RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 PRKG1Q13976 671 aa17.08■□□□□ 0.32
CXCL12-205ENST00000395794 ATP2B3Q16720 1220 aa17.08■□□□□ 0.32
CXCL12-205ENST00000395794 SUPT20HL1Q3ZLR7 823 aa17.08■□□□□ 0.32
CXCL12-205ENST00000395794 COPRSQ9NQ92 184 aa17.08■□□□□ 0.32
CXCL12-205ENST00000395794 PAPPA2Q9BXP8 1791 aa17.07■□□□□ 0.32
CXCL12-205ENST00000395794 MAST3O60307 1309 aa17.07■□□□□ 0.32
CXCL12-205ENST00000395794 PPP1R12BO60237 982 aaPredicted RBP17.07■□□□□ 0.32
CXCL12-205ENST00000395794 CRKP46108 304 aa17.07■□□□□ 0.32
CXCL12-205ENST00000395794 MOB2Q70IA6 237 aa17.07■□□□□ 0.32
CXCL12-205ENST00000395794 RASAL3Q86YV0 1011 aa17.07■□□□□ 0.32
CXCL12-205ENST00000395794 FTSJ3Q8IY81 847 aaKnown RBP17.07■□□□□ 0.32
CXCL12-205ENST00000395794 ZIC5Q96T25 663 aa17.07■□□□□ 0.32
CXCL12-205ENST00000395794 TSKSQ9UJT2 592 aa17.07■□□□□ 0.32
CXCL12-205ENST00000395794 PCDHAC2Q9Y5I4 1007 aa17.07■□□□□ 0.32
CXCL12-205ENST00000395794 HDLBPQ00341 1268 aaKnown RBP17.06■□□□□ 0.32
CXCL12-205ENST00000395794 DZIP1LQ8IYY4 767 aaKnown RBP17.06■□□□□ 0.32
CXCL12-205ENST00000395794 WDR66Q8TBY9 1149 aa17.06■□□□□ 0.32
CXCL12-205ENST00000395794 TEKT1Q969V4 418 aa17.06■□□□□ 0.32
CXCL12-205ENST00000395794 ANGEL1Q9UNK9 670 aaKnown RBP17.06■□□□□ 0.32
CXCL12-205ENST00000395794 PA2G4Q9UQ80 394 aaKnown RBP17.06■□□□□ 0.32
CXCL12-205ENST00000395794 SUGT1Q9Y2Z0 365 aa17.06■□□□□ 0.32
CXCL12-205ENST00000395794 TNNI2P48788 182 aa17.05■□□□□ 0.32
CXCL12-205ENST00000395794 TDRD3Q9H7E2 651 aaKnown RBP17.05■□□□□ 0.32
CXCL12-205ENST00000395794 ZNF70Q9UC06 446 aaPredicted RBP17.05■□□□□ 0.32
CXCL12-205ENST00000395794 AKAP2Q9Y2D5 859 aa17.05■□□□□ 0.32
CXCL12-205ENST00000395794 MTX1Q13505 466 aa17.04■□□□□ 0.32
CXCL12-205ENST00000395794 RASA3Q14644 834 aa17.04■□□□□ 0.32
CXCL12-205ENST00000395794 SPDYE2Q495Y8 402 aa17.04■□□□□ 0.32
CXCL12-205ENST00000395794 TMEM57Q8N5G2 664 aa17.04■□□□□ 0.32
CXCL12-205ENST00000395794 SAGE1Q9NXZ1 904 aa17.04■□□□□ 0.32
CXCL12-205ENST00000395794 TMOD2Q9NZR1 351 aa17.04■□□□□ 0.32
CXCL12-205ENST00000395794 CSRNP1Q96S65 589 aa17.03■□□□□ 0.32
CXCL12-205ENST00000395794 MRIQ9BWK5 157 aa17.03■□□□□ 0.32
CXCL12-205ENST00000395794 DENND2AQ9ULE3 1009 aa17.03■□□□□ 0.32
CXCL12-205ENST00000395794 TNNQ9UQP3 1299 aa17.03■□□□□ 0.32
CXCL12-205ENST00000395794 SEMA3EO15041 775 aa17.02■□□□□ 0.32
CXCL12-205ENST00000395794 TRPA1O75762 1119 aa17.02■□□□□ 0.32
CXCL12-205ENST00000395794 IREB2P48200 963 aaKnown RBP17.02■□□□□ 0.32
CXCL12-205ENST00000395794 G3BP1Q13283 466 aaKnown RBP eCLIP17.02■□□□□ 0.32
CXCL12-205ENST00000395794 GRIK5Q16478 980 aa17.02■□□□□ 0.32
CXCL12-205ENST00000395794 SLC10A4Q96EP9 437 aa17.02■□□□□ 0.32
CXCL12-205ENST00000395794 ZDHHC15Q96MV8 337 aa17.02■□□□□ 0.32
CXCL12-205ENST00000395794 RNF186Q9NXI6 227 aa17.02■□□□□ 0.32
CXCL12-205ENST00000395794 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.02■□□□□ 0.32
CXCL12-205ENST00000395794 UNCXA6NJT0 531 aa17.01■□□□□ 0.31
CXCL12-205ENST00000395794 TCP10L2B9ZVM9 353 aa17.01■□□□□ 0.31
CXCL12-205ENST00000395794 LDLRAD1Q5T700 205 aa17.01■□□□□ 0.31
CXCL12-205ENST00000395794 NBPF12Q5TAG4 269 aaPredicted RBP17.01■□□□□ 0.31
CXCL12-205ENST00000395794 ITPRIPQ8IWB1 547 aa17.01■□□□□ 0.31
CXCL12-205ENST00000395794 AOX1Q06278 1338 aa17■□□□□ 0.31
CXCL12-205ENST00000395794 LDHBP07195 334 aaKnown RBP17■□□□□ 0.31
CXCL12-205ENST00000395794 TIMM10P62072 90 aa17■□□□□ 0.31
CXCL12-205ENST00000395794 SREBF2Q12772 1141 aa17■□□□□ 0.31
CXCL12-205ENST00000395794 TFCP2Q12800 502 aa17■□□□□ 0.31
CXCL12-205ENST00000395794 MKRN3Q13064 507 aaKnown RBP17■□□□□ 0.31
CXCL12-205ENST00000395794 MVPQ14764 893 aaKnown RBP17■□□□□ 0.31
CXCL12-205ENST00000395794 MAP3K11Q16584 847 aa17■□□□□ 0.31
CXCL12-205ENST00000395794 GORABQ5T7V8 394 aa17■□□□□ 0.31
CXCL12-205ENST00000395794 HHIPL2Q6UWX4 724 aa17■□□□□ 0.31
CXCL12-205ENST00000395794 ZGPATQ8N5A5 531 aaKnown RBP17■□□□□ 0.31
CXCL12-205ENST00000395794 NEUROD6Q96NK8 337 aa17■□□□□ 0.31
CXCL12-205ENST00000395794 A0A1B0GUL7 405 aa16.99■□□□□ 0.31
CXCL12-205ENST00000395794 PHKA1P46020 1223 aa16.99■□□□□ 0.31
CXCL12-205ENST00000395794 CCDC102BQ68D86 513 aa16.99■□□□□ 0.31
CXCL12-205ENST00000395794 FZD1Q9UP38 647 aa16.99■□□□□ 0.31
CXCL12-205ENST00000395794 MS4A1P11836 297 aa16.98■□□□□ 0.31
CXCL12-205ENST00000395794 ADORA1P30542 326 aa16.98■□□□□ 0.31
CXCL12-205ENST00000395794 OS9Q13438 667 aaPredicted RBP16.98■□□□□ 0.31
CXCL12-205ENST00000395794 SPRYD7Q5W111 196 aa16.98■□□□□ 0.31
CXCL12-205ENST00000395794 ANKRD13AQ8IZ07 590 aa16.98■□□□□ 0.31
CXCL12-205ENST00000395794 HOOK2Q96ED9 719 aa16.98■□□□□ 0.31
CXCL12-205ENST00000395794 XAGE2Q96GT9 111 aa16.98■□□□□ 0.31
CXCL12-205ENST00000395794 ARAP2Q8WZ64 1704 aa16.98■□□□□ 0.31
CXCL12-205ENST00000395794 PNMA6EA0A0J9YXQ4 647 aa16.97■□□□□ 0.31
CXCL12-205ENST00000395794 TM4SF4P48230 202 aa16.97■□□□□ 0.31
CXCL12-205ENST00000395794 FKBP1CQ5VVH2 108 aa16.97■□□□□ 0.31
CXCL12-205ENST00000395794 APOBEC3HQ6NTF7 200 aaKnown RBP16.97■□□□□ 0.31
CXCL12-205ENST00000395794 TMEM39BQ9GZU3 492 aa16.97■□□□□ 0.31
CXCL12-205ENST00000395794 ECM29Q5VYK3 1845 aa16.97■□□□□ 0.31
CXCL12-205ENST00000395794 SALL1Q9NSC2 1324 aa16.96■□□□□ 0.31
CXCL12-205ENST00000395794 MANSC4A6NHS7 340 aaPredicted RBP16.96■□□□□ 0.31
CXCL12-205ENST00000395794 USP2O75604 605 aaPredicted RBP16.96■□□□□ 0.31
CXCL12-205ENST00000395794 ZBTB48P10074 688 aaPredicted RBP16.96■□□□□ 0.31
CXCL12-205ENST00000395794 CACNB3P54284 484 aa16.96■□□□□ 0.31
CXCL12-205ENST00000395794 INHBEP58166 350 aa16.96■□□□□ 0.31
CXCL12-205ENST00000395794 SPTY2D1Q68D10 685 aaPredicted RBP16.96■□□□□ 0.31
CXCL12-205ENST00000395794 FAM83AQ86UY5 434 aa16.96■□□□□ 0.31
CXCL12-205ENST00000395794 SLF2Q8IX21 1173 aa16.96■□□□□ 0.31
CXCL12-205ENST00000395794 SSC5DA1L4H1 1573 aa16.95■□□□□ 0.3
CXCL12-205ENST00000395794 ZBTB22O15209 634 aa16.95■□□□□ 0.3
CXCL12-205ENST00000395794 PRDX5P30044 214 aa16.95■□□□□ 0.3
CXCL12-205ENST00000395794 ATP8B2P98198 1209 aa16.95■□□□□ 0.3
CXCL12-205ENST00000395794 DZIP1Q86YF9 867 aaKnown RBP16.95■□□□□ 0.3
CXCL12-205ENST00000395794 ABHD8Q96I13 439 aa16.95■□□□□ 0.3
CXCL12-205ENST00000395794 WNK4Q96J92 1243 aa16.95■□□□□ 0.3
CXCL12-205ENST00000395794 CLMNQ96JQ2 1002 aa16.95■□□□□ 0.3
CXCL12-205ENST00000395794 TEPSINQ96N21 525 aa16.95■□□□□ 0.3
CXCL12-205ENST00000395794 ABCF2Q9UG63 623 aa16.95■□□□□ 0.3
CXCL12-205ENST00000395794 CSADQ9Y600 493 aa16.95■□□□□ 0.3
CXCL12-205ENST00000395794 PDS5AQ29RF7 1337 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms