RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 AXDND1Q5T1B0 1012 aaPredicted RBP15.24■□□□□ 0.03
NFKB1-202ENST00000394820 PPFIBP1Q86W92 1011 aa15.24■□□□□ 0.03
NFKB1-202ENST00000394820 AIFM3Q96NN9 605 aa15.24■□□□□ 0.03
NFKB1-202ENST00000394820 FEZ1Q99689 392 aa15.24■□□□□ 0.03
NFKB1-202ENST00000394820 RAI14Q9P0K7 980 aa15.24■□□□□ 0.03
NFKB1-202ENST00000394820 PCDH11XQ9BZA7 1347 aa15.24■□□□□ 0.03
NFKB1-202ENST00000394820 PCDH11YQ9BZA8 1340 aa15.24■□□□□ 0.03
NFKB1-202ENST00000394820 SNAP23O00161 211 aa15.24■□□□□ 0.03
NFKB1-202ENST00000394820 EYA2O00167 538 aa15.24■□□□□ 0.03
NFKB1-202ENST00000394820 DHX16O60231 1041 aaKnown RBP15.24■□□□□ 0.03
NFKB1-202ENST00000394820 ST3GAL1Q11201 340 aa15.24■□□□□ 0.03
NFKB1-202ENST00000394820 EEF2KMTQ96G04 330 aa15.24■□□□□ 0.03
NFKB1-202ENST00000394820 SLC26A6Q9BXS9 759 aa15.24■□□□□ 0.03
NFKB1-202ENST00000394820 MINDY4BA8MYZ0 360 aa15.24■□□□□ 0.03
NFKB1-202ENST00000394820 ZNF213O14771 459 aa15.24■□□□□ 0.03
NFKB1-202ENST00000394820 EVCP57679 992 aa15.24■□□□□ 0.03
NFKB1-202ENST00000394820 TOB2Q14106 344 aaPredicted RBP15.24■□□□□ 0.03
NFKB1-202ENST00000394820 DHX32Q7L7V1 743 aaKnown RBP15.24■□□□□ 0.03
NFKB1-202ENST00000394820 KBTBD3Q8NAB2 608 aa15.24■□□□□ 0.03
NFKB1-202ENST00000394820 CLIC4Q9Y696 253 aa15.24■□□□□ 0.03
NFKB1-202ENST00000394820 TPM1P09493 284 aa15.23■□□□□ 0.03
NFKB1-202ENST00000394820 NAP1L1P55209 391 aaKnown RBP15.23■□□□□ 0.03
NFKB1-202ENST00000394820 FAM160A1Q05DH4 1040 aa15.23■□□□□ 0.03
NFKB1-202ENST00000394820 CLIC6Q96NY7 704 aa15.23■□□□□ 0.03
NFKB1-202ENST00000394820 CTAGE5O15320 804 aa15.23■□□□□ 0.03
NFKB1-202ENST00000394820 PRC1O43663 620 aa15.23■□□□□ 0.03
NFKB1-202ENST00000394820 KIF20AO95235 890 aa15.23■□□□□ 0.03
NFKB1-202ENST00000394820 IL15P40933 162 aaPredicted RBP15.23■□□□□ 0.03
NFKB1-202ENST00000394820 RFX5P48382 616 aaPredicted RBP15.23■□□□□ 0.03
NFKB1-202ENST00000394820 KMT5BQ4FZB7 885 aa15.23■□□□□ 0.03
NFKB1-202ENST00000394820 CAGE1Q8TC20 777 aa15.23■□□□□ 0.03
NFKB1-202ENST00000394820 ALG1Q9BT22 464 aa15.23■□□□□ 0.03
NFKB1-202ENST00000394820 TM6SF1Q9BZW5 370 aa15.22■□□□□ 0.03
NFKB1-202ENST00000394820 PCDHA7Q9UN72 937 aa15.22■□□□□ 0.03
NFKB1-202ENST00000394820 MAPK8IP1Q9UQF2 711 aa15.22■□□□□ 0.03
NFKB1-202ENST00000394820 PNOCQ13519 176 aa15.22■□□□□ 0.03
NFKB1-202ENST00000394820 TSR1Q2NL82 804 aaKnown RBP15.22■□□□□ 0.03
NFKB1-202ENST00000394820 ABCF2Q9UG63 623 aa15.22■□□□□ 0.03
NFKB1-202ENST00000394820 NCAPD2Q15021 1401 aa15.22■□□□□ 0.03
NFKB1-202ENST00000394820 STARD3NLO95772 234 aa15.22■□□□□ 0.03
NFKB1-202ENST00000394820 ZAP70P43403 619 aa15.22■□□□□ 0.03
NFKB1-202ENST00000394820 GSDMDP57764 484 aa15.22■□□□□ 0.03
NFKB1-202ENST00000394820 XAGE2Q96GT9 111 aa15.22■□□□□ 0.03
NFKB1-202ENST00000394820 HAUS7Q99871 368 aa15.22■□□□□ 0.03
NFKB1-202ENST00000394820 USP42Q9H9J4 1324 aaKnown RBP15.22■□□□□ 0.03
NFKB1-202ENST00000394820 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.22■□□□□ 0.032e-6■■■□□ 14.9
NFKB1-202ENST00000394820 ZNF202O95125 648 aa15.21■□□□□ 0.03
NFKB1-202ENST00000394820 ADD1P35611 737 aaKnown RBP15.21■□□□□ 0.03
NFKB1-202ENST00000394820 FOXO4P98177 505 aa15.21■□□□□ 0.03
NFKB1-202ENST00000394820 FANCCQ00597 558 aa15.21■□□□□ 0.03
NFKB1-202ENST00000394820 PATL2C9JE40 543 aaKnown RBP15.21■□□□□ 0.03
NFKB1-202ENST00000394820 GOLPH3LQ9H4A5 285 aa15.21■□□□□ 0.03
NFKB1-202ENST00000394820 HMG20BQ9P0W2 317 aa15.21■□□□□ 0.03
NFKB1-202ENST00000394820 FAM208AQ9UK61 1670 aaKnown RBP15.21■□□□□ 0.03
NFKB1-202ENST00000394820 HEG1Q9ULI3 1381 aa15.21■□□□□ 0.02
NFKB1-202ENST00000394820 WDR17Q8IZU2 1322 aa15.21■□□□□ 0.02
NFKB1-202ENST00000394820 ERCC3P19447 782 aa15.21■□□□□ 0.02
NFKB1-202ENST00000394820 HLFQ16534 295 aa15.21■□□□□ 0.02
NFKB1-202ENST00000394820 LEKR1Q6ZMV7 388 aa15.21■□□□□ 0.02
NFKB1-202ENST00000394820 ERO1AQ96HE7 468 aa15.21■□□□□ 0.02
NFKB1-202ENST00000394820 FAM170AA1A519 330 aa15.2■□□□□ 0.02
NFKB1-202ENST00000394820 RAD21O60216 631 aa15.2■□□□□ 0.02
NFKB1-202ENST00000394820 MATR3P43243 847 aaKnown RBP eCLIP15.2■□□□□ 0.021e-7■■■□□ 15.4
NFKB1-202ENST00000394820 STOX1Q6ZVD7 989 aa15.2■□□□□ 0.02
NFKB1-202ENST00000394820 ERICH2A1L162 156 aa15.2■□□□□ 0.02
NFKB1-202ENST00000394820 ENOX2Q16206 610 aaKnown RBP15.2■□□□□ 0.02
NFKB1-202ENST00000394820 BICDL1Q6ZP65 573 aa15.2■□□□□ 0.02
NFKB1-202ENST00000394820 ATG9AQ7Z3C6 839 aa15.2■□□□□ 0.02
NFKB1-202ENST00000394820 SCARF1Q14162 830 aa15.2■□□□□ 0.02
NFKB1-202ENST00000394820 KRBA2Q6ZNG9 492 aa15.2■□□□□ 0.02
NFKB1-202ENST00000394820 JMYQ8N9B5 988 aa15.2■□□□□ 0.02
NFKB1-202ENST00000394820 CCDC191Q8NCU4 936 aa15.2■□□□□ 0.02
NFKB1-202ENST00000394820 PIGBQ92521 554 aa15.2■□□□□ 0.02
NFKB1-202ENST00000394820 CALCOCO1Q9P1Z2 691 aa15.2■□□□□ 0.02
NFKB1-202ENST00000394820 H7C1W4 665 aa15.19■□□□□ 0.02
NFKB1-202ENST00000394820 IFIT3O14879 490 aaKnown RBP15.19■□□□□ 0.02
NFKB1-202ENST00000394820 RNF113AO15541 343 aaKnown RBP15.19■□□□□ 0.02
NFKB1-202ENST00000394820 NEMFO60524 1076 aa15.19■□□□□ 0.02
NFKB1-202ENST00000394820 VPS18Q9P253 973 aa15.19■□□□□ 0.02
NFKB1-202ENST00000394820 M0R2C6 588 aa15.19■□□□□ 0.02
NFKB1-202ENST00000394820 HSPD1P10809 573 aaKnown RBP15.19■□□□□ 0.02
NFKB1-202ENST00000394820 GTF2E1P29083 439 aaPredicted RBP15.19■□□□□ 0.02
NFKB1-202ENST00000394820 TDO2P48775 406 aa15.19■□□□□ 0.02
NFKB1-202ENST00000394820 METAP2P50579 478 aaKnown RBP eCLIP15.19■□□□□ 0.02
NFKB1-202ENST00000394820 DNAJC21Q5F1R6 531 aaKnown RBP15.19■□□□□ 0.02
NFKB1-202ENST00000394820 SPTLC3Q9NUV7 552 aa15.19■□□□□ 0.02
NFKB1-202ENST00000394820 CTNNA3Q9UI47 895 aa15.19■□□□□ 0.02
NFKB1-202ENST00000394820 HOOK1Q9UJC3 728 aaKnown RBP15.19■□□□□ 0.02
NFKB1-202ENST00000394820 UTYO14607 1347 aa15.19■□□□□ 0.02
NFKB1-202ENST00000394820 OSBP2Q969R2 916 aa15.19■□□□□ 0.02
NFKB1-202ENST00000394820 DRC1Q96MC2 740 aa15.19■□□□□ 0.02
NFKB1-202ENST00000394820 GOLGA8AA7E2F4 631 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 JAKMIP3Q5VZ66 844 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 NOC3LQ8WTT2 800 aaKnown RBP15.18■□□□□ 0.02
NFKB1-202ENST00000394820 PLEKHA4Q9H4M7 779 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 RSPH14Q9UHP6 348 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 ZNF609O15014 1411 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 E7EWF7 191 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 EPB41L2O43491 1005 aaKnown RBP15.18■□□□□ 0.02
NFKB1-202ENST00000394820 ITGA6P23229 1130 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms