RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 SH3TC1Q8TE82 1336 aa14.67□□□□□ -0.06
PPP4R1-202ENST00000400555 RGPD2P0DJD1 1756 aa14.67□□□□□ -0.06
PPP4R1-202ENST00000400555 ZBTB43O43298 467 aa14.67□□□□□ -0.06
PPP4R1-202ENST00000400555 IQCB1Q15051 598 aa14.67□□□□□ -0.06
PPP4R1-202ENST00000400555 ZNF827Q17R98 1081 aa14.67□□□□□ -0.06
PPP4R1-202ENST00000400555 OLFM4Q6UX06 510 aa14.67□□□□□ -0.06
PPP4R1-202ENST00000400555 CPLX3Q8WVH0 158 aa14.67□□□□□ -0.06
PPP4R1-202ENST00000400555 WWC3Q9ULE0 1092 aa14.67□□□□□ -0.06
PPP4R1-202ENST00000400555 PFKFB1P16118 471 aa14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 SAFBQ15424 915 aaKnown RBP eCLIP14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 ZNF274Q96GC6 653 aaPredicted RBP14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 KIAA1468Q9P260 1216 aa14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 MBD4O95243 580 aa14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 MCAMP43121 646 aa14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 CASP7P55210 303 aa14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 SNW1Q13573 536 aaKnown RBP14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 KRT40Q6A162 431 aa14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 VPS37DQ86XT2 251 aa14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 LINC00301Q8NCQ3 95 aa14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 KCNG4Q8TDN1 519 aa14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 PCDH11XQ9BZA7 1347 aa14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 PCDH11YQ9BZA8 1340 aa14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 PES1O00541 588 aaKnown RBP14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 AKAP17AQ02040 695 aaKnown RBP14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 NCAPD2Q15021 1401 aa14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 KIF18AQ8NI77 898 aa14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 JAG2Q9Y219 1238 aa14.66□□□□□ -0.06
PPP4R1-202ENST00000400555 PRKAB2O43741 272 aa14.65□□□□□ -0.06
PPP4R1-202ENST00000400555 TOPAZ1Q8N9V7 1692 aa14.65□□□□□ -0.06
PPP4R1-202ENST00000400555 SLIT1O75093 1534 aa14.65□□□□□ -0.06
PPP4R1-202ENST00000400555 ERICH2A1L162 156 aa14.65□□□□□ -0.06
PPP4R1-202ENST00000400555 UBASH3AP57075 661 aa14.65□□□□□ -0.06
PPP4R1-202ENST00000400555 ADALQ6DHV7 355 aa14.65□□□□□ -0.06
PPP4R1-202ENST00000400555 LRP10Q7Z4F1 713 aa14.65□□□□□ -0.06
PPP4R1-202ENST00000400555 ILDR1Q86SU0 546 aaPredicted RBP14.65□□□□□ -0.06
PPP4R1-202ENST00000400555 PIH1D3Q9NQM4 214 aaKnown RBP14.65□□□□□ -0.06
PPP4R1-202ENST00000400555 NALCNQ8IZF0 1738 aa14.65□□□□□ -0.06
PPP4R1-202ENST00000400555 ELF2Q15723 593 aa14.65□□□□□ -0.06
PPP4R1-202ENST00000400555 DNAI1Q9UI46 699 aa14.65□□□□□ -0.06
PPP4R1-202ENST00000400555 SMTNL1A8MU46 457 aa14.64□□□□□ -0.07
PPP4R1-202ENST00000400555 PRDM1O75626 825 aa14.64□□□□□ -0.07
PPP4R1-202ENST00000400555 URI1O94763 535 aaPredicted RBP14.64□□□□□ -0.07
PPP4R1-202ENST00000400555 CYB5R4Q7L1T6 521 aa14.64□□□□□ -0.07
PPP4R1-202ENST00000400555 TRMT44Q8IYL2 757 aaKnown RBP14.64□□□□□ -0.07
PPP4R1-202ENST00000400555 ZSWIM4Q9H7M6 989 aa14.64□□□□□ -0.07
PPP4R1-202ENST00000400555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.64□□□□□ -0.079e-7■■■□□ 15
PPP4R1-202ENST00000400555 RAI14Q9P0K7 980 aa14.64□□□□□ -0.07
PPP4R1-202ENST00000400555 ANGEL1Q9UNK9 670 aaKnown RBP14.64□□□□□ -0.07
PPP4R1-202ENST00000400555 TBC1D10CQ8IV04 446 aa14.64□□□□□ -0.07
PPP4R1-202ENST00000400555 DHX40Q8IX18 779 aaKnown RBP14.64□□□□□ -0.07
PPP4R1-202ENST00000400555 COBLO75128 1261 aa14.64□□□□□ -0.07
PPP4R1-202ENST00000400555 ZFYP08048 801 aaPredicted RBP14.64□□□□□ -0.07
PPP4R1-202ENST00000400555 LTN1O94822 1766 aa14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 AFMP43652 599 aa14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 STX17P56962 302 aa14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 GRAMD1CQ8IYS0 662 aa14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 ANTXR2P58335 489 aa14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 CCDC24Q8N4L8 307 aa14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 STAMQ92783 540 aa14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 UTP14AQ9BVJ6 771 aaKnown RBP14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 BTG4Q9NY30 223 aa14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 ZBTB1Q9Y2K1 713 aa14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 C1orf167Q5SNV9 1468 aa14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 BTBD18B2RXH4 712 aa14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 WDHD1O75717 1129 aaPredicted RBP14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 NCBP1Q09161 790 aaKnown RBP14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 CCDC102BQ68D86 513 aa14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 FMR1NBQ8N0W7 255 aaPredicted RBP14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 MNS1Q8NEH6 495 aa14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 NKX2-3Q8TAU0 364 aa14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 PIGBQ92521 554 aa14.63□□□□□ -0.07
PPP4R1-202ENST00000400555 CDC27P30260 824 aa14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 SSRP1Q08945 709 aaKnown RBP14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 JMYQ8N9B5 988 aa14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 SEC31BQ9NQW1 1179 aa14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 RTEL1Q9NZ71 1219 aa14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 SLC4A4Q9Y6R1 1079 aa14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 ERICH4A6NGS2 130 aa14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 FOXN1O15353 648 aa14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 RANBP6O60518 1105 aaKnown RBP14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 FANCCQ00597 558 aa14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 DZIP3Q86Y13 1208 aaKnown RBP14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 ALDH8A1Q9H2A2 487 aaPredicted RBP14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 CACNA1FO60840 1977 aa14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 NFAT5O94916 1531 aa14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 ADAMTS2O95450 1211 aa14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 PDE6AP16499 860 aa14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 RASSF8Q8NHQ8 419 aa14.62□□□□□ -0.07
PPP4R1-202ENST00000400555 CAVIN2O95810 425 aa14.61□□□□□ -0.07
PPP4R1-202ENST00000400555 TOP1P11387 765 aaKnown RBP14.61□□□□□ -0.07
PPP4R1-202ENST00000400555 KCNQ4P56696 695 aa14.61□□□□□ -0.07
PPP4R1-202ENST00000400555 KIF23Q02241 960 aaPredicted RBP14.61□□□□□ -0.07
PPP4R1-202ENST00000400555 MFSD6Q6ZSS7 791 aa14.61□□□□□ -0.07
PPP4R1-202ENST00000400555 TRIM22Q8IYM9 498 aa14.61□□□□□ -0.07
PPP4R1-202ENST00000400555 PAXBP1Q9Y5B6 917 aa14.61□□□□□ -0.07
PPP4R1-202ENST00000400555 CDKL5O76039 1030 aa14.61□□□□□ -0.07
PPP4R1-202ENST00000400555 BCAMP50895 628 aa14.61□□□□□ -0.07
PPP4R1-202ENST00000400555 MAP3K12Q12852 859 aa14.61□□□□□ -0.07
PPP4R1-202ENST00000400555 UBAC1Q9BSL1 405 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms