RNA–Protein interactions for RNA: ENST00000412844.6

NR1I3-208, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-208ENST00000412844 NBPF15Q8N660 670 aa9.29□□□□□ -0.92
NR1I3-208ENST00000412844 SMC1BQ8NDV3 1235 aa9.29□□□□□ -0.92
NR1I3-208ENST00000412844 SLC4A9Q96Q91 983 aa9.29□□□□□ -0.92
NR1I3-208ENST00000412844 TNRC6CQ9HCJ0 1690 aaKnown RBP9.29□□□□□ -0.92
NR1I3-208ENST00000412844 PCNTO95613 3336 aa9.28□□□□□ -0.92
NR1I3-208ENST00000412844 TONSLQ96HA7 1378 aa9.28□□□□□ -0.92
NR1I3-208ENST00000412844 HSP90AB1P08238 724 aaKnown RBP9.28□□□□□ -0.92
NR1I3-208ENST00000412844 B4GALNT3Q6L9W6 998 aa9.28□□□□□ -0.92
NR1I3-208ENST00000412844 TMEM214Q6NUQ4 689 aaKnown RBP9.28□□□□□ -0.92
NR1I3-208ENST00000412844 IFNL2Q8IZJ0 200 aa9.28□□□□□ -0.92
NR1I3-208ENST00000412844 USHBP1Q8N6Y0 703 aa9.28□□□□□ -0.92
NR1I3-208ENST00000412844 LINC00116Q8NCU8 138 aa9.28□□□□□ -0.92
NR1I3-208ENST00000412844 TESK2Q96S53 571 aa9.28□□□□□ -0.92
NR1I3-208ENST00000412844 SIN3AQ96ST3 1273 aa9.28□□□□□ -0.92
NR1I3-208ENST00000412844 ATP13A2Q9NQ11 1180 aa9.28□□□□□ -0.92
NR1I3-208ENST00000412844 PIM2Q9P1W9 311 aa9.28□□□□□ -0.92
NR1I3-208ENST00000412844 PARP3Q9Y6F1 533 aa9.28□□□□□ -0.92
NR1I3-208ENST00000412844 CNTNAP4Q9C0A0 1308 aa9.28□□□□□ -0.92
NR1I3-208ENST00000412844 BRCA1P38398 1863 aaKnown RBP9.28□□□□□ -0.92
NR1I3-208ENST00000412844 TTLL8A6PVC2 850 aa9.27□□□□□ -0.93
NR1I3-208ENST00000412844 RFC4P35249 363 aa9.27□□□□□ -0.93
NR1I3-208ENST00000412844 HSP90AB2PQ58FF8 381 aa9.27□□□□□ -0.93
NR1I3-208ENST00000412844 TRIM46Q7Z4K8 759 aa9.27□□□□□ -0.93
NR1I3-208ENST00000412844 ZFP42Q96MM3 310 aa9.27□□□□□ -0.93
NR1I3-208ENST00000412844 ZSCAN10Q96SZ4 725 aaPredicted RBP9.27□□□□□ -0.93
NR1I3-208ENST00000412844 NMRK2Q9NPI5 230 aa9.27□□□□□ -0.93
NR1I3-208ENST00000412844 CHMP3Q9Y3E7 222 aa9.27□□□□□ -0.93
NR1I3-208ENST00000412844 C4AP0C0L4 1744 aa9.27□□□□□ -0.93
NR1I3-208ENST00000412844 KIAA1551Q9HCM1 1747 aa9.27□□□□□ -0.93
NR1I3-208ENST00000412844 KIF20BQ96Q89 1820 aa9.26□□□□□ -0.93
NR1I3-208ENST00000412844 TMEM88BA6NKF7 163 aa9.26□□□□□ -0.93
NR1I3-208ENST00000412844 ERVV-2B6SEH9 535 aa9.26□□□□□ -0.93
NR1I3-208ENST00000412844 CTSOP43234 321 aaPredicted RBP9.26□□□□□ -0.93
NR1I3-208ENST00000412844 RNF144AP50876 292 aaPredicted RBP9.26□□□□□ -0.93
NR1I3-208ENST00000412844 DALRD3Q5D0E6 543 aaKnown RBP9.26□□□□□ -0.93
NR1I3-208ENST00000412844 GNASQ5JWF2 1037 aa9.26□□□□□ -0.93
NR1I3-208ENST00000412844 C9orf131Q5VYM1 1079 aa9.26□□□□□ -0.93
NR1I3-208ENST00000412844 AMIGO3Q86WK7 504 aa9.26□□□□□ -0.93
NR1I3-208ENST00000412844 DCAF5Q96JK2 942 aa9.26□□□□□ -0.93
NR1I3-208ENST00000412844 KDRP35968 1356 aa9.25□□□□□ -0.93
NR1I3-208ENST00000412844 N4BP2Q86UW6 1770 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-208ENST00000412844 ST20-MTHFSA0A0A6YYL1 179 aa9.25□□□□□ -0.93
NR1I3-208ENST00000412844 A0A0G2JLW4 131 aa9.25□□□□□ -0.93
NR1I3-208ENST00000412844 RPS6KA4O75676 772 aa9.25□□□□□ -0.93
NR1I3-208ENST00000412844 DPEP1P16444 411 aa9.25□□□□□ -0.93
NR1I3-208ENST00000412844 ITPK1Q13572 414 aa9.25□□□□□ -0.93
NR1I3-208ENST00000412844 COL13A1Q5TAT6 717 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-208ENST00000412844 CLP1Q92989 425 aaKnown RBP9.25□□□□□ -0.93
NR1I3-208ENST00000412844 GGNBP2Q9H3C7 697 aa9.25□□□□□ -0.93
NR1I3-208ENST00000412844 SENP2Q9HC62 589 aa9.25□□□□□ -0.93
NR1I3-208ENST00000412844 SCHIP1Q9P0W5 487 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-208ENST00000412844 WWC3Q9ULE0 1092 aa9.25□□□□□ -0.93
NR1I3-208ENST00000412844 HRH3Q9Y5N1 445 aa9.25□□□□□ -0.93
NR1I3-208ENST00000412844 WASHC2AQ641Q2 1341 aa9.25□□□□□ -0.93
NR1I3-208ENST00000412844 ANKRD26Q9UPS8 1709 aa9.25□□□□□ -0.93
NR1I3-208ENST00000412844 CDK2AP1O14519 115 aa9.24□□□□□ -0.93
NR1I3-208ENST00000412844 MAN1A2O60476 641 aa9.24□□□□□ -0.93
NR1I3-208ENST00000412844 PRMT3O60678 531 aa9.24□□□□□ -0.93
NR1I3-208ENST00000412844 GYS1P13807 737 aa9.24□□□□□ -0.93
NR1I3-208ENST00000412844 PHKG2P15735 406 aa9.24□□□□□ -0.93
NR1I3-208ENST00000412844 MTFR1Q15390 333 aa9.24□□□□□ -0.93
NR1I3-208ENST00000412844 ATG3Q9NT62 314 aa9.24□□□□□ -0.93
NR1I3-208ENST00000412844 ASAP1Q9ULH1 1129 aa9.24□□□□□ -0.93
NR1I3-208ENST00000412844 CLSPNQ9HAW4 1339 aa9.24□□□□□ -0.93
NR1I3-208ENST00000412844 LGR5O75473 907 aa9.23□□□□□ -0.93
NR1I3-208ENST00000412844 VEGFAP15692 232 aaPredicted RBP9.23□□□□□ -0.93
NR1I3-208ENST00000412844 FBLN1P23142 703 aa9.23□□□□□ -0.93
NR1I3-208ENST00000412844 ATP2B4P23634 1241 aa9.23□□□□□ -0.93
NR1I3-208ENST00000412844 EPHA4P54764 986 aa9.23□□□□□ -0.93
NR1I3-208ENST00000412844 LYSMD3Q7Z3D4 306 aa9.23□□□□□ -0.93
NR1I3-208ENST00000412844 SLC9A9Q8IVB4 645 aa9.23□□□□□ -0.93
NR1I3-208ENST00000412844 RNF217Q8TC41 542 aa9.23□□□□□ -0.93
NR1I3-208ENST00000412844 SCG3Q8WXD2 468 aaKnown RBP9.23□□□□□ -0.93
NR1I3-208ENST00000412844 KIFC2Q96AC6 838 aa9.23□□□□□ -0.93
NR1I3-208ENST00000412844 TSPAN10Q9H1Z9 355 aaPredicted RBP9.23□□□□□ -0.93
NR1I3-208ENST00000412844 RNF181Q9P0P0 153 aa9.23□□□□□ -0.93
NR1I3-208ENST00000412844 COL5A3P25940 1745 aaPredicted RBP9.22□□□□□ -0.93
NR1I3-208ENST00000412844 KCPQ6ZWJ8 1503 aa9.22□□□□□ -0.93
NR1I3-208ENST00000412844 CARNS1A5YM72 827 aa9.22□□□□□ -0.93
NR1I3-208ENST00000412844 PPP1R12BO60237 982 aaPredicted RBP9.22□□□□□ -0.93
NR1I3-208ENST00000412844 AMOTQ4VCS5 1084 aa9.22□□□□□ -0.93
NR1I3-208ENST00000412844 FOXD4L5Q5VV16 416 aaPredicted RBP9.22□□□□□ -0.93
NR1I3-208ENST00000412844 PRICKLE2Q7Z3G6 844 aa9.22□□□□□ -0.93
NR1I3-208ENST00000412844 GAS2L2Q8NHY3 880 aa9.22□□□□□ -0.93
NR1I3-208ENST00000412844 RHBDD1Q8TEB9 315 aa9.22□□□□□ -0.93
NR1I3-208ENST00000412844 VTI1AQ96AJ9 217 aa9.22□□□□□ -0.93
NR1I3-208ENST00000412844 TRAIPQ9BWF2 469 aa9.22□□□□□ -0.93
NR1I3-208ENST00000412844 NIFKQ9BYG3 293 aaKnown RBP9.22□□□□□ -0.93
NR1I3-208ENST00000412844 GRIP2Q9C0E4 1043 aa9.22□□□□□ -0.93
NR1I3-208ENST00000412844 KDM6AO15550 1401 aaPredicted RBP9.22□□□□□ -0.93
NR1I3-208ENST00000412844 FIGNL2A6NMB9 653 aa9.21□□□□□ -0.94
NR1I3-208ENST00000412844 LMNB1P20700 586 aa9.21□□□□□ -0.94
NR1I3-208ENST00000412844 KCNA3P22001 575 aa9.21□□□□□ -0.94
NR1I3-208ENST00000412844 PSMA6P60900 246 aaKnown RBP9.21□□□□□ -0.94
NR1I3-208ENST00000412844 TBCELQ5QJ74 424 aa9.21□□□□□ -0.94
NR1I3-208ENST00000412844 PRIMPOLQ96LW4 560 aa9.21□□□□□ -0.94
NR1I3-208ENST00000412844 RRAGCQ9HB90 399 aa9.21□□□□□ -0.94
NR1I3-208ENST00000412844 DACH1Q9UI36 760 aa9.21□□□□□ -0.94
NR1I3-208ENST00000412844 ZNF232Q9UNY5 417 aa9.21□□□□□ -0.94
NR1I3-208ENST00000412844 SBF1O95248 1867 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms