RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 ARMC9Q7Z3E5 817 aa16.5■□□□□ 0.23
GABPA-202ENST00000400075 AXIN2Q9Y2T1 843 aa16.5■□□□□ 0.23
GABPA-202ENST00000400075 SMTNL1A8MU46 457 aa16.5■□□□□ 0.23
GABPA-202ENST00000400075 FKBP15Q5T1M5 1219 aa16.5■□□□□ 0.23
GABPA-202ENST00000400075 GOPCQ9HD26 462 aa16.5■□□□□ 0.23
GABPA-202ENST00000400075 GREM2Q9H772 168 aa16.5■□□□□ 0.23
GABPA-202ENST00000400075 RAD50Q92878 1312 aa16.5■□□□□ 0.23
GABPA-202ENST00000400075 GJB2P29033 226 aa16.49■□□□□ 0.23
GABPA-202ENST00000400075 GSE1Q14687 1217 aa16.49■□□□□ 0.23
GABPA-202ENST00000400075 HEG1Q9ULI3 1381 aa16.49■□□□□ 0.23
GABPA-202ENST00000400075 NARFQ9UHQ1 456 aa16.49■□□□□ 0.23
GABPA-202ENST00000400075 ZBTB21Q9ULJ3 1066 aa16.49■□□□□ 0.23
GABPA-202ENST00000400075 ZBTB7BO15156 539 aaPredicted RBP16.49■□□□□ 0.23
GABPA-202ENST00000400075 USP37Q86T82 979 aa16.49■□□□□ 0.23
GABPA-202ENST00000400075 KBTBD3Q8NAB2 608 aa16.49■□□□□ 0.23
GABPA-202ENST00000400075 TFIP11Q9UBB9 837 aaKnown RBP16.49■□□□□ 0.23
GABPA-202ENST00000400075 MYO6Q9UM54 1294 aa16.49■□□□□ 0.23
GABPA-202ENST00000400075 CLRN2A0PK11 232 aa16.48■□□□□ 0.23
GABPA-202ENST00000400075 KCNQ2O43526 872 aa16.48■□□□□ 0.23
GABPA-202ENST00000400075 CETN2P41208 172 aa16.48■□□□□ 0.23
GABPA-202ENST00000400075 BCAMP50895 628 aa16.48■□□□□ 0.23
GABPA-202ENST00000400075 MNS1Q8NEH6 495 aa16.48■□□□□ 0.23
GABPA-202ENST00000400075 IL27Q8NEV9 243 aa16.48■□□□□ 0.23
GABPA-202ENST00000400075 CHURC1Q8WUH1 139 aa16.48■□□□□ 0.23
GABPA-202ENST00000400075 RNF181Q9P0P0 153 aa16.48■□□□□ 0.23
GABPA-202ENST00000400075 BLMP54132 1417 aaPredicted RBP16.48■□□□□ 0.23
GABPA-202ENST00000400075 SSFA2P28290 1259 aa16.48■□□□□ 0.23
GABPA-202ENST00000400075 TNNT3P45378 269 aaPredicted RBP16.48■□□□□ 0.23
GABPA-202ENST00000400075 DHX32Q7L7V1 743 aaKnown RBP16.48■□□□□ 0.23
GABPA-202ENST00000400075 SKAP1Q86WV1 359 aa16.48■□□□□ 0.23
GABPA-202ENST00000400075 NECAB1Q8N987 351 aa16.48■□□□□ 0.23
GABPA-202ENST00000400075 HOMER2Q9NSB8 354 aa16.48■□□□□ 0.23
GABPA-202ENST00000400075 ZNF532Q9HCE3 1301 aa16.47■□□□□ 0.23
GABPA-202ENST00000400075 GPS2Q13227 327 aa16.47■□□□□ 0.23
GABPA-202ENST00000400075 KRT79Q5XKE5 535 aa16.47■□□□□ 0.23
GABPA-202ENST00000400075 CACNA2D4Q7Z3S7 1137 aa16.47■□□□□ 0.23
GABPA-202ENST00000400075 KIF1BO60333 1816 aa16.47■□□□□ 0.23
GABPA-202ENST00000400075 B4E1Z4 1266 aa16.47■□□□□ 0.23
GABPA-202ENST00000400075 CCDC40Q4G0X9 1142 aa16.47■□□□□ 0.23
GABPA-202ENST00000400075 PKD2L1Q9P0L9 805 aa16.47■□□□□ 0.23
GABPA-202ENST00000400075 C1orf167Q5SNV9 1468 aa16.47■□□□□ 0.23
GABPA-202ENST00000400075 STX6O43752 255 aa16.47■□□□□ 0.23
GABPA-202ENST00000400075 MAP3K11Q16584 847 aa16.47■□□□□ 0.23
GABPA-202ENST00000400075 VPS36Q86VN1 386 aa16.47■□□□□ 0.23
GABPA-202ENST00000400075 ZNF397Q8NF99 534 aaPredicted RBP16.47■□□□□ 0.23
GABPA-202ENST00000400075 RBM28Q9NW13 759 aaKnown RBP16.47■□□□□ 0.23
GABPA-202ENST00000400075 FSIP1Q8NA03 581 aa16.47■□□□□ 0.23
GABPA-202ENST00000400075 GLT8D2Q9H1C3 349 aa16.47■□□□□ 0.23
GABPA-202ENST00000400075 GINS2Q9Y248 185 aa16.47■□□□□ 0.23
GABPA-202ENST00000400075 SYNMO15061 1565 aa16.47■□□□□ 0.23
GABPA-202ENST00000400075 MYCLP12524 364 aaPredicted RBP16.46■□□□□ 0.23
GABPA-202ENST00000400075 CNGA1P29973 690 aa16.46■□□□□ 0.23
GABPA-202ENST00000400075 PPM1FP49593 454 aaPredicted RBP16.46■□□□□ 0.23
GABPA-202ENST00000400075 KDRP35968 1356 aa16.46■□□□□ 0.23
GABPA-202ENST00000400075 PDE8BO95263 885 aa16.46■□□□□ 0.23
GABPA-202ENST00000400075 NLRP10Q86W26 655 aa16.46■□□□□ 0.23
GABPA-202ENST00000400075 TRIM75PA6NK02 468 aa16.46■□□□□ 0.23
GABPA-202ENST00000400075 CCDC102BQ68D86 513 aa16.46■□□□□ 0.23
GABPA-202ENST00000400075 GRIN3BO60391 1043 aa16.45■□□□□ 0.22
GABPA-202ENST00000400075 PHACTR2O75167 634 aa16.45■□□□□ 0.22
GABPA-202ENST00000400075 NASPP49321 788 aaPredicted RBP16.45■□□□□ 0.22
GABPA-202ENST00000400075 NFKBIBQ15653 356 aa16.45■□□□□ 0.22
GABPA-202ENST00000400075 USP8P40818 1118 aa16.45■□□□□ 0.22
GABPA-202ENST00000400075 PROSER3Q2NL68 480 aa16.45■□□□□ 0.22
GABPA-202ENST00000400075 ATG3Q9NT62 314 aa16.45■□□□□ 0.22
GABPA-202ENST00000400075 CLIP2Q9UDT6 1046 aa16.45■□□□□ 0.22
GABPA-202ENST00000400075 IBTKQ9P2D0 1353 aaPredicted RBP16.45■□□□□ 0.22
GABPA-202ENST00000400075 PNMA6EA0A0J9YXQ4 647 aa16.45■□□□□ 0.22
GABPA-202ENST00000400075 ANAPC15P60006 121 aa16.45■□□□□ 0.22
GABPA-202ENST00000400075 CFAP100Q494V2 611 aa16.45■□□□□ 0.22
GABPA-202ENST00000400075 TFAP4Q01664 338 aa16.45■□□□□ 0.22
GABPA-202ENST00000400075 CREB3L3Q68CJ9 461 aa16.45■□□□□ 0.22
GABPA-202ENST00000400075 CRB1P82279 1406 aa16.45■□□□□ 0.22
GABPA-202ENST00000400075 ABCA9Q8IUA7 1624 aa16.45■□□□□ 0.22
GABPA-202ENST00000400075 GRAPQ13588 217 aa16.44■□□□□ 0.22
GABPA-202ENST00000400075 GRAPLQ8TC17 118 aaPredicted RBP16.44■□□□□ 0.22
GABPA-202ENST00000400075 USP44Q9H0E7 712 aa16.44■□□□□ 0.22
GABPA-202ENST00000400075 USP17L12C9JPN9 530 aa16.44■□□□□ 0.22
GABPA-202ENST00000400075 USP17L21D6R901 530 aa16.44■□□□□ 0.22
GABPA-202ENST00000400075 BTDP43251 543 aa16.44■□□□□ 0.22
GABPA-202ENST00000400075 NAP1L4Q99733 375 aaKnown RBP16.44■□□□□ 0.22
GABPA-202ENST00000400075 SEC31BQ9NQW1 1179 aa16.44■□□□□ 0.22
GABPA-202ENST00000400075 RXRAP19793 462 aa16.44■□□□□ 0.22
GABPA-202ENST00000400075 CERKLQ49MI3 558 aaPredicted RBP16.44■□□□□ 0.22
GABPA-202ENST00000400075 KANK3Q6NY19 840 aa16.44■□□□□ 0.22
GABPA-202ENST00000400075 ARHGEF1Q92888 912 aaKnown RBP16.44■□□□□ 0.22
GABPA-202ENST00000400075 TMEM87BQ96K49 555 aa16.44■□□□□ 0.22
GABPA-202ENST00000400075 RUFY1Q96T51 708 aa16.44■□□□□ 0.22
GABPA-202ENST00000400075 CCNA1P78396 465 aa16.44■□□□□ 0.22
GABPA-202ENST00000400075 TAF12Q16514 161 aa16.44■□□□□ 0.22
GABPA-202ENST00000400075 KIFC2Q96AC6 838 aa16.44■□□□□ 0.22
GABPA-202ENST00000400075 ZSCAN16Q9H4T2 348 aaPredicted RBP16.44■□□□□ 0.22
GABPA-202ENST00000400075 MTIF2P46199 727 aaKnown RBP16.43■□□□□ 0.22
GABPA-202ENST00000400075 TTC16Q8NEE8 873 aa16.43■□□□□ 0.22
GABPA-202ENST00000400075 ARPP21Q9UBL0 812 aaPredicted RBP16.43■□□□□ 0.22
GABPA-202ENST00000400075 CAMK4Q16566 473 aa16.43■□□□□ 0.22
GABPA-202ENST00000400075 CCDC129Q6ZRS4 1044 aa16.43■□□□□ 0.22
GABPA-202ENST00000400075 PUF60Q9UHX1 559 aaKnown RBP16.43■□□□□ 0.22
GABPA-202ENST00000400075 APBB1IPQ7Z5R6 666 aaPredicted RBP16.43■□□□□ 0.22
GABPA-202ENST00000400075 C2orf69Q8N8R5 385 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms