RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 GJA5P36382 358 aa24.18■■□□□ 1.46
COL11A2-204ENST00000395194 SLFN5Q08AF3 891 aa24.18■■□□□ 1.46
COL11A2-204ENST00000395194 TNFAIP1Q13829 316 aa24.18■■□□□ 1.46
COL11A2-204ENST00000395194 IFNL1Q8IU54 200 aa24.18■■□□□ 1.46
COL11A2-204ENST00000395194 VGLL2Q8N8G2 317 aa24.18■■□□□ 1.46
COL11A2-204ENST00000395194 USP44Q9H0E7 712 aa24.18■■□□□ 1.46
COL11A2-204ENST00000395194 BCAMP50895 628 aa24.17■■□□□ 1.46
COL11A2-204ENST00000395194 CAVIN4Q5BKX8 364 aa24.17■■□□□ 1.46
COL11A2-204ENST00000395194 TMEM39BQ9GZU3 492 aa24.17■■□□□ 1.46
COL11A2-204ENST00000395194 ELP3Q9H9T3 547 aa24.17■■□□□ 1.46
COL11A2-204ENST00000395194 PDE8BO95263 885 aa24.16■■□□□ 1.46
COL11A2-204ENST00000395194 PKN2Q16513 984 aaKnown RBP24.16■■□□□ 1.46
COL11A2-204ENST00000395194 NOM1Q5C9Z4 860 aaKnown RBP24.16■■□□□ 1.46
COL11A2-204ENST00000395194 ANKRD13AQ8IZ07 590 aa24.16■■□□□ 1.46
COL11A2-204ENST00000395194 CFHR5Q9BXR6 569 aa24.16■■□□□ 1.46
COL11A2-204ENST00000395194 SMC4Q9NTJ3 1288 aa24.16■■□□□ 1.46
COL11A2-204ENST00000395194 ALDH1A1P00352 501 aa24.15■■□□□ 1.46
COL11A2-204ENST00000395194 CACNB3P54284 484 aa24.15■■□□□ 1.46
COL11A2-204ENST00000395194 TEPSINQ96N21 525 aa24.15■■□□□ 1.46
COL11A2-204ENST00000395194 HTTP42858 3142 aa24.13■■□□□ 1.45
COL11A2-204ENST00000395194 INHBEP58166 350 aa24.13■■□□□ 1.45
COL11A2-204ENST00000395194 FBXO46Q6PJ61 603 aaPredicted RBP24.13■■□□□ 1.45
COL11A2-204ENST00000395194 TBC1D22AQ8WUA7 517 aa24.13■■□□□ 1.45
COL11A2-204ENST00000395194 CNKSR2Q8WXI2 1034 aa24.13■■□□□ 1.45
COL11A2-204ENST00000395194 TNNI2P48788 182 aa24.12■■□□□ 1.45
COL11A2-204ENST00000395194 PUM3Q15397 648 aaKnown RBP24.12■■□□□ 1.45
COL11A2-204ENST00000395194 TEKT1Q969V4 418 aa24.12■■□□□ 1.45
COL11A2-204ENST00000395194 OPTNQ96CV9 577 aa24.12■■□□□ 1.45
COL11A2-204ENST00000395194 AK9Q5TCS8 1911 aa24.12■■□□□ 1.45
COL11A2-204ENST00000395194 CENPFP49454 3210 aa24.11■■□□□ 1.45
COL11A2-204ENST00000395194 UNCXA6NJT0 531 aa24.11■■□□□ 1.45
COL11A2-204ENST00000395194 IFIT1P09914 478 aaKnown RBP24.11■■□□□ 1.45
COL11A2-204ENST00000395194 RFX5P48382 616 aaPredicted RBP24.11■■□□□ 1.45
COL11A2-204ENST00000395194 CRHR2Q13324 411 aa24.11■■□□□ 1.45
COL11A2-204ENST00000395194 ALDH1L2Q3SY69 923 aa24.11■■□□□ 1.45
COL11A2-204ENST00000395194 SIL1Q9H173 461 aa24.11■■□□□ 1.45
COL11A2-204ENST00000395194 TRIM17Q9Y577 477 aa24.11■■□□□ 1.45
COL11A2-204ENST00000395194 EYA2O00167 538 aa24.1■■□□□ 1.45
COL11A2-204ENST00000395194 FGFR2P21802 821 aa24.1■■□□□ 1.45
COL11A2-204ENST00000395194 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.1■■□□□ 1.45
COL11A2-204ENST00000395194 PTPN18Q99952 460 aa24.1■■□□□ 1.45
COL11A2-204ENST00000395194 VGLL4Q14135 290 aa24.09■■□□□ 1.45
COL11A2-204ENST00000395194 SLC5A1P13866 664 aa24.08■■□□□ 1.45
COL11A2-204ENST00000395194 HDLBPQ00341 1268 aaKnown RBP24.08■■□□□ 1.45
COL11A2-204ENST00000395194 OTUD7BQ6GQQ9 843 aa24.08■■□□□ 1.45
COL11A2-204ENST00000395194 UBTFL1P0CB47 393 aaPredicted RBP24.07■■□□□ 1.44
COL11A2-204ENST00000395194 MAP3K9P80192 1104 aa24.07■■□□□ 1.44
COL11A2-204ENST00000395194 OTOP1Q7RTM1 612 aa24.07■■□□□ 1.44
COL11A2-204ENST00000395194 CD99L2Q8TCZ2 262 aa24.07■■□□□ 1.44
COL11A2-204ENST00000395194 TMOD2Q9NZR1 351 aa24.07■■□□□ 1.44
COL11A2-204ENST00000395194 NOB1Q9ULX3 412 aaKnown RBP24.07■■□□□ 1.44
COL11A2-204ENST00000395194 KIAA0100Q14667 2235 aaKnown RBP24.07■■□□□ 1.44
COL11A2-204ENST00000395194 APOBEC3HQ6NTF7 200 aaKnown RBP24.06■■□□□ 1.44
COL11A2-204ENST00000395194 ATG9AQ7Z3C6 839 aa24.06■■□□□ 1.44
COL11A2-204ENST00000395194 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.06■■□□□ 1.44
COL11A2-204ENST00000395194 LPIN2Q92539 896 aa24.06■■□□□ 1.44
COL11A2-204ENST00000395194 OTUD5Q96G74 571 aa24.06■■□□□ 1.44
COL11A2-204ENST00000395194 MS4A4AQ96JQ5 239 aa24.06■■□□□ 1.44
COL11A2-204ENST00000395194 ZDHHC15Q96MV8 337 aa24.06■■□□□ 1.44
COL11A2-204ENST00000395194 CSADQ9Y600 493 aa24.06■■□□□ 1.44
COL11A2-204ENST00000395194 MAST3O60307 1309 aa24.06■■□□□ 1.44
COL11A2-204ENST00000395194 KIF16BQ96L93 1317 aa24.06■■□□□ 1.44
COL11A2-204ENST00000395194 BRI3BPQ8WY22 251 aa24.05■■□□□ 1.44
COL11A2-204ENST00000395194 CCL15-CCL14A0A0B4J2E2 113 aa24.04■■□□□ 1.44
COL11A2-204ENST00000395194 TESPA1A2RU30 521 aaPredicted RBP24.04■■□□□ 1.44
COL11A2-204ENST00000395194 CCL15Q16663 113 aa24.04■■□□□ 1.44
COL11A2-204ENST00000395194 TRMT2AQ8IZ69 625 aaKnown RBP24.04■■□□□ 1.44
COL11A2-204ENST00000395194 ERO1AQ96HE7 468 aa24.04■■□□□ 1.44
COL11A2-204ENST00000395194 PA2G4Q9UQ80 394 aaKnown RBP24.04■■□□□ 1.44
COL11A2-204ENST00000395194 LRRFIP2Q9Y608 721 aaKnown RBP24.04■■□□□ 1.44
COL11A2-204ENST00000395194 CAP1Q01518 475 aa24.03■■□□□ 1.44
COL11A2-204ENST00000395194 DIXDC1Q155Q3 683 aa24.03■■□□□ 1.44
COL11A2-204ENST00000395194 WRNIP1Q96S55 665 aa24.03■■□□□ 1.44
COL11A2-204ENST00000395194 TAF1CQ15572 869 aaPredicted RBP24.02■■□□□ 1.44
COL11A2-204ENST00000395194 ATP2B3Q16720 1220 aa24.02■■□□□ 1.44
COL11A2-204ENST00000395194 HHIPL2Q6UWX4 724 aa24.02■■□□□ 1.44
COL11A2-204ENST00000395194 WDR66Q8TBY9 1149 aa24.02■■□□□ 1.44
COL11A2-204ENST00000395194 ZKSCAN4Q969J2 545 aaPredicted RBP24.02■■□□□ 1.44
COL11A2-204ENST00000395194 SUGT1Q9Y2Z0 365 aa24.02■■□□□ 1.44
COL11A2-204ENST00000395194 ZSWIM8A7E2V4 1837 aa24.02■■□□□ 1.44
COL11A2-204ENST00000395194 SLC34A2O95436 690 aa24.01■■□□□ 1.43
COL11A2-204ENST00000395194 PRDX5P30044 214 aa24.01■■□□□ 1.43
COL11A2-204ENST00000395194 GTF2A2P52657 109 aa24.01■■□□□ 1.43
COL11A2-204ENST00000395194 SP3Q02447 781 aa24.01■■□□□ 1.43
COL11A2-204ENST00000395194 MIGA2Q7L4E1 593 aa24.01■■□□□ 1.43
COL11A2-204ENST00000395194 FAM83AQ86UY5 434 aa24.01■■□□□ 1.43
COL11A2-204ENST00000395194 CEP126Q9P2H0 1117 aa24.01■■□□□ 1.43
COL11A2-204ENST00000395194 SNCAIPQ9Y6H5 919 aa24.01■■□□□ 1.43
COL11A2-204ENST00000395194 MYH2Q9UKX2 1941 aa24.01■■□□□ 1.43
COL11A2-204ENST00000395194 BRCA2P51587 3418 aa24.01■■□□□ 1.43
COL11A2-204ENST00000395194 MKI67P46013 3256 aaKnown RBP24.01■■□□□ 1.43
COL11A2-204ENST00000395194 FAM43AQ8N2R8 423 aa24■■□□□ 1.43
COL11A2-204ENST00000395194 MEIS3Q99687 375 aa24■■□□□ 1.43
COL11A2-204ENST00000395194 MRIQ9BWK5 157 aa24■■□□□ 1.43
COL11A2-204ENST00000395194 API5Q9BZZ5 524 aaKnown RBP24■■□□□ 1.43
COL11A2-204ENST00000395194 EFCC1Q9HA90 598 aa24■■□□□ 1.43
COL11A2-204ENST00000395194 DAGLAQ9Y4D2 1042 aa24■■□□□ 1.43
COL11A2-204ENST00000395194 SPDYE5A6NIY4 337 aa23.99■■□□□ 1.43
COL11A2-204ENST00000395194 PHKA1P46020 1223 aa23.99■■□□□ 1.43
COL11A2-204ENST00000395194 TCP10Q12799 353 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms