RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 SPATA5Q8NB90 893 aa12.13□□□□□ -0.47
CPSF1P1-201ENST00000397477 GPR108Q9NPR9 543 aa12.13□□□□□ -0.47
CPSF1P1-201ENST00000397477 ZNF500O60304 480 aaPredicted RBP12.13□□□□□ -0.47
CPSF1P1-201ENST00000397477 PUM3Q15397 648 aaKnown RBP12.13□□□□□ -0.47
CPSF1P1-201ENST00000397477 STX1AQ16623 288 aa12.13□□□□□ -0.47
CPSF1P1-201ENST00000397477 LLPHQ9BRT6 129 aaKnown RBP12.13□□□□□ -0.47
CPSF1P1-201ENST00000397477 KCNJ14Q9UNX9 436 aa12.13□□□□□ -0.47
CPSF1P1-201ENST00000397477 CARMIL3Q8ND23 1372 aa12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 SLC3A2P08195 630 aaKnown RBP12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 CYP19A1P11511 503 aaPredicted RBP12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 TBC1D10CQ8IV04 446 aa12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 ANO10Q9NW15 660 aa12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 ANGEL1Q9UNK9 670 aaKnown RBP12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 CHD2O14647 1828 aaKnown RBP12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 LMOD1P29536 600 aaPredicted RBP12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 NDUFA8P51970 172 aa12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 TPM4P67936 248 aa12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 ARID5BQ14865 1188 aa12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 TSGA10IPQ3SY00 556 aa12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 NAT10Q9H0A0 1025 aaKnown RBP12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 MED1Q15648 1581 aaPredicted RBP12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 OVOS2A0A0G2JMS6 1433 aa12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 KCNQ2O43526 872 aa12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 CRKLP46109 303 aaKnown RBP12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 EXOSC10Q01780 885 aaKnown RBP12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 CCDC152Q4G0S7 254 aa12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 SLC4A9Q96Q91 983 aa12.12□□□□□ -0.47
CPSF1P1-201ENST00000397477 UQCRFS1P1P0C7P4 283 aa12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 FAM98CQ17RN3 349 aaKnown RBP12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 NAA16Q6N069 864 aaPredicted RBP12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 CYB5R4Q7L1T6 521 aa12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 TRIM22Q8IYM9 498 aa12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 FAM177A1Q8N128 213 aaPredicted RBP12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 LPIN2Q92539 896 aa12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 ZNF274Q96GC6 653 aaPredicted RBP12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 CLIC6Q96NY7 704 aa12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 RIPOR2Q9Y4F9 1068 aa12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 CDK11BP21127 795 aaKnown RBP12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 ADD2P35612 726 aa12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 FAM160A1Q05DH4 1040 aa12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 SSRP1Q08945 709 aaKnown RBP12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 RASGRF1Q13972 1273 aa12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 TFCP2L1Q9NZI6 479 aa12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 CDKL5O76039 1030 aa12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 RASSF8Q8NHQ8 419 aa12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 NGLY1Q96IV0 654 aa12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 C8orf37Q96NL8 207 aa12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 CCDC87Q9NVE4 849 aa12.11□□□□□ -0.47
CPSF1P1-201ENST00000397477 WTIPA6NIX2 430 aaPredicted RBP12.1□□□□□ -0.47
CPSF1P1-201ENST00000397477 SERPINC1P01008 464 aa12.1□□□□□ -0.47
CPSF1P1-201ENST00000397477 ZNF75DP51815 510 aa12.1□□□□□ -0.47
CPSF1P1-201ENST00000397477 MYSM1Q5VVJ2 828 aa12.1□□□□□ -0.47
CPSF1P1-201ENST00000397477 KRT40Q6A162 431 aa12.1□□□□□ -0.47
CPSF1P1-201ENST00000397477 LRRC37A3O60309 1634 aa12.1□□□□□ -0.47
CPSF1P1-201ENST00000397477 CYP2D7A0A087X1C5 515 aa12.1□□□□□ -0.47
CPSF1P1-201ENST00000397477 FDPSP14324 419 aaKnown RBP12.1□□□□□ -0.47
CPSF1P1-201ENST00000397477 WTAPQ15007 396 aa12.1□□□□□ -0.47
CPSF1P1-201ENST00000397477 IFNL3Q8IZI9 196 aa12.1□□□□□ -0.47
CPSF1P1-201ENST00000397477 ELP1O95163 1332 aa12.1□□□□□ -0.47
CPSF1P1-201ENST00000397477 SLIT3O75094 1523 aa12.1□□□□□ -0.47
CPSF1P1-201ENST00000397477 LOC102724428A0A0B4J2F2 783 aa12.1□□□□□ -0.47
CPSF1P1-201ENST00000397477 SIK1P57059 783 aa12.1□□□□□ -0.47
CPSF1P1-201ENST00000397477 TMC6Q7Z403 805 aa12.1□□□□□ -0.47
CPSF1P1-201ENST00000397477 FBXO18Q8NFZ0 1043 aa12.1□□□□□ -0.47
CPSF1P1-201ENST00000397477 IL17RAQ96F46 866 aa12.1□□□□□ -0.47
CPSF1P1-201ENST00000397477 TNNT1P13805 278 aa12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 SYKP43405 635 aa12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 HOMER1Q86YM7 354 aa12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 V9GYY5 206 aaPredicted RBP12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 CAMTA1Q9Y6Y1 1673 aa12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 SOS2Q07890 1332 aaPredicted RBP12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 ANTXR2P58335 489 aa12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 ANO1Q5XXA6 986 aa12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 KLHL10Q6JEL2 608 aa12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 LCORLQ8N3X6 602 aa12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 SMARCC2Q8TAQ2 1214 aa12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 TMX1Q9H3N1 280 aa12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 GNL3LQ9NVN8 582 aaKnown RBP12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 RGPD5Q99666 1765 aa12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 KIF28PB7ZC32 967 aa12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 RRP9O43818 475 aaKnown RBP12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 NRDCO43847 1150 aa12.09□□□□□ -0.47
CPSF1P1-201ENST00000397477 CACNA1FO60840 1977 aa12.08□□□□□ -0.47
CPSF1P1-201ENST00000397477 ZNF202O95125 648 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 CAVIN4Q5BKX8 364 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 ANKRD18AQ8IVF6 992 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 CNNM3Q8NE01 707 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 KCNG4Q8TDN1 519 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 PRDM10Q9NQV6 1147 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 ZSWIM5Q9P217 1185 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 RCOR1Q9UKL0 485 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 NEDD4P46934 1319 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 UBN2Q6ZU65 1347 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 CTAGE5O15320 804 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 CDC27P30260 824 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 CHRNDQ07001 517 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 NKX1-1Q15270 411 aaPredicted RBP12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 RTN1Q16799 776 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 CFAP100Q494V2 611 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms