RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 TBC1D10BQ4KMP7 808 aaPredicted RBP5.97□□□□□ -1.45
HERC4-205ENST00000412272 CEP135Q66GS9 1140 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 MICALCLQ6ZW33 695 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 SLF2Q8IX21 1173 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 ERMNQ8TAM6 284 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 TUBGCP4Q9UGJ1 667 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 ERLIN1O75477 346 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 ROR2Q01974 943 aaKnown RBP5.97□□□□□ -1.45
HERC4-205ENST00000412272 KRT72Q14CN4 511 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 CCDC93Q567U6 631 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 DPY19L2Q6NUT2 758 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 SLC30A9Q6PML9 568 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 SLC7A5P1Q8MH63 180 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 AFAP1Q8N556 730 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 CCDC47Q96A33 483 aaKnown RBP5.97□□□□□ -1.45
HERC4-205ENST00000412272 SLC39A2Q9NP94 309 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 TRMT1Q9NXH9 659 aaKnown RBP5.97□□□□□ -1.45
HERC4-205ENST00000412272 DDX20Q9UHI6 824 aaKnown RBP5.97□□□□□ -1.45
HERC4-205ENST00000412272 EVC2Q86UK5 1308 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 VIL1P09327 827 aaKnown RBP5.97□□□□□ -1.45
HERC4-205ENST00000412272 IL4RP24394 825 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 KCNJ6P48051 423 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 MIS18BP1Q6P0N0 1132 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 TMCO3Q6UWJ1 677 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 ENOX1Q8TC92 643 aaKnown RBP5.97□□□□□ -1.45
HERC4-205ENST00000412272 MIPOL1Q8TD10 442 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 ALS2CR12Q96Q35 445 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 GORASP1Q9BQQ3 440 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 JADE2Q9NQC1 790 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 A2MP01023 1474 aa5.96□□□□□ -1.45
HERC4-205ENST00000412272 MX1P20591 662 aa5.96□□□□□ -1.45
HERC4-205ENST00000412272 HOOK3Q86VS8 718 aa5.96□□□□□ -1.45
HERC4-205ENST00000412272 LRRN4CLQ8ND94 238 aa5.96□□□□□ -1.45
HERC4-205ENST00000412272 IGSF5Q9NSI5 407 aa5.96□□□□□ -1.45
HERC4-205ENST00000412272 IQGAP3Q86VI3 1631 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 SEC31AO94979 1220 aaKnown RBP5.96□□□□□ -1.46
HERC4-205ENST00000412272 MCM2P49736 904 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 LRRC23Q53EV4 343 aaPredicted RBP5.96□□□□□ -1.46
HERC4-205ENST00000412272 SLC39A3Q9BRY0 314 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 CAPS2Q9BXY5 557 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 RSPH9Q9H1X1 276 aaPredicted RBP5.96□□□□□ -1.46
HERC4-205ENST00000412272 ATP6V0A4Q9HBG4 840 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.96□□□□□ -1.46
HERC4-205ENST00000412272 TIMM22Q9Y584 194 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 C9orf84Q5VXU9 1444 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 HECW2Q9P2P5 1572 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 FANCAO15360 1455 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 PAPOLAP51003 745 aaKnown RBP5.96□□□□□ -1.46
HERC4-205ENST00000412272 NAA25Q14CX7 972 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 FAM117BQ6P1L5 589 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 CCDC73Q6ZRK6 1079 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 FILIP1Q7Z7B0 1213 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 C11orf96Q7Z7L8 435 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 C14orf80Q86SX3 495 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 PLA2G4DQ86XP0 818 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 PLPP6Q8IY26 295 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 SLC15A3Q8IY34 581 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 C1orf131Q8NDD1 294 aaKnown RBP5.96□□□□□ -1.46
HERC4-205ENST00000412272 BATF3Q9NR55 127 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 DDX19BQ9UMR2 479 aa5.96□□□□□ -1.46
HERC4-205ENST00000412272 ABCA9Q8IUA7 1624 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 ANKRD62A6NC57 917 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 GABPB2Q8TAK5 448 aaPredicted RBP5.95□□□□□ -1.46
HERC4-205ENST00000412272 NUP133Q8WUM0 1156 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 ZFAND2BQ8WV99 257 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 GCC1Q96CN9 775 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 STK31Q9BXU1 1019 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 QPCTLQ9NXS2 382 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 ERCC6Q03468 1493 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 URB2Q14146 1524 aaKnown RBP5.95□□□□□ -1.46
HERC4-205ENST00000412272 DHX8Q14562 1220 aaKnown RBP5.95□□□□□ -1.46
HERC4-205ENST00000412272 TAF7Q15545 349 aaPredicted RBP5.95□□□□□ -1.46
HERC4-205ENST00000412272 CLIC6Q96NY7 704 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 PLEKHA4Q9H4M7 779 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 MYO6Q9UM54 1294 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 COMMD10Q9Y6G5 202 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 SMNDC1O75940 238 aaKnown RBP eCLIP5.95□□□□□ -1.46
HERC4-205ENST00000412272 TRIM37O94972 964 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 ALOX15P16050 662 aaPredicted RBP5.95□□□□□ -1.46
HERC4-205ENST00000412272 CASTP20810 708 aaKnown RBP5.95□□□□□ -1.46
HERC4-205ENST00000412272 COL19A1Q14993 1142 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 SLC4A8Q2Y0W8 1093 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 TBC1D9Q6ZT07 1266 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 PABPN1Q86U42 306 aaKnown RBP eCLIP5.95□□□□□ -1.46
HERC4-205ENST00000412272 CEP57L1Q8IYX8 460 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 HPS3Q969F9 1004 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 OSBPL10Q9BXB5 764 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 USP26Q9BXU7 913 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 FUT8Q9BYC5 575 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 NLRP2Q9NX02 1062 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 MIS18AQ9NYP9 233 aa5.95□□□□□ -1.46
HERC4-205ENST00000412272 ORC3Q9UBD5 711 aaPredicted RBP5.95□□□□□ -1.46
HERC4-205ENST00000412272 ATXN2Q99700 1313 aaKnown RBP5.95□□□□□ -1.46
HERC4-205ENST00000412272 CHD2O14647 1828 aaKnown RBP5.95□□□□□ -1.46
HERC4-205ENST00000412272 CDC45O75419 566 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 CHD1LQ86WJ1 897 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 POTEDQ86YR6 584 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 PEX5LQ8IYB4 626 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 SYCP3Q8IZU3 236 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 CCDC150Q8NCX0 1101 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms