RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 CYP11A1P05108 521 aa6.41□□□□□ -1.38
RNU4-55P-201ENST00000410731 HP1BP3Q5SSJ5 553 aaPredicted RBP6.41□□□□□ -1.38
RNU4-55P-201ENST00000410731 PI16Q6UXB8 463 aa6.41□□□□□ -1.38
RNU4-55P-201ENST00000410731 FAM20CQ8IXL6 584 aa6.41□□□□□ -1.38
RNU4-55P-201ENST00000410731 FBF1Q8TES7 1133 aa6.41□□□□□ -1.38
RNU4-55P-201ENST00000410731 TRIM56Q9BRZ2 755 aaKnown RBP6.41□□□□□ -1.38
RNU4-55P-201ENST00000410731 CYP4F12Q9HCS2 524 aa6.41□□□□□ -1.38
RNU4-55P-201ENST00000410731 STOML1Q9UBI4 398 aa6.41□□□□□ -1.38
RNU4-55P-201ENST00000410731 GAS2O43903 313 aaKnown RBP6.4□□□□□ -1.38
RNU4-55P-201ENST00000410731 MAOBP27338 520 aa6.4□□□□□ -1.38
RNU4-55P-201ENST00000410731 POU4F3Q15319 338 aa6.4□□□□□ -1.38
RNU4-55P-201ENST00000410731 EXOSC6Q5RKV6 272 aaKnown RBP6.4□□□□□ -1.38
RNU4-55P-201ENST00000410731 C7orf69Q9H7B7 122 aa6.4□□□□□ -1.38
RNU4-55P-201ENST00000410731 ZFYVE1Q9HBF4 777 aa6.4□□□□□ -1.38
RNU4-55P-201ENST00000410731 RNF112Q9ULX5 631 aa6.4□□□□□ -1.38
RNU4-55P-201ENST00000410731 SCO2A0A1W2PP80 73 aa6.39□□□□□ -1.39
RNU4-55P-201ENST00000410731 IGLV1-40P01703 118 aa6.39□□□□□ -1.39
RNU4-55P-201ENST00000410731 CTSBP07858 339 aa6.39□□□□□ -1.39
RNU4-55P-201ENST00000410731 BMP3P12645 472 aa6.39□□□□□ -1.39
RNU4-55P-201ENST00000410731 XRCC5P13010 732 aaKnown RBP6.39□□□□□ -1.39
RNU4-55P-201ENST00000410731 AP3B2Q13367 1082 aa6.39□□□□□ -1.39
RNU4-55P-201ENST00000410731 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.39□□□□□ -1.39
RNU4-55P-201ENST00000410731 CORO1BQ9BR76 489 aa6.39□□□□□ -1.39
RNU4-55P-201ENST00000410731 BCO2Q9BYV7 579 aa6.39□□□□□ -1.39
RNU4-55P-201ENST00000410731 PDIA4P13667 645 aaKnown RBP6.38□□□□□ -1.39
RNU4-55P-201ENST00000410731 MAPK8P45983 427 aa6.38□□□□□ -1.39
RNU4-55P-201ENST00000410731 FCGRTP55899 365 aa6.38□□□□□ -1.39
RNU4-55P-201ENST00000410731 FAAP100Q0VG06 881 aa6.38□□□□□ -1.39
RNU4-55P-201ENST00000410731 LRP8Q14114 963 aa6.38□□□□□ -1.39
RNU4-55P-201ENST00000410731 DTHD1Q6ZMT9 781 aa6.38□□□□□ -1.39
RNU4-55P-201ENST00000410731 CLEC10AQ8IUN9 316 aa6.38□□□□□ -1.39
RNU4-55P-201ENST00000410731 TRIM42Q8IWZ5 723 aa6.38□□□□□ -1.39
RNU4-55P-201ENST00000410731 C12orf50Q8NA57 414 aaPredicted RBP6.38□□□□□ -1.39
RNU4-55P-201ENST00000410731 FAM83CQ9BQN1 747 aa6.38□□□□□ -1.39
RNU4-55P-201ENST00000410731 PPP4R2Q9NY27 417 aa6.38□□□□□ -1.39
RNU4-55P-201ENST00000410731 HMX2A2RU54 273 aa6.37□□□□□ -1.39
RNU4-55P-201ENST00000410731 ADH5P11766 374 aa6.37□□□□□ -1.39
RNU4-55P-201ENST00000410731 NFIAQ12857 509 aa6.37□□□□□ -1.39
RNU4-55P-201ENST00000410731 SGO2Q562F6 1265 aa6.37□□□□□ -1.39
RNU4-55P-201ENST00000410731 ARTNQ5T4W7 220 aa6.37□□□□□ -1.39
RNU4-55P-201ENST00000410731 XP32Q5T750 250 aa6.37□□□□□ -1.39
RNU4-55P-201ENST00000410731 RNF43Q68DV7 783 aa6.37□□□□□ -1.39
RNU4-55P-201ENST00000410731 ALG1LQ6GMV1 187 aa6.37□□□□□ -1.39
RNU4-55P-201ENST00000410731 BEND4Q6ZU67 534 aa6.37□□□□□ -1.39
RNU4-55P-201ENST00000410731 SND1Q7KZF4 910 aaKnown RBP eCLIP6.37□□□□□ -1.39
RNU4-55P-201ENST00000410731 C2CD4AQ8NCU7 369 aaPredicted RBP6.37□□□□□ -1.39
RNU4-55P-201ENST00000410731 DBNDD2Q9BQY9 259 aa6.37□□□□□ -1.39
RNU4-55P-201ENST00000410731 KCNF1Q9H3M0 494 aa6.37□□□□□ -1.39
RNU4-55P-201ENST00000410731 ECEL1O95672 775 aa6.36□□□□□ -1.39
RNU4-55P-201ENST00000410731 MAP4P27816 1152 aaKnown RBP6.36□□□□□ -1.39
RNU4-55P-201ENST00000410731 ATP2B2Q01814 1243 aa6.36□□□□□ -1.39
RNU4-55P-201ENST00000410731 SOX4Q06945 474 aaPredicted RBP6.36□□□□□ -1.39
RNU4-55P-201ENST00000410731 NXPE4Q6UWF7 544 aa6.36□□□□□ -1.39
RNU4-55P-201ENST00000410731 SRCIN1Q9C0H9 1055 aa6.36□□□□□ -1.39
RNU4-55P-201ENST00000410731 ZFP64Q9NPA5 681 aa6.36□□□□□ -1.39
RNU4-55P-201ENST00000410731 SYNGAP1Q96PV0 1343 aa6.35□□□□□ -1.39
RNU4-55P-201ENST00000410731 P4HBP07237 508 aaKnown RBP6.35□□□□□ -1.39
RNU4-55P-201ENST00000410731 DRD2P14416 443 aa6.35□□□□□ -1.39
RNU4-55P-201ENST00000410731 PPP2R3AQ06190 1150 aa6.35□□□□□ -1.39
RNU4-55P-201ENST00000410731 AEBP1Q8IUX7 1158 aa6.35□□□□□ -1.39
RNU4-55P-201ENST00000410731 SETDB2Q96T68 719 aa6.35□□□□□ -1.39
RNU4-55P-201ENST00000410731 TMEM39AQ9NV64 488 aa6.35□□□□□ -1.39
RNU4-55P-201ENST00000410731 GPN3Q9UHW5 284 aaPredicted RBP6.35□□□□□ -1.39
RNU4-55P-201ENST00000410731 GIPC1O14908 333 aa6.34□□□□□ -1.39
RNU4-55P-201ENST00000410731 GSTT1P30711 240 aa6.34□□□□□ -1.39
RNU4-55P-201ENST00000410731 ZNF157P51786 506 aaPredicted RBP6.34□□□□□ -1.39
RNU4-55P-201ENST00000410731 PDE3AQ14432 1141 aa6.34□□□□□ -1.39
RNU4-55P-201ENST00000410731 ZDHHC13Q8IUH4 622 aa6.34□□□□□ -1.39
RNU4-55P-201ENST00000410731 C3orf58Q8NDZ4 430 aa6.34□□□□□ -1.39
RNU4-55P-201ENST00000410731 YIPF2Q9BWQ6 316 aa6.34□□□□□ -1.39
RNU4-55P-201ENST00000410731 ACTL7BQ9Y614 415 aa6.34□□□□□ -1.39
RNU4-55P-201ENST00000410731 AOC2O75106 756 aa6.33□□□□□ -1.4
RNU4-55P-201ENST00000410731 GSTP1P09211 210 aaKnown RBP6.33□□□□□ -1.4
RNU4-55P-201ENST00000410731 RXRBP28702 533 aa6.33□□□□□ -1.4
RNU4-55P-201ENST00000410731 USP11P51784 963 aa6.33□□□□□ -1.4
RNU4-55P-201ENST00000410731 HNRNPUQ00839 825 aaKnown RBP eCLIP6.33□□□□□ -1.4
RNU4-55P-201ENST00000410731 COL19A1Q14993 1142 aa6.33□□□□□ -1.4
RNU4-55P-201ENST00000410731 AKAP4Q5JQC9 854 aa6.33□□□□□ -1.4
RNU4-55P-201ENST00000410731 CDPF1Q6NVV7 123 aa6.33□□□□□ -1.4
RNU4-55P-201ENST00000410731 EZH1Q92800 747 aaPredicted RBP6.33□□□□□ -1.4
RNU4-55P-201ENST00000410731 WDR18Q9BV38 432 aa6.33□□□□□ -1.4
RNU4-55P-201ENST00000410731 RAD18Q9NS91 495 aa6.33□□□□□ -1.4
RNU4-55P-201ENST00000410731 KRT82Q9NSB4 513 aa6.33□□□□□ -1.4
RNU4-55P-201ENST00000410731 WWC3Q9ULE0 1092 aa6.33□□□□□ -1.4
RNU4-55P-201ENST00000410731 PPM1HQ9ULR3 514 aa6.33□□□□□ -1.4
RNU4-55P-201ENST00000410731 SPG7Q9UQ90 795 aa6.33□□□□□ -1.4
RNU4-55P-201ENST00000410731 AKAP2Q9Y2D5 859 aa6.33□□□□□ -1.4
RNU4-55P-201ENST00000410731 FAM95CA0A1B0GW59 222 aa6.32□□□□□ -1.4
RNU4-55P-201ENST00000410731 HYAL3O43820 417 aaPredicted RBP6.32□□□□□ -1.4
RNU4-55P-201ENST00000410731 TGFB1P01137 390 aa6.32□□□□□ -1.4
RNU4-55P-201ENST00000410731 LDHBP07195 334 aaKnown RBP6.32□□□□□ -1.4
RNU4-55P-201ENST00000410731 PAOXQ6QHF9 649 aa6.32□□□□□ -1.4
RNU4-55P-201ENST00000410731 ANKRD24Q8TF21 1146 aa6.32□□□□□ -1.4
RNU4-55P-201ENST00000410731 FBLIM1Q8WUP2 373 aa6.32□□□□□ -1.4
RNU4-55P-201ENST00000410731 OSBPL7Q9BZF2 842 aa6.32□□□□□ -1.4
RNU4-55P-201ENST00000410731 GSX1Q9H4S2 264 aaPredicted RBP6.32□□□□□ -1.4
RNU4-55P-201ENST00000410731 CCDC86Q9H6F5 360 aaKnown RBP6.32□□□□□ -1.4
RNU4-55P-201ENST00000410731 AP4E1Q9UPM8 1137 aa6.32□□□□□ -1.4
RNU4-55P-201ENST00000410731 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.31□□□□□ -1.4
RNU4-55P-201ENST00000410731 CD97P48960 835 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms