.51■□□□□ 0.71
SBDSP1-201ENST00000415772 SLC9C1Q4G0N8 1177 aa19.51■□□□□ 0.71
SBDSP1-201ENST00000415772 DCAF15Q66K64 600 aa19.51■□□□□ 0.71
SBDSP1-201ENST00000415772 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.51■□□□□ 0.71
SBDSP1-201ENST00000415772 CNKSR2Q8WXI2 1034 aa19.51■□□□□ 0.71
SBDSP1-201ENST00000415772 WRNIP1Q96S55 665 aa19.51■□□□□ 0.71
SBDSP1-201ENST00000415772 UTYO14607 1347 aa19.51■□□□□ 0.71
SBDSP1-201ENST00000415772 PTPRCP08575 1304 aa19.51■□□□□ 0.71
SBDSP1-201ENST00000415772 PDE4DIPQ5VU43 2346 aa19.5■□□□□ 0.71
SBDSP1-201ENST00000415772 CETPP11597 493 aa19.5■□□□□ 0.71
SBDSP1-201ENST00000415772 PUM3Q15397 648 aaKnown RBP19.5■□□□□ 0.71
SBDSP1-201ENST00000415772 CDAN1Q8IWY9 1227 aa19.5■□□□□ 0.71
SBDSP1-201ENST00000415772 BRI3BPQ8WY22 251 aa19.5■□□□□ 0.71
SBDSP1-201ENST00000415772 KAZALD1Q96I82 304 aa19.5■□□□□ 0.71
SBDSP1-201ENST00000415772 MS4A4AQ96JQ5 239 aa19.5■□□□□ 0.71
SBDSP1-201ENST00000415772 SLC5A1P13866 664 aa19.49■□□□□ 0.71
SBDSP1-201ENST00000415772 BCAMP50895 628 aa19.49■□□□□ 0.71
SBDSP1-201ENST00000415772 SLC4A8Q2Y0W8 1093 aa19.49■□□□□ 0.71
SBDSP1-201ENST00000415772 RABL6Q3YEC7 729 aaPredicted RBP19.49■□□□□ 0.71
SBDSP1-201ENST00000415772 ERO1BQ86YB8 467 aa19.49■□□□□ 0.71
SBDSP1-201ENST00000415772 SPDYE5A6NIY4 337 aa19.48■□□□□ 0.71
SBDSP1-201ENST00000415772 SNAPC2Q13487 334 aa19.48■□□□□ 0.71
SBDSP1-201ENST00000415772 GRIK5Q16478 980 aa19.48■□□□□ 0.71
SBDSP1-201ENST00000415772 FAM83AQ86UY5 434 aa19.48■□□□□ 0.71
SBDSP1-201ENST00000415772 MRPL50Q8N5N7 158 aaKnown RBP19.48■□□□□ 0.71
SBDSP1-201ENST00000415772 KLHDC4Q8TBB5 520 aa19.48■□□□□ 0.71
SBDSP1-201ENST00000415772 ARMC5Q96C12 935 aa19.48■□□□□ 0.71
SBDSP1-201ENST00000415772 ZDHHC15Q96MV8 337 aa19.48■□□□□ 0.71
SBDSP1-201ENST00000415772 SUGT1Q9Y2Z0 365 aa19.48■□□□□ 0.71
SBDSP1-201ENST00000415772 FAM43AQ8N2R8 423 aa19.47■□□□□ 0.71
SBDSP1-201ENST00000415772 ANKRD44Q8N8A2 993 aa19.47■□□□□ 0.71
SBDSP1-201ENST00000415772 WDR66Q8TBY9 1149 aa19.47■□□□□ 0.71
SBDSP1-201ENST00000415772 EN2P19622 333 aaPredicted RBP19.46■□□□□ 0.71
SBDSP1-201ENST00000415772 FKBP1CQ5VVH2 108 aa19.46■□□□□ 0.71
SBDSP1-201ENST00000415772 ZKSCAN4Q969J2 545 aaPredicted RBP19.46■□□□□ 0.71
SBDSP1-201ENST00000415772 MRIQ9BWK5 157 aa19.46■□□□□ 0.71
SBDSP1-201ENST00000415772 ZNF341Q9BYN7 854 aa19.46■□□□□ 0.71
SBDSP1-201ENST00000415772 PTCH2Q9Y6C5 1203 aa19.46■□□□□ 0.71
SBDSP1-201ENST00000415772 MYCP01106 439 aaPredicted RBP19.45■□□□□ 0.7
SBDSP1-201ENST00000415772 HHIPL2Q6UWX4 724 aa19.45■□□□□ 0.7
SBDSP1-201ENST00000415772 VGLL2Q8N8G2 317 aa19.45■□□□□ 0.7
SBDSP1-201ENST00000415772 ZCCHC17Q9NP64 241 aaKnown RBP19.45■□□□□ 0.7
SBDSP1-201ENST00000415772 GNL3LQ9NVN8 582 aaKnown RBP19.45■□□□□ 0.7
SBDSP1-201ENST00000415772 SNCAIPQ9Y6H5 919 aa19.45■□□□□ 0.7
SBDSP1-201ENST00000415772 KIF16BQ96L93 1317 aa19.45■□□□□ 0.7
SBDSP1-201ENST00000415772 E9PSI1 815 aa19.44■□□□□ 0.7
SBDSP1-201ENST00000415772 TLR2O60603 784 aa19.44■□□□□ 0.7
SBDSP1-201ENST00000415772 PPIL2Q13356 520 aa19.44■□□□□ 0.7
SBDSP1-201ENST00000415772 LPIN2Q92539 896 aa19.44■□□□□ 0.7
SBDSP1-201ENST00000415772 RBBP6Q7Z6E9 1792 aaKnown RBP19.43■□□□□ 0.7
SBDSP1-201ENST00000415772 EYA2O00167 538 aa19.43■□□□□ 0.7
SBDSP1-201ENST00000415772 IRF6O14896 467 aa19.43■□□□□ 0.7
SBDSP1-201ENST00000415772 ECM2O94769 699 aaPredicted RBP19.43■□□□□ 0.7
SBDSP1-201ENST00000415772 APOBEC3HQ6NTF7 200 aaKnown RBP19.43■□□□□ 0.7
SBDSP1-201ENST00000415772 MIGA2Q7L4E1 593 aa19.43■□□□□ 0.7
SBDSP1-201ENST00000415772 ZNF333Q96JL9 665 aa19.43■□□□□ 0.7
SBDSP1-201ENST00000415772 BTBD19C9JJ37 291 aa19.42■□□□□ 0.7
SBDSP1-201ENST00000415772 PPATQ06203 517 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms