RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 GMLQ99445 158 aa7.25□□□□□ -1.25
HMGB1P20-201ENST00000402555 API5Q9BZZ5 524 aaKnown RBP7.25□□□□□ -1.25
HMGB1P20-201ENST00000402555 COA1Q9GZY4 146 aa7.25□□□□□ -1.25
HMGB1P20-201ENST00000402555 PGAP2Q9UHJ9 254 aa7.25□□□□□ -1.25
HMGB1P20-201ENST00000402555 ABT1Q9ULW3 272 aaKnown RBP7.25□□□□□ -1.25
HMGB1P20-201ENST00000402555 JAG2Q9Y219 1238 aa7.25□□□□□ -1.25
HMGB1P20-201ENST00000402555 TRPM7Q96QT4 1865 aa7.25□□□□□ -1.25
HMGB1P20-201ENST00000402555 CNTNAP1P78357 1384 aa7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 ADM5C9JUS6 153 aa7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 CELF2O95319 508 aaKnown RBP7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 USP17L8P0C7I0 530 aa7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 VEGFBP49765 207 aa7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 BRPF1P55201 1214 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 ZNF280AP59817 542 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 GTF2IP78347 998 aa7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 DACT2Q5SW24 774 aa7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 CST9Q5W186 159 aa7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 ZNF454Q8N9F8 522 aa7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 AGBL3Q8NEM8 1001 aa7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 ZC3H15Q8WU90 426 aaKnown RBP7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 FRAT1Q92837 279 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 MEIS3Q99687 375 aa7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 ZNF408Q9H9D4 720 aa7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 CD209Q9NNX6 404 aa7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 GGA3Q9NZ52 723 aa7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 SCAF8Q9UPN6 1271 aaKnown RBP7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 KIF16BQ96L93 1317 aa7.24□□□□□ -1.25
HMGB1P20-201ENST00000402555 EVI5O60447 810 aa7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 UBTFL1P0CB47 393 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 GYG1P46976 350 aa7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 RFX5P48382 616 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 GRM1Q13255 1194 aa7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 SCARF1Q14162 830 aa7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 STRIP1Q5VSL9 837 aa7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 ANGEL2Q5VTE6 544 aaKnown RBP7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 TTLL5Q6EMB2 1281 aa7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 PAXIP1Q6ZW49 1069 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 CDC37L1Q7L3B6 337 aa7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 KRT26Q7Z3Y9 468 aa7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 ZNF804AQ7Z570 1209 aa7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 KIAA0825Q8IV33 1275 aa7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 CERS5Q8N5B7 392 aa7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 CLUAP1Q96AJ1 413 aa7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 KCNK17Q96T54 332 aa7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 MYOZ2Q9NPC6 264 aa7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 EMILIN3Q9NT22 766 aa7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 RIPOR2Q9Y4F9 1068 aa7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 LRRFIP2Q9Y608 721 aaKnown RBP7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 ZNF609O15014 1411 aa7.23□□□□□ -1.25
HMGB1P20-201ENST00000402555 RASSF10A6NK89 507 aa7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 F8W031 263 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 SASH1O94885 1247 aa7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 HSPA1AP0DMV8 641 aaKnown RBP7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 HSPA1BP0DMV9 641 aaKnown RBP7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 TRIM27P14373 513 aa7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 DEFB115Q30KQ5 88 aa7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 NBPF9Q3BBW0 867 aa7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 METTL24Q5JXM2 366 aa7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 CYP4F22Q6NT55 531 aa7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 C15orf52Q6ZUT6 534 aaKnown RBP7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 DCPSQ96C86 337 aaKnown RBP7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 FAM84BQ96KN1 310 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 SLC4A5Q9BY07 1137 aa7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 SIL1Q9H173 461 aa7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 IQSEC3Q9UPP2 1182 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 PA2G4Q9UQ80 394 aaKnown RBP7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 PCDHAC2Q9Y5I4 1007 aa7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 ZBED9Q6R2W3 1325 aa7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 MROH5Q6ZUA9 1318 aa7.22□□□□□ -1.25
HMGB1P20-201ENST00000402555 EYA2O00167 538 aa7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 AOC2O75106 756 aa7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 IL1R1P14778 569 aa7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 HIBADHP31937 336 aaKnown RBP7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 PTPN12Q05209 780 aaKnown RBP7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 UBE4AQ14139 1066 aa7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 PRAMEF18Q5VWM3 479 aa7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 INTS3Q68E01 1043 aaKnown RBP7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 ATF7IPQ6VMQ6 1270 aa7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 SULF1Q8IWU6 871 aa7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 OGFOD1Q8N543 542 aa7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 VGLL2Q8N8G2 317 aa7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 ARHGAP45Q92619 1136 aa7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 CAPNS2Q96L46 248 aa7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 VPS9D1Q9Y2B5 631 aa7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 TLL2Q9Y6L7 1015 aa7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 AOX1Q06278 1338 aa7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 MYO3BQ8WXR4 1341 aa7.21□□□□□ -1.26
HMGB1P20-201ENST00000402555 WNT10BO00744 389 aa7.2□□□□□ -1.26
HMGB1P20-201ENST00000402555 IPO8O15397 1037 aaKnown RBP7.2□□□□□ -1.26
HMGB1P20-201ENST00000402555 PDE8BO95263 885 aa7.2□□□□□ -1.26
HMGB1P20-201ENST00000402555 BCAMP50895 628 aa7.2□□□□□ -1.26
HMGB1P20-201ENST00000402555 MAP3K9P80192 1104 aa7.2□□□□□ -1.26
HMGB1P20-201ENST00000402555 CHAF1AQ13111 956 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P20-201ENST00000402555 ZKSCAN2Q63HK3 967 aa7.2□□□□□ -1.26
HMGB1P20-201ENST00000402555 ATG9AQ7Z3C6 839 aa7.2□□□□□ -1.26
HMGB1P20-201ENST00000402555 SAPCD2Q86UD0 394 aa7.2□□□□□ -1.26
HMGB1P20-201ENST00000402555 TMEM57Q8N5G2 664 aa7.2□□□□□ -1.26
HMGB1P20-201ENST00000402555 TDRD7Q8NHU6 1098 aaKnown RBP7.2□□□□□ -1.26
HMGB1P20-201ENST00000402555 BBXQ8WY36 941 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P20-201ENST00000402555 CDCA5Q96FF9 252 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms