RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 FKBP5Q13451 457 aaPredicted RBP21.26■□□□□ 0.99
CHMP3-203ENST00000409225 MFSD14BQ5SR56 506 aa21.26■□□□□ 0.99
CHMP3-203ENST00000409225 LINS1Q8NG48 757 aa21.26■□□□□ 0.99
CHMP3-203ENST00000409225 SERPINA10Q9UK55 444 aa21.26■□□□□ 0.99
CHMP3-203ENST00000409225 ZSWIM8A7E2V4 1837 aa21.26■□□□□ 0.99
CHMP3-203ENST00000409225 ECM2O94769 699 aaPredicted RBP21.25■□□□□ 0.99
CHMP3-203ENST00000409225 FOXO4P98177 505 aa21.25■□□□□ 0.99
CHMP3-203ENST00000409225 KIF22Q14807 665 aa21.25■□□□□ 0.99
CHMP3-203ENST00000409225 DZIP1LQ8IYY4 767 aaKnown RBP21.25■□□□□ 0.99
CHMP3-203ENST00000409225 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.25■□□□□ 0.99
CHMP3-203ENST00000409225 FAM205AQ6ZU69 1335 aa21.25■□□□□ 0.99
CHMP3-203ENST00000409225 WDHD1O75717 1129 aaPredicted RBP21.24■□□□□ 0.99
CHMP3-203ENST00000409225 ZNF594Q96JF6 807 aaPredicted RBP21.24■□□□□ 0.99
CHMP3-203ENST00000409225 TLR2O60603 784 aa21.23■□□□□ 0.99
CHMP3-203ENST00000409225 TNNI2P48788 182 aa21.23■□□□□ 0.99
CHMP3-203ENST00000409225 LACTBP83111 547 aaPredicted RBP21.23■□□□□ 0.99
CHMP3-203ENST00000409225 TAF7LQ5H9L4 462 aa21.23■□□□□ 0.99
CHMP3-203ENST00000409225 CNNM1Q9NRU3 951 aa21.23■□□□□ 0.99
CHMP3-203ENST00000409225 BTBD19C9JJ37 291 aa21.22■□□□□ 0.99
CHMP3-203ENST00000409225 CETPP11597 493 aa21.22■□□□□ 0.99
CHMP3-203ENST00000409225 CRKP46108 304 aa21.22■□□□□ 0.99
CHMP3-203ENST00000409225 LMBR1LQ6UX01 489 aa21.22■□□□□ 0.99
CHMP3-203ENST00000409225 LDHAL6AQ6ZMR3 332 aa21.22■□□□□ 0.99
CHMP3-203ENST00000409225 TDRD7Q8NHU6 1098 aaKnown RBP21.22■□□□□ 0.99
CHMP3-203ENST00000409225 DPF3Q92784 378 aa21.22■□□□□ 0.99
CHMP3-203ENST00000409225 ARAP2Q8WZ64 1704 aa21.21■□□□□ 0.99
CHMP3-203ENST00000409225 SPDYE5A6NIY4 337 aa21.21■□□□□ 0.99
CHMP3-203ENST00000409225 GYG1P46976 350 aa21.21■□□□□ 0.99
CHMP3-203ENST00000409225 MTFR1Q15390 333 aa21.21■□□□□ 0.99
CHMP3-203ENST00000409225 CCDC57Q2TAC2 916 aa21.21■□□□□ 0.99
CHMP3-203ENST00000409225 RBM27Q9P2N5 1060 aaKnown RBP21.21■□□□□ 0.99
CHMP3-203ENST00000409225 SNCAIPQ9Y6H5 919 aa21.21■□□□□ 0.99
CHMP3-203ENST00000409225 SZT2Q5T011 3432 aa21.21■□□□□ 0.99
CHMP3-203ENST00000409225 EPHA10Q5JZY3 1008 aa21.2■□□□□ 0.98
CHMP3-203ENST00000409225 SHISA4Q96DD7 197 aa21.2■□□□□ 0.98
CHMP3-203ENST00000409225 GNRH1P01148 92 aa21.19■□□□□ 0.98
CHMP3-203ENST00000409225 HIBADHP31937 336 aaKnown RBP21.19■□□□□ 0.98
CHMP3-203ENST00000409225 CACNB3P54284 484 aa21.19■□□□□ 0.98
CHMP3-203ENST00000409225 SNAPC2Q13487 334 aa21.19■□□□□ 0.98
CHMP3-203ENST00000409225 ERO1BQ86YB8 467 aa21.19■□□□□ 0.98
CHMP3-203ENST00000409225 WRNIP1Q96S55 665 aa21.19■□□□□ 0.98
CHMP3-203ENST00000409225 PRKRIP1Q9H875 184 aaPredicted RBP21.19■□□□□ 0.98
CHMP3-203ENST00000409225 IRF6O14896 467 aa21.18■□□□□ 0.98
CHMP3-203ENST00000409225 PRMT2P55345 433 aa21.18■□□□□ 0.98
CHMP3-203ENST00000409225 GRIK5Q16478 980 aa21.18■□□□□ 0.98
CHMP3-203ENST00000409225 ZKSCAN4Q969J2 545 aaPredicted RBP21.18■□□□□ 0.98
CHMP3-203ENST00000409225 FAM84BQ96KN1 310 aaPredicted RBP21.18■□□□□ 0.98
CHMP3-203ENST00000409225 ZCCHC17Q9NP64 241 aaKnown RBP21.18■□□□□ 0.98
CHMP3-203ENST00000409225 F6X3S4 739 aa21.17■□□□□ 0.98
CHMP3-203ENST00000409225 CPA4Q9UI42 421 aa21.17■□□□□ 0.98
CHMP3-203ENST00000409225 CTGFP29279 349 aa21.16■□□□□ 0.98
CHMP3-203ENST00000409225 CHAF1AQ13111 956 aaPredicted RBP21.16■□□□□ 0.98
CHMP3-203ENST00000409225 UBE4AQ14139 1066 aa21.16■□□□□ 0.98
CHMP3-203ENST00000409225 SRRDQ9UH36 339 aa21.16■□□□□ 0.98
CHMP3-203ENST00000409225 IQSEC3Q9UPP2 1182 aaPredicted RBP21.16■□□□□ 0.98
CHMP3-203ENST00000409225 PSMC4P43686 418 aa21.15■□□□□ 0.98
CHMP3-203ENST00000409225 PPIL2Q13356 520 aa21.15■□□□□ 0.98
CHMP3-203ENST00000409225 BEND3Q5T5X7 828 aa21.15■□□□□ 0.98
CHMP3-203ENST00000409225 C17orf99Q6UX52 265 aa21.15■□□□□ 0.98
CHMP3-203ENST00000409225 WWC1Q8IX03 1113 aa21.15■□□□□ 0.98
CHMP3-203ENST00000409225 RAET1EQ8TD07 263 aa21.15■□□□□ 0.98
CHMP3-203ENST00000409225 TRIM47Q96LD4 638 aa21.15■□□□□ 0.98
CHMP3-203ENST00000409225 NKX2-3Q8TAU0 364 aa21.14■□□□□ 0.97
CHMP3-203ENST00000409225 PUS3Q9BZE2 481 aaKnown RBP21.14■□□□□ 0.97
CHMP3-203ENST00000409225 FMNL1O95466 1100 aaPredicted RBP21.13■□□□□ 0.97
CHMP3-203ENST00000409225 OSBPP22059 807 aa21.13■□□□□ 0.97
CHMP3-203ENST00000409225 GRK4P32298 578 aa21.13■□□□□ 0.97
CHMP3-203ENST00000409225 VPS37DQ86XT2 251 aa21.13■□□□□ 0.97
CHMP3-203ENST00000409225 TEKT1Q969V4 418 aa21.13■□□□□ 0.97
CHMP3-203ENST00000409225 HTATIP2Q9BUP3 242 aa21.13■□□□□ 0.97
CHMP3-203ENST00000409225 TMOD2Q9NZR1 351 aa21.13■□□□□ 0.97
CHMP3-203ENST00000409225 RIPOR2Q9Y4F9 1068 aa21.13■□□□□ 0.97
CHMP3-203ENST00000409225 GRM8O00222 908 aa21.12■□□□□ 0.97
CHMP3-203ENST00000409225 CCL5P13501 91 aa21.12■□□□□ 0.97
CHMP3-203ENST00000409225 HOXD10P28358 340 aa21.12■□□□□ 0.97
CHMP3-203ENST00000409225 CCDC27Q2M243 656 aa21.12■□□□□ 0.97
CHMP3-203ENST00000409225 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.12■□□□□ 0.97
CHMP3-203ENST00000409225 SLC17A8Q8NDX2 589 aa21.12■□□□□ 0.97
CHMP3-203ENST00000409225 HOOK2Q96ED9 719 aa21.12■□□□□ 0.97
CHMP3-203ENST00000409225 BIN2Q9UBW5 565 aaPredicted RBP21.12■□□□□ 0.97
CHMP3-203ENST00000409225 MYPNQ86TC9 1320 aa21.11■□□□□ 0.97
CHMP3-203ENST00000409225 DLL1O00548 723 aa21.11■□□□□ 0.97
CHMP3-203ENST00000409225 FRAT2O75474 233 aaPredicted RBP21.11■□□□□ 0.97
CHMP3-203ENST00000409225 GJA8P48165 433 aa21.11■□□□□ 0.97
CHMP3-203ENST00000409225 HDLBPQ00341 1268 aaKnown RBP21.11■□□□□ 0.97
CHMP3-203ENST00000409225 DCAF15Q66K64 600 aa21.11■□□□□ 0.97
CHMP3-203ENST00000409225 RNF208Q9H0X6 261 aa21.11■□□□□ 0.97
CHMP3-203ENST00000409225 IL16Q14005 1332 aa21.1■□□□□ 0.97
CHMP3-203ENST00000409225 FANCIQ9NVI1 1328 aa21.1■□□□□ 0.97
CHMP3-203ENST00000409225 PDHXO00330 501 aa21.1■□□□□ 0.97
CHMP3-203ENST00000409225 GJB1P08034 283 aa21.1■□□□□ 0.97
CHMP3-203ENST00000409225 PPATQ06203 517 aa21.1■□□□□ 0.97
CHMP3-203ENST00000409225 MIGA2Q7L4E1 593 aa21.1■□□□□ 0.97
CHMP3-203ENST00000409225 FBXO33Q7Z6M2 555 aa21.1■□□□□ 0.97
CHMP3-203ENST00000409225 UBE2Q1Q7Z7E8 422 aa21.1■□□□□ 0.97
CHMP3-203ENST00000409225 ANKRD23Q86SG2 305 aa21.1■□□□□ 0.97
CHMP3-203ENST00000409225 FAM83AQ86UY5 434 aa21.1■□□□□ 0.97
CHMP3-203ENST00000409225 TBC1D22AQ8WUA7 517 aa21.1■□□□□ 0.97
CHMP3-203ENST00000409225 C9orf78Q9NZ63 289 aaPredicted RBP21.1■□□□□ 0.97
CHMP3-203ENST00000409225 NR2E3Q9Y5X4 410 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms