RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 TAF1CQ15572 869 aaPredicted RBP21.46■■□□□ 1.03
SCRN1-203ENST00000409570 TAF7LQ5H9L4 462 aa21.46■■□□□ 1.03
SCRN1-203ENST00000409570 DZIP1LQ8IYY4 767 aaKnown RBP21.46■■□□□ 1.03
SCRN1-203ENST00000409570 TMEM106CQ9BVX2 250 aa21.46■■□□□ 1.03
SCRN1-203ENST00000409570 CCL15-CCL14A0A0B4J2E2 113 aa21.45■■□□□ 1.02
SCRN1-203ENST00000409570 TCP10L2B9ZVM9 353 aa21.45■■□□□ 1.02
SCRN1-203ENST00000409570 GYG1P46976 350 aa21.45■■□□□ 1.02
SCRN1-203ENST00000409570 MAP3K9P80192 1104 aa21.45■■□□□ 1.02
SCRN1-203ENST00000409570 VGLL4Q14135 290 aa21.45■■□□□ 1.02
SCRN1-203ENST00000409570 UBE4AQ14139 1066 aa21.45■■□□□ 1.02
SCRN1-203ENST00000409570 CCL15Q16663 113 aa21.45■■□□□ 1.02
SCRN1-203ENST00000409570 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.45■■□□□ 1.02
SCRN1-203ENST00000409570 TMEM39BQ9GZU3 492 aa21.45■■□□□ 1.02
SCRN1-203ENST00000409570 ZFYVE28Q9HCC9 887 aa21.45■■□□□ 1.02
SCRN1-203ENST00000409570 PTCH2Q9Y6C5 1203 aa21.45■■□□□ 1.02
SCRN1-203ENST00000409570 TRIOBPQ9H2D6 2365 aa21.45■■□□□ 1.02
SCRN1-203ENST00000409570 GRM8O00222 908 aa21.44■■□□□ 1.02
SCRN1-203ENST00000409570 HIBADHP31937 336 aaKnown RBP21.44■■□□□ 1.02
SCRN1-203ENST00000409570 CRKP46108 304 aa21.44■■□□□ 1.02
SCRN1-203ENST00000409570 FXR1P51114 621 aaKnown RBP eCLIP21.44■■□□□ 1.02
SCRN1-203ENST00000409570 GTF2A2P52657 109 aa21.44■■□□□ 1.02
SCRN1-203ENST00000409570 NCBP3Q53F19 620 aaKnown RBP21.44■■□□□ 1.02
SCRN1-203ENST00000409570 FAM43AQ8N2R8 423 aa21.44■■□□□ 1.02
SCRN1-203ENST00000409570 FAM84BQ96KN1 310 aaPredicted RBP21.44■■□□□ 1.02
SCRN1-203ENST00000409570 EXOSC9Q06265 439 aaKnown RBP21.43■■□□□ 1.02
SCRN1-203ENST00000409570 SLC9C1Q4G0N8 1177 aa21.43■■□□□ 1.02
SCRN1-203ENST00000409570 ARHGEF6Q15052 776 aa21.42■■□□□ 1.02
SCRN1-203ENST00000409570 GRIK5Q16478 980 aa21.42■■□□□ 1.02
SCRN1-203ENST00000409570 NBPF11Q86T75 865 aa21.42■■□□□ 1.02
SCRN1-203ENST00000409570 OTUD5Q96G74 571 aa21.42■■□□□ 1.02
SCRN1-203ENST00000409570 PUS3Q9BZE2 481 aaKnown RBP21.42■■□□□ 1.02
SCRN1-203ENST00000409570 TNNI2P48788 182 aa21.41■■□□□ 1.02
SCRN1-203ENST00000409570 CSADQ9Y600 493 aa21.41■■□□□ 1.02
SCRN1-203ENST00000409570 MYH13Q9UKX3 1938 aa21.39■■□□□ 1.02
SCRN1-203ENST00000409570 SPDYE5A6NIY4 337 aa21.39■■□□□ 1.01
SCRN1-203ENST00000409570 SLC4A8Q2Y0W8 1093 aa21.39■■□□□ 1.01
SCRN1-203ENST00000409570 FBXO33Q7Z6M2 555 aa21.39■■□□□ 1.01
SCRN1-203ENST00000409570 ARHGAP39Q9C0H5 1083 aa21.39■■□□□ 1.01
SCRN1-203ENST00000409570 C9orf78Q9NZ63 289 aaPredicted RBP21.39■■□□□ 1.01
SCRN1-203ENST00000409570 COLQQ9Y215 455 aaPredicted RBP21.39■■□□□ 1.01
SCRN1-203ENST00000409570 RIPOR2Q9Y4F9 1068 aa21.39■■□□□ 1.01
SCRN1-203ENST00000409570 SNCAIPQ9Y6H5 919 aa21.39■■□□□ 1.01
SCRN1-203ENST00000409570 AK9Q5TCS8 1911 aa21.38■■□□□ 1.01
SCRN1-203ENST00000409570 WDR63Q8IWG1 891 aa21.38■■□□□ 1.01
SCRN1-203ENST00000409570 KAZALD1Q96I82 304 aa21.38■■□□□ 1.01
SCRN1-203ENST00000409570 SUCLG2Q96I99 432 aa21.38■■□□□ 1.01
SCRN1-203ENST00000409570 IQSEC3Q9UPP2 1182 aaPredicted RBP21.38■■□□□ 1.01
SCRN1-203ENST00000409570 TLR2O60603 784 aa21.37■■□□□ 1.01
SCRN1-203ENST00000409570 ALDH1L1O75891 902 aa21.37■■□□□ 1.01
SCRN1-203ENST00000409570 MYCP01106 439 aaPredicted RBP21.37■■□□□ 1.01
SCRN1-203ENST00000409570 CACNB3P54284 484 aa21.37■■□□□ 1.01
SCRN1-203ENST00000409570 HDLBPQ00341 1268 aaKnown RBP21.37■■□□□ 1.01
SCRN1-203ENST00000409570 SH3TC2Q8TF17 1288 aa21.37■■□□□ 1.01
SCRN1-203ENST00000409570 ZCCHC17Q9NP64 241 aaKnown RBP21.37■■□□□ 1.01
SCRN1-203ENST00000409570 BTBD19C9JJ37 291 aa21.36■■□□□ 1.01
SCRN1-203ENST00000409570 CETPP11597 493 aa21.36■■□□□ 1.01
SCRN1-203ENST00000409570 LACTBP83111 547 aaPredicted RBP21.36■■□□□ 1.01
SCRN1-203ENST00000409570 CHAF1AQ13111 956 aaPredicted RBP21.36■■□□□ 1.01
SCRN1-203ENST00000409570 ERO1BQ86YB8 467 aa21.36■■□□□ 1.01
SCRN1-203ENST00000409570 SALL2Q9Y467 1007 aaPredicted RBP21.36■■□□□ 1.01
SCRN1-203ENST00000409570 MROH5Q6ZUA9 1318 aa21.35■■□□□ 1.01
SCRN1-203ENST00000409570 ZKSCAN4Q969J2 545 aaPredicted RBP21.35■■□□□ 1.01
SCRN1-203ENST00000409570 WRNIP1Q96S55 665 aa21.35■■□□□ 1.01
SCRN1-203ENST00000409570 SPINK5Q9NQ38 1064 aaPredicted RBP21.35■■□□□ 1.01
SCRN1-203ENST00000409570 SZT2Q5T011 3432 aa21.35■■□□□ 1.01
SCRN1-203ENST00000409570 IRF6O14896 467 aa21.34■■□□□ 1.01
SCRN1-203ENST00000409570 WDHD1O75717 1129 aaPredicted RBP21.34■■□□□ 1.01
SCRN1-203ENST00000409570 KIF22Q14807 665 aa21.34■■□□□ 1.01
SCRN1-203ENST00000409570 SLC4A10Q6U841 1118 aa21.34■■□□□ 1.01
SCRN1-203ENST00000409570 VPS37DQ86XT2 251 aa21.34■■□□□ 1.01
SCRN1-203ENST00000409570 TBC1D22AQ8WUA7 517 aa21.34■■□□□ 1.01
SCRN1-203ENST00000409570 TEKT1Q969V4 418 aa21.34■■□□□ 1.01
SCRN1-203ENST00000409570 SRCIN1Q9C0H9 1055 aa21.34■■□□□ 1.01
SCRN1-203ENST00000409570 MGAMO43451 1857 aa21.34■■□□□ 1.01
SCRN1-203ENST00000409570 NBPF7P0C2Y1 421 aaPredicted RBP21.33■■□□□ 1.01
SCRN1-203ENST00000409570 PPIL2Q13356 520 aa21.33■■□□□ 1.01
SCRN1-203ENST00000409570 SNAPC2Q13487 334 aa21.33■■□□□ 1.01
SCRN1-203ENST00000409570 LRRC24Q50LG9 513 aa21.33■■□□□ 1.01
SCRN1-203ENST00000409570 FAM83AQ86UY5 434 aa21.33■■□□□ 1.01
SCRN1-203ENST00000409570 ZDHHC15Q96MV8 337 aa21.33■■□□□ 1.01
SCRN1-203ENST00000409570 H0YGN5 161 aa21.32■■□□□ 1
SCRN1-203ENST00000409570 GNRH1P01148 92 aa21.32■■□□□ 1
SCRN1-203ENST00000409570 FKBP1CQ5VVH2 108 aa21.32■■□□□ 1
SCRN1-203ENST00000409570 APOBEC3HQ6NTF7 200 aaKnown RBP21.32■■□□□ 1
SCRN1-203ENST00000409570 VGLL2Q8N8G2 317 aa21.32■■□□□ 1
SCRN1-203ENST00000409570 MRIQ9BWK5 157 aa21.32■■□□□ 1
SCRN1-203ENST00000409570 UTYO14607 1347 aa21.31■■□□□ 1
SCRN1-203ENST00000409570 FRAT2O75474 233 aaPredicted RBP21.31■■□□□ 1
SCRN1-203ENST00000409570 CTGFP29279 349 aa21.31■■□□□ 1
SCRN1-203ENST00000409570 PRMT2P55345 433 aa21.31■■□□□ 1
SCRN1-203ENST00000409570 RABL6Q3YEC7 729 aaPredicted RBP21.31■■□□□ 1
SCRN1-203ENST00000409570 CAVIN4Q5BKX8 364 aa21.31■■□□□ 1
SCRN1-203ENST00000409570 C17orf99Q6UX52 265 aa21.31■■□□□ 1
SCRN1-203ENST00000409570 TMOD2Q9NZR1 351 aa21.31■■□□□ 1
SCRN1-203ENST00000409570 RPAP1Q9BWH6 1393 aaPredicted RBP21.31■■□□□ 1
SCRN1-203ENST00000409570 BCAMP50895 628 aa21.3■■□□□ 1
SCRN1-203ENST00000409570 METTL24Q5JXM2 366 aa21.3■■□□□ 1
SCRN1-203ENST00000409570 SHISA4Q96DD7 197 aa21.3■■□□□ 1
SCRN1-203ENST00000409570 HOOK2Q96ED9 719 aa21.3■■□□□ 1
SCRN1-203ENST00000409570 BICC1Q9H694 974 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms