RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 ALG1Q9BT22 464 aa15.53■□□□□ 0.08
COL6A2-204ENST00000409416 GOLPH3LQ9H4A5 285 aa15.53■□□□□ 0.08
COL6A2-204ENST00000409416 ZSCAN16Q9H4T2 348 aaPredicted RBP15.53■□□□□ 0.08
COL6A2-204ENST00000409416 SLC4A4Q9Y6R1 1079 aa15.53■□□□□ 0.08
COL6A2-204ENST00000409416 ATP2B2Q01814 1243 aa15.53■□□□□ 0.08
COL6A2-204ENST00000409416 DDB1Q16531 1140 aa15.53■□□□□ 0.08
COL6A2-204ENST00000409416 CCDC112Q8NEF3 446 aa15.53■□□□□ 0.08
COL6A2-204ENST00000409416 SPTLC3Q9NUV7 552 aa15.53■□□□□ 0.08
COL6A2-204ENST00000409416 CLIC4Q9Y696 253 aa15.53■□□□□ 0.08
COL6A2-204ENST00000409416 ERICH2A1L162 156 aa15.53■□□□□ 0.08
COL6A2-204ENST00000409416 TUBGCP6Q96RT7 1819 aa15.53■□□□□ 0.08
COL6A2-204ENST00000409416 ARHGAP23Q9P227 1491 aa15.53■□□□□ 0.08
COL6A2-204ENST00000409416 F8W031 263 aaPredicted RBP15.52■□□□□ 0.08
COL6A2-204ENST00000409416 CYP7A1P22680 504 aa15.52■□□□□ 0.08
COL6A2-204ENST00000409416 RFX5P48382 616 aaPredicted RBP15.52■□□□□ 0.08
COL6A2-204ENST00000409416 ZNF827Q17R98 1081 aa15.52■□□□□ 0.08
COL6A2-204ENST00000409416 PRDM4Q9UKN5 801 aa15.52■□□□□ 0.08
COL6A2-204ENST00000409416 SLIT1O75093 1534 aa15.52■□□□□ 0.08
COL6A2-204ENST00000409416 ERCC3P19447 782 aa15.52■□□□□ 0.07
COL6A2-204ENST00000409416 IGHMBP2P38935 993 aaKnown RBP15.52■□□□□ 0.07
COL6A2-204ENST00000409416 STX1AQ16623 288 aa15.52■□□□□ 0.07
COL6A2-204ENST00000409416 AKAP2Q9Y2D5 859 aa15.52■□□□□ 0.07
COL6A2-204ENST00000409416 C1orf167Q5SNV9 1468 aa15.52■□□□□ 0.07
COL6A2-204ENST00000409416 MCAMP43121 646 aa15.52■□□□□ 0.07
COL6A2-204ENST00000409416 CCDC191Q8NCU4 936 aa15.52■□□□□ 0.07
COL6A2-204ENST00000409416 PIH1D3Q9NQM4 214 aaKnown RBP15.52■□□□□ 0.07
COL6A2-204ENST00000409416 UTYO14607 1347 aa15.51■□□□□ 0.07
COL6A2-204ENST00000409416 SPATA31A3Q5VYP0 1347 aa15.51■□□□□ 0.07
COL6A2-204ENST00000409416 SKILP12757 684 aa15.51■□□□□ 0.07
COL6A2-204ENST00000409416 NCOA7Q8NI08 942 aa15.51■□□□□ 0.07
COL6A2-204ENST00000409416 VAT1LQ9HCJ6 419 aa15.51■□□□□ 0.07
COL6A2-204ENST00000409416 AFMP43652 599 aa15.51■□□□□ 0.07
COL6A2-204ENST00000409416 CEP57L1Q8IYX8 460 aa15.51■□□□□ 0.07
COL6A2-204ENST00000409416 SERPINC1P01008 464 aa15.5■□□□□ 0.07
COL6A2-204ENST00000409416 STX17P56962 302 aa15.5■□□□□ 0.07
COL6A2-204ENST00000409416 SLC12A7Q9Y666 1083 aa15.5■□□□□ 0.07
COL6A2-204ENST00000409416 KDM6AO15550 1401 aaPredicted RBP15.5■□□□□ 0.07
COL6A2-204ENST00000409416 PFKFB2O60825 505 aa15.5■□□□□ 0.07
COL6A2-204ENST00000409416 HMGB1P09429 215 aaKnown RBP15.5■□□□□ 0.07
COL6A2-204ENST00000409416 PDIA3P30101 505 aaKnown RBP15.5■□□□□ 0.07
COL6A2-204ENST00000409416 CCDC102BQ68D86 513 aa15.5■□□□□ 0.07
COL6A2-204ENST00000409416 UBAC1Q9BSL1 405 aa15.5■□□□□ 0.07
COL6A2-204ENST00000409416 ATG3Q9NT62 314 aa15.5■□□□□ 0.07
COL6A2-204ENST00000409416 CTDNEP1O95476 244 aa15.5■□□□□ 0.07
COL6A2-204ENST00000409416 WDR17Q8IZU2 1322 aa15.5■□□□□ 0.07
COL6A2-204ENST00000409416 USP27XA6NNY8 438 aa15.49■□□□□ 0.07
COL6A2-204ENST00000409416 TMC6Q7Z403 805 aa15.49■□□□□ 0.07
COL6A2-204ENST00000409416 SLC51AQ86UW1 340 aa15.49■□□□□ 0.07
COL6A2-204ENST00000409416 HEG1Q9ULI3 1381 aa15.49■□□□□ 0.07
COL6A2-204ENST00000409416 KIF13AQ9H1H9 1805 aa15.49■□□□□ 0.07
COL6A2-204ENST00000409416 IARSP41252 1262 aaKnown RBP15.49■□□□□ 0.07
COL6A2-204ENST00000409416 CEP135Q66GS9 1140 aa15.49■□□□□ 0.07
COL6A2-204ENST00000409416 TDRD7Q8NHU6 1098 aaKnown RBP15.49■□□□□ 0.07
COL6A2-204ENST00000409416 ANO10Q9NW15 660 aa15.49■□□□□ 0.07
COL6A2-204ENST00000409416 CTNNA3Q9UI47 895 aa15.49■□□□□ 0.07
COL6A2-204ENST00000409416 NFAT5O94916 1531 aa15.49■□□□□ 0.07
COL6A2-204ENST00000409416 USPL1Q5W0Q7 1092 aa15.49■□□□□ 0.07
COL6A2-204ENST00000409416 MAPK8IP1Q9UQF2 711 aa15.49■□□□□ 0.07
COL6A2-204ENST00000409416 LRRFIP1Q32MZ4 808 aaKnown RBP15.48■□□□□ 0.07
COL6A2-204ENST00000409416 GRAMD1CQ8IYS0 662 aa15.48■□□□□ 0.07
COL6A2-204ENST00000409416 ZSWIM4Q9H7M6 989 aa15.48■□□□□ 0.07
COL6A2-204ENST00000409416 NCAPD2Q15021 1401 aa15.48■□□□□ 0.07
COL6A2-204ENST00000409416 H7C1W4 665 aa15.48■□□□□ 0.07
COL6A2-204ENST00000409416 PTPN14Q15678 1187 aa15.48■□□□□ 0.07
COL6A2-204ENST00000409416 CFAP100Q494V2 611 aa15.48■□□□□ 0.07
COL6A2-204ENST00000409416 FAM47AQ5JRC9 791 aa15.48■□□□□ 0.07
COL6A2-204ENST00000409416 ANKIB1Q9P2G1 1089 aa15.48■□□□□ 0.07
COL6A2-204ENST00000409416 CASP1P29466 404 aa15.48■□□□□ 0.07
COL6A2-204ENST00000409416 MAP3K12Q12852 859 aa15.48■□□□□ 0.07
COL6A2-204ENST00000409416 TRMT44Q8IYL2 757 aaKnown RBP15.48■□□□□ 0.07
COL6A2-204ENST00000409416 MRPS27Q92552 414 aaKnown RBP15.48■□□□□ 0.07
COL6A2-204ENST00000409416 SRP68Q9UHB9 627 aaKnown RBP15.48■□□□□ 0.07
COL6A2-204ENST00000409416 PCDHA7Q9UN72 937 aa15.48■□□□□ 0.07
COL6A2-204ENST00000409416 DYNLL1P63167 89 aaKnown RBP15.47■□□□□ 0.07
COL6A2-204ENST00000409416 FAM160A1Q05DH4 1040 aa15.47■□□□□ 0.07
COL6A2-204ENST00000409416 PLA2G4DQ86XP0 818 aa15.47■□□□□ 0.07
COL6A2-204ENST00000409416 ZBTB43O43298 467 aa15.47■□□□□ 0.07
COL6A2-204ENST00000409416 NDUFA8P51970 172 aa15.47■□□□□ 0.07
COL6A2-204ENST00000409416 MEX3CQ5U5Q3 659 aaKnown RBP15.47■□□□□ 0.07
COL6A2-204ENST00000409416 SUSD4Q5VX71 490 aa15.47■□□□□ 0.07
COL6A2-204ENST00000409416 NLRP10Q86W26 655 aa15.47■□□□□ 0.07
COL6A2-204ENST00000409416 TTLL11Q8NHH1 800 aa15.47■□□□□ 0.07
COL6A2-204ENST00000409416 NAT10Q9H0A0 1025 aaKnown RBP15.47■□□□□ 0.07
COL6A2-204ENST00000409416 SAFBQ15424 915 aaKnown RBP eCLIP15.46■□□□□ 0.07
COL6A2-204ENST00000409416 TSGA10IPQ3SY00 556 aa15.46■□□□□ 0.07
COL6A2-204ENST00000409416 PTF1AQ7RTS3 328 aa15.46■□□□□ 0.07
COL6A2-204ENST00000409416 NKX2-3Q8TAU0 364 aa15.46■□□□□ 0.07
COL6A2-204ENST00000409416 HELLSQ9NRZ9 838 aa15.46■□□□□ 0.07
COL6A2-204ENST00000409416 SLC5A1P13866 664 aa15.46■□□□□ 0.07
COL6A2-204ENST00000409416 MFSD6Q6ZSS7 791 aa15.46■□□□□ 0.07
COL6A2-204ENST00000409416 UTRNP46939 3433 aa15.46■□□□□ 0.07
COL6A2-204ENST00000409416 SLC3A2P08195 630 aaKnown RBP15.46■□□□□ 0.06
COL6A2-204ENST00000409416 PDE6AP16499 860 aa15.46■□□□□ 0.06
COL6A2-204ENST00000409416 CTSWP56202 376 aa15.46■□□□□ 0.06
COL6A2-204ENST00000409416 ZMYM1Q5SVZ6 1142 aa15.46■□□□□ 0.06
COL6A2-204ENST00000409416 TRMT1LQ7Z2T5 733 aaKnown RBP15.46■□□□□ 0.06
COL6A2-204ENST00000409416 TBC1D10CQ8IV04 446 aa15.46■□□□□ 0.06
COL6A2-204ENST00000409416 CDC25AP30304 524 aa15.45■□□□□ 0.06
COL6A2-204ENST00000409416 NAA16Q6N069 864 aaPredicted RBP15.45■□□□□ 0.06
COL6A2-204ENST00000409416 AATFQ9NY61 560 aaKnown RBP eCLIP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms