RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 LRCH3Q96II8 777 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 CES1P23141 567 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 DALRD3Q5D0E6 543 aaKnown RBP4.27□□□□□ -1.73
XRN1-202ENST00000392981 PGM2L1Q6PCE3 622 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 KRT25Q7Z3Z0 450 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 FLCNQ8NFG4 579 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 BAP1Q92560 729 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 DPF3Q92784 378 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 RPGRQ92834 1020 aaKnown RBP4.27□□□□□ -1.73
XRN1-202ENST00000392981 RELTQ969Z4 430 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 UNC93B1Q9H1C4 597 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 SCTRP47872 440 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 ECM1Q16610 540 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 INO80DQ53TQ3 878 aaPredicted RBP4.26□□□□□ -1.73
XRN1-202ENST00000392981 MMS22LQ6ZRQ5 1243 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 SRLQ86TD4 932 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 ALDH16A1Q8IZ83 802 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 RIN3Q8TB24 985 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 GPKOWQ92917 476 aaPredicted RBP eCLIP4.26□□□□□ -1.73
XRN1-202ENST00000392981 TMEM74Q96NL1 305 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 OXCT2Q9BYC2 517 aaPredicted RBP4.26□□□□□ -1.73
XRN1-202ENST00000392981 PHF20L1A8MW92 1017 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 PF4V1P10720 104 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 EPB42P16452 691 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 NAP1L1P55209 391 aaKnown RBP4.26□□□□□ -1.73
XRN1-202ENST00000392981 IRX5P78411 483 aaPredicted RBP4.26□□□□□ -1.73
XRN1-202ENST00000392981 PIN1Q13526 163 aaPredicted RBP4.26□□□□□ -1.73
XRN1-202ENST00000392981 MYBPC2Q14324 1141 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 PDCD2Q16342 344 aaPredicted RBP4.26□□□□□ -1.73
XRN1-202ENST00000392981 LONRF1Q17RB8 773 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 ARSJQ5FYB0 599 aaPredicted RBP4.26□□□□□ -1.73
XRN1-202ENST00000392981 MORN1Q5T089 497 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 PHTF2Q8N3S3 785 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 BTN2A2Q8WVV5 523 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 FAM129BQ96TA1 746 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 TMEM121BQ9BXQ6 578 aaPredicted RBP4.26□□□□□ -1.73
XRN1-202ENST00000392981 CHST12Q9NRB3 414 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 CNTN3Q9P232 1028 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 GRIN3BO60391 1043 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 ADD2P35612 726 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 CASP2P42575 452 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 C2orf27AQ580R0 203 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 ADAT2Q7Z6V5 191 aaKnown RBP4.26□□□□□ -1.73
XRN1-202ENST00000392981 FOXJ1Q92949 421 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 ATP6V1E1P36543 226 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 SERINC3Q13530 473 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 RHPN1Q8TCX5 695 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 NLRP3Q96P20 1036 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 PRR14Q9BWN1 585 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 MIR1-1HGQ9H1L0 117 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 PCDH10Q9P2E7 1040 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 ZNF652Q9Y2D9 606 aa4.26□□□□□ -1.73
XRN1-202ENST00000392981 RPLP1P05386 114 aaKnown RBP4.25□□□□□ -1.73
XRN1-202ENST00000392981 RAG1P15918 1043 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 HMGN5P82970 282 aaKnown RBP4.25□□□□□ -1.73
XRN1-202ENST00000392981 TBC1D8BQ0IIM8 1120 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 PLCB4Q15147 1175 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 C11orf91Q3C1V1 193 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 DESI1Q6ICB0 168 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 SKA1Q96BD8 255 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 ACSBG1Q96GR2 724 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 MKS1Q9NXB0 559 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 KANSL3Q9P2N6 904 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 MRFAP1Q9Y605 127 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 FAM177BA6PVY3 158 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 TIPRLO75663 272 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 RBM10P98175 930 aaKnown RBP4.25□□□□□ -1.73
XRN1-202ENST00000392981 ERFEQ4G0M1 354 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 ETFBKMTQ8IXQ9 262 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 CLASRPQ8N2M8 674 aaKnown RBP4.25□□□□□ -1.73
XRN1-202ENST00000392981 CAMKK1Q8N5S9 505 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 SNX29Q8TEQ0 813 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 EAF1Q96JC9 268 aaPredicted RBP4.25□□□□□ -1.73
XRN1-202ENST00000392981 ZNF512BQ96KM6 892 aaPredicted RBP4.25□□□□□ -1.73
XRN1-202ENST00000392981 KCTD15Q96SI1 283 aaPredicted RBP4.25□□□□□ -1.73
XRN1-202ENST00000392981 PHACTR1Q9C0D0 580 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 IGFLR1Q9H665 355 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 LRCH1Q9Y2L9 728 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 CEP83Q9Y592 693 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 RPS6KL1Q9Y6S9 549 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 GIPC1O14908 333 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 ZNF165P49910 485 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 DOK7Q18PE1 504 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 CCDC149Q6ZUS6 474 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 NCAPG2Q86XI2 1143 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 TTC1Q99614 292 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 SPSB2Q99619 263 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 GGNBP2Q9H3C7 697 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 PRDM11Q9NQV5 511 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 PCDHB10Q9UN67 800 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 A6NJY4 79 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 SCNN1BP51168 640 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 CFAP58Q5T655 872 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 SCUBE3Q8IX30 993 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 IFNL3Q8IZI9 196 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 MPP4Q96JB8 637 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 TRHDEQ9UKU6 1024 aa4.25□□□□□ -1.73
XRN1-202ENST00000392981 DIS3Q9Y2L1 958 aaKnown RBP4.25□□□□□ -1.73
XRN1-202ENST00000392981 TNFAIP3P21580 790 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 MLECQ14165 292 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms