RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 FBXO33Q7Z6M2 555 aa31.36■■■□□ 2.61
U2AF1-203ENST00000398137 CCDC102AQ96A19 550 aa31.36■■■□□ 2.61
U2AF1-203ENST00000398137 CAPN15O75808 1086 aa31.35■■■□□ 2.61
U2AF1-203ENST00000398137 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.35■■■□□ 2.61
U2AF1-203ENST00000398137 NEFLP07196 543 aa31.34■■■□□ 2.61
U2AF1-203ENST00000398137 KIF23Q02241 960 aaPredicted RBP31.34■■■□□ 2.61
U2AF1-203ENST00000398137 DLGAP5Q15398 846 aa31.34■■■□□ 2.61
U2AF1-203ENST00000398137 CFAP100Q494V2 611 aa31.34■■■□□ 2.61
U2AF1-203ENST00000398137 RASAL3Q86YV0 1011 aa31.34■■■□□ 2.61
U2AF1-203ENST00000398137 PRMT6Q96LA8 375 aaPredicted RBP31.34■■■□□ 2.61
U2AF1-203ENST00000398137 UBE2Q2LH0YL09 131 aa31.33■■■□□ 2.61
U2AF1-203ENST00000398137 APBB1O00213 710 aa31.33■■■□□ 2.61
U2AF1-203ENST00000398137 FGFR2P21802 821 aa31.33■■■□□ 2.61
U2AF1-203ENST00000398137 ATP2B3Q16720 1220 aa31.33■■■□□ 2.61
U2AF1-203ENST00000398137 HSP90AB4PQ58FF6 505 aa31.33■■■□□ 2.61
U2AF1-203ENST00000398137 APOBEC3FQ8IUX4 373 aaKnown RBP31.33■■■□□ 2.61
U2AF1-203ENST00000398137 SPDYE2BA6NHP3 402 aa31.32■■■□□ 2.6
U2AF1-203ENST00000398137 SPDYE6P0CI01 402 aa31.32■■■□□ 2.6
U2AF1-203ENST00000398137 GRIK5Q16478 980 aa31.32■■■□□ 2.6
U2AF1-203ENST00000398137 MFSD14BQ5SR56 506 aa31.32■■■□□ 2.6
U2AF1-203ENST00000398137 SLC5A1P13866 664 aa31.31■■■□□ 2.6
U2AF1-203ENST00000398137 ERC1Q8IUD2 1116 aa31.31■■■□□ 2.6
U2AF1-203ENST00000398137 IQSEC3Q9UPP2 1182 aaPredicted RBP31.31■■■□□ 2.6
U2AF1-203ENST00000398137 SSC5DA1L4H1 1573 aa31.3■■■□□ 2.6
U2AF1-203ENST00000398137 CASP8AP2Q9UKL3 1982 aa31.3■■■□□ 2.6
U2AF1-203ENST00000398137 CA12O43570 354 aa31.3■■■□□ 2.6
U2AF1-203ENST00000398137 IFIT1P09914 478 aaKnown RBP31.3■■■□□ 2.6
U2AF1-203ENST00000398137 LPIN2Q92539 896 aa31.3■■■□□ 2.6
U2AF1-203ENST00000398137 HDAC1Q13547 482 aaPredicted RBP31.29■■■□□ 2.6
U2AF1-203ENST00000398137 CSRNP1Q96S65 589 aa31.29■■■□□ 2.6
U2AF1-203ENST00000398137 AKAP2Q9Y2D5 859 aa31.29■■■□□ 2.6
U2AF1-203ENST00000398137 COL1A1P02452 1464 aaPredicted RBP31.28■■■□□ 2.6
U2AF1-203ENST00000398137 CLRN2A0PK11 232 aa31.28■■■□□ 2.6
U2AF1-203ENST00000398137 BCAMP50895 628 aa31.28■■■□□ 2.6
U2AF1-203ENST00000398137 DEFB129Q9H1M3 183 aa31.28■■■□□ 2.6
U2AF1-203ENST00000398137 FZD1Q9UP38 647 aa31.28■■■□□ 2.6
U2AF1-203ENST00000398137 AKAP11Q9UKA4 1901 aa31.28■■■□□ 2.6
U2AF1-203ENST00000398137 A0A1B0GUL7 405 aa31.27■■■□□ 2.6
U2AF1-203ENST00000398137 RAB11FIP3O75154 756 aa31.27■■■□□ 2.6
U2AF1-203ENST00000398137 RHPN1Q8TCX5 695 aa31.27■■■□□ 2.6
U2AF1-203ENST00000398137 DCTPP1Q9H773 170 aa31.27■■■□□ 2.6
U2AF1-203ENST00000398137 TNNI3KQ59H18 835 aa31.26■■■□□ 2.59
U2AF1-203ENST00000398137 KIF1BPQ96EK5 621 aa31.26■■■□□ 2.59
U2AF1-203ENST00000398137 IL1RAPL2Q9NP60 686 aa31.26■■■□□ 2.59
U2AF1-203ENST00000398137 TTF2Q9UNY4 1162 aaKnown RBP31.26■■■□□ 2.59
U2AF1-203ENST00000398137 FPGT-TNNI3KV9GXZ4 949 aa31.26■■■□□ 2.59
U2AF1-203ENST00000398137 ADORA1P30542 326 aa31.25■■■□□ 2.59
U2AF1-203ENST00000398137 TIMM10P62072 90 aa31.25■■■□□ 2.59
U2AF1-203ENST00000398137 PRKG1Q13976 671 aa31.24■■■□□ 2.59
U2AF1-203ENST00000398137 NEUROD6Q96NK8 337 aa31.24■■■□□ 2.59
U2AF1-203ENST00000398137 BCL11AQ9H165 835 aa31.24■■■□□ 2.59
U2AF1-203ENST00000398137 RWDD1Q9H446 243 aaPredicted RBP31.24■■■□□ 2.59
U2AF1-203ENST00000398137 GPR108Q9NPR9 543 aa31.24■■■□□ 2.59
U2AF1-203ENST00000398137 RNF186Q9NXI6 227 aa31.24■■■□□ 2.59
U2AF1-203ENST00000398137 TTLL12Q14166 644 aaPredicted RBP31.23■■■□□ 2.59
U2AF1-203ENST00000398137 CAVIN4Q5BKX8 364 aa31.23■■■□□ 2.59
U2AF1-203ENST00000398137 LDLRAD1Q5T700 205 aa31.23■■■□□ 2.59
U2AF1-203ENST00000398137 SERPINA10Q9UK55 444 aa31.23■■■□□ 2.59
U2AF1-203ENST00000398137 NF2P35240 595 aa31.22■■■□□ 2.59
U2AF1-203ENST00000398137 CHAF1AQ13111 956 aaPredicted RBP31.22■■■□□ 2.59
U2AF1-203ENST00000398137 VPS37DQ86XT2 251 aa31.22■■■□□ 2.59
U2AF1-203ENST00000398137 MYH13Q9UKX3 1938 aa31.22■■■□□ 2.59
U2AF1-203ENST00000398137 IGHDP01880 384 aa31.21■■■□□ 2.59
U2AF1-203ENST00000398137 RBM5P52756 815 aaKnown RBP eCLIP31.21■■■□□ 2.59
U2AF1-203ENST00000398137 SPDYE2Q495Y8 402 aa31.21■■■□□ 2.59
U2AF1-203ENST00000398137 XAGE2Q96GT9 111 aa31.21■■■□□ 2.59
U2AF1-203ENST00000398137 LRRCC1Q9C099 1032 aa31.21■■■□□ 2.59
U2AF1-203ENST00000398137 SAGE1Q9NXZ1 904 aa31.21■■■□□ 2.59
U2AF1-203ENST00000398137 MYO1BO43795 1136 aa31.2■■■□□ 2.59
U2AF1-203ENST00000398137 CRKP46108 304 aa31.2■■■□□ 2.59
U2AF1-203ENST00000398137 AACSQ86V21 672 aa31.2■■■□□ 2.59
U2AF1-203ENST00000398137 EAF2Q96CJ1 260 aaPredicted RBP31.2■■■□□ 2.59
U2AF1-203ENST00000398137 TDRD3Q9H7E2 651 aaKnown RBP31.2■■■□□ 2.59
U2AF1-203ENST00000398137 VEZTQ9HBM0 779 aa31.2■■■□□ 2.59
U2AF1-203ENST00000398137 ZNF70Q9UC06 446 aaPredicted RBP31.2■■■□□ 2.59
U2AF1-203ENST00000398137 PPP2R3BQ9Y5P8 575 aa31.2■■■□□ 2.59
U2AF1-203ENST00000398137 SMARCA5O60264 1052 aaPredicted RBP31.19■■■□□ 2.58
U2AF1-203ENST00000398137 TRPA1O75762 1119 aa31.19■■■□□ 2.58
U2AF1-203ENST00000398137 MAP3K11Q16584 847 aa31.19■■■□□ 2.58
U2AF1-203ENST00000398137 NBPF12Q5TAG4 269 aaPredicted RBP31.19■■■□□ 2.58
U2AF1-203ENST00000398137 TLR7Q9NYK1 1049 aaKnown RBP31.19■■■□□ 2.58
U2AF1-203ENST00000398137 ANGEL1Q9UNK9 670 aaKnown RBP31.19■■■□□ 2.58
U2AF1-203ENST00000398137 PHKA1P46020 1223 aa31.18■■■□□ 2.58
U2AF1-203ENST00000398137 RASA3Q14644 834 aa31.18■■■□□ 2.58
U2AF1-203ENST00000398137 ARMC9Q7Z3E5 817 aa31.18■■■□□ 2.58
U2AF1-203ENST00000398137 ABHD8Q96I13 439 aa31.18■■■□□ 2.58
U2AF1-203ENST00000398137 DBNDD2Q9BQY9 259 aa31.18■■■□□ 2.58
U2AF1-203ENST00000398137 CCDC8Q9H0W5 538 aaPredicted RBP31.18■■■□□ 2.58
U2AF1-203ENST00000398137 GORABQ5T7V8 394 aa31.17■■■□□ 2.58
U2AF1-203ENST00000398137 CDAN1Q8IWY9 1227 aa31.17■■■□□ 2.58
U2AF1-203ENST00000398137 CLASRPQ8N2M8 674 aaKnown RBP31.17■■■□□ 2.58
U2AF1-203ENST00000398137 GCC1Q96CN9 775 aa31.17■■■□□ 2.58
U2AF1-203ENST00000398137 CCDC102BQ68D86 513 aa31.16■■■□□ 2.58
U2AF1-203ENST00000398137 TBC1D22AQ8WUA7 517 aa31.16■■■□□ 2.58
U2AF1-203ENST00000398137 DBNLQ9UJU6 430 aaKnown RBP31.16■■■□□ 2.58
U2AF1-203ENST00000398137 FRAT2O75474 233 aaPredicted RBP31.15■■■□□ 2.58
U2AF1-203ENST00000398137 MKRN3Q13064 507 aaKnown RBP31.15■■■□□ 2.58
U2AF1-203ENST00000398137 TEPSINQ96N21 525 aa31.15■■■□□ 2.58
U2AF1-203ENST00000398137 LAMB1P07942 1786 aa31.15■■■□□ 2.58
U2AF1-203ENST00000398137 OTOFQ9HC10 1997 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms