RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 GGA3Q9NZ52 723 aa6.79□□□□□ -1.32
PRDM2-206ENST00000413440 ZKSCAN1P17029 563 aaPredicted RBP6.79□□□□□ -1.32
PRDM2-206ENST00000413440 IL15P40933 162 aaPredicted RBP6.79□□□□□ -1.32
PRDM2-206ENST00000413440 RALYLQ86SE5 291 aaKnown RBP6.79□□□□□ -1.32
PRDM2-206ENST00000413440 ADARB2Q9NS39 739 aaKnown RBP6.79□□□□□ -1.32
PRDM2-206ENST00000413440 AATFQ9NY61 560 aaKnown RBP eCLIP6.79□□□□□ -1.32
PRDM2-206ENST00000413440 GOLGA6L3A6NEY3 463 aa6.79□□□□□ -1.32
PRDM2-206ENST00000413440 CHADLQ6NUI6 762 aa6.79□□□□□ -1.32
PRDM2-206ENST00000413440 TNS4Q8IZW8 715 aa6.79□□□□□ -1.32
PRDM2-206ENST00000413440 ZNF784Q8NCA9 323 aaPredicted RBP6.79□□□□□ -1.32
PRDM2-206ENST00000413440 WDR66Q8TBY9 1149 aa6.79□□□□□ -1.32
PRDM2-206ENST00000413440 ZNHIT6Q9NWK9 470 aaKnown RBP6.79□□□□□ -1.32
PRDM2-206ENST00000413440 SLU7O95391 586 aaKnown RBP6.78□□□□□ -1.32
PRDM2-206ENST00000413440 CT47B1P0C2W7 299 aaPredicted RBP6.78□□□□□ -1.32
PRDM2-206ENST00000413440 ZNF287Q9HBT7 754 aa6.78□□□□□ -1.32
PRDM2-206ENST00000413440 KDRP35968 1356 aa6.78□□□□□ -1.32
PRDM2-206ENST00000413440 PDE3AQ14432 1141 aa6.78□□□□□ -1.32
PRDM2-206ENST00000413440 TTF1Q15361 905 aaPredicted RBP6.78□□□□□ -1.32
PRDM2-206ENST00000413440 SF3A1Q15459 793 aaKnown RBP6.78□□□□□ -1.32
PRDM2-206ENST00000413440 APOBEC3FQ8IUX4 373 aaKnown RBP6.78□□□□□ -1.32
PRDM2-206ENST00000413440 NWD2Q9ULI1 1742 aa6.78□□□□□ -1.32
PRDM2-206ENST00000413440 KDM6AO15550 1401 aaPredicted RBP6.78□□□□□ -1.32
PRDM2-206ENST00000413440 NBPF26B4DH59 902 aa6.78□□□□□ -1.32
PRDM2-206ENST00000413440 RANBP6O60518 1105 aaKnown RBP6.78□□□□□ -1.32
PRDM2-206ENST00000413440 NBPF10Q6P3W6 841 aaKnown RBP6.78□□□□□ -1.32
PRDM2-206ENST00000413440 NBPF15Q8N660 670 aa6.78□□□□□ -1.32
PRDM2-206ENST00000413440 CRAMP1Q96RY5 1269 aa6.78□□□□□ -1.32
PRDM2-206ENST00000413440 ELP3Q9H9T3 547 aa6.78□□□□□ -1.32
PRDM2-206ENST00000413440 ATP6V0A2Q9Y487 856 aa6.78□□□□□ -1.32
PRDM2-206ENST00000413440 MON2Q7Z3U7 1717 aa6.78□□□□□ -1.32
PRDM2-206ENST00000413440 SYCP1Q15431 976 aa6.78□□□□□ -1.32
PRDM2-206ENST00000413440 HS1BP3Q53T59 392 aa6.78□□□□□ -1.32
PRDM2-206ENST00000413440 MEIS3Q99687 375 aa6.78□□□□□ -1.32
PRDM2-206ENST00000413440 IVNS1ABPQ9Y6Y0 642 aa6.78□□□□□ -1.32
PRDM2-206ENST00000413440 ABCC6O95255 1503 aa6.78□□□□□ -1.32
PRDM2-206ENST00000413440 TPM1P09493 284 aa6.77□□□□□ -1.32
PRDM2-206ENST00000413440 MRPS9P82933 396 aaKnown RBP6.77□□□□□ -1.32
PRDM2-206ENST00000413440 TRIM29Q14134 588 aa6.77□□□□□ -1.32
PRDM2-206ENST00000413440 DEFB115Q30KQ5 88 aa6.77□□□□□ -1.32
PRDM2-206ENST00000413440 NUP133Q8WUM0 1156 aa6.77□□□□□ -1.32
PRDM2-206ENST00000413440 NPC1L1Q9UHC9 1359 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 VAMP4O75379 141 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 SYAP1Q96A49 352 aaPredicted RBP6.77□□□□□ -1.33
PRDM2-206ENST00000413440 COA1Q9GZY4 146 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 SLC4A4Q9Y6R1 1079 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 RARSP54136 660 aaKnown RBP6.77□□□□□ -1.33
PRDM2-206ENST00000413440 ELMSAN1Q6PJG2 1045 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 LDHDQ86WU2 507 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 TBC1D22AQ8WUA7 517 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 TGFBRAP1Q8WUH2 860 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 GLIS2Q9BZE0 524 aaPredicted RBP6.77□□□□□ -1.33
PRDM2-206ENST00000413440 ZHX3Q9H4I2 956 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 RBM28Q9NW13 759 aaKnown RBP6.77□□□□□ -1.33
PRDM2-206ENST00000413440 VPS37CA5D8V6 355 aaPredicted RBP6.77□□□□□ -1.33
PRDM2-206ENST00000413440 RIOK3O14730 519 aaKnown RBP6.77□□□□□ -1.33
PRDM2-206ENST00000413440 PTMSP20962 102 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 OSBPP22059 807 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 HTRA3P83110 453 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 CCDC70Q6NSX1 233 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 AS3MTQ9HBK9 375 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 TMEM88BA6NKF7 163 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 EPS15P42566 896 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 DDX49Q9Y6V7 483 aaKnown RBP6.77□□□□□ -1.33
PRDM2-206ENST00000413440 DOT1LQ8TEK3 1739 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 NFAT5O94916 1531 aa6.77□□□□□ -1.33
PRDM2-206ENST00000413440 PLEKHG2Q9H7P9 1386 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 CDC37L1Q7L3B6 337 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 MAPKAPK5Q8IW41 473 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 KIF1BPQ96EK5 621 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 OTUD5Q96G74 571 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 XAGE2Q96GT9 111 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 PCMTD1Q96MG8 357 aaPredicted RBP6.76□□□□□ -1.33
PRDM2-206ENST00000413440 NAPBQ9H115 298 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 MCM9Q9NXL9 1143 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 PRC1O43663 620 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 SRGNP10124 158 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 PLCG2P16885 1265 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 CACNB3P54284 484 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 LPIN2Q92539 896 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 PDCL3Q9H2J4 239 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 BSDC1Q9NW68 430 aaPredicted RBP6.76□□□□□ -1.33
PRDM2-206ENST00000413440 COMMD10Q9Y6G5 202 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 TRIM75PA6NK02 468 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 TIMM10P62072 90 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 SREBF2Q12772 1141 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 LRRC24Q50LG9 513 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 CHD1LQ86WJ1 897 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 TRIM22Q8IYM9 498 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 CCDC82Q8N4S0 544 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 ANKRD20A12PQ8NF67 263 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 CFAP36Q96G28 342 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 NOD1Q9Y239 953 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 ALS2Q96Q42 1657 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 COL22A1Q8NFW1 1626 aaPredicted RBP6.76□□□□□ -1.33
PRDM2-206ENST00000413440 TOPAZ1Q8N9V7 1692 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 TSPY3P0CV98 308 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 TSPY8P0CW00 308 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 RSBN1LQ6PCB5 846 aaPredicted RBP6.76□□□□□ -1.33
PRDM2-206ENST00000413440 GCC1Q96CN9 775 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 MYOZ2Q9NPC6 264 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms