RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 TPCN1Q9ULQ1 816 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 PAXBP1Q9Y5B6 917 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 MAGI2Q86UL8 1455 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 YTHDC2Q9H6S0 1430 aaKnown RBP5.68□□□□□ -1.5
LTN1-202ENST00000389194 CHMP2AO43633 222 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 ATRIPQ8WXE1 791 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 DUOX2Q9NRD8 1548 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 MAGI3Q5TCQ9 1506 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 CAPN2P17655 700 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 FAM182BQ5T319 152 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 WWC2Q6AWC2 1192 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 ZNF287Q9HBT7 754 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 VPS54Q9P1Q0 977 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 POGZQ7Z3K3 1410 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 ADD1P35611 737 aaKnown RBP5.67□□□□□ -1.5
LTN1-202ENST00000389194 LRRC24Q50LG9 513 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 DCAF17Q5H9S7 520 aaPredicted RBP5.67□□□□□ -1.5
LTN1-202ENST00000389194 CCDC25Q86WR0 208 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 DNAJC10Q8IXB1 793 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 BAG3O95817 575 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 CTNNA2P26232 953 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 MTX1Q13505 466 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 CLIC6Q96NY7 704 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 RAB34Q9BZG1 259 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 KRT23Q9C075 422 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 DDX21Q9NR30 783 aaKnown RBP eCLIP5.67□□□□□ -1.5
LTN1-202ENST00000389194 TTC41PQ6P2S7 1318 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 CTAGE15A4D2H0 777 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 VGLL3A8MV65 326 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 CTAGE8P0CG41 777 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 RAPGEF1Q13905 1077 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 BEND3Q5T5X7 828 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 DYMQ7RTS9 669 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 CTAGE6Q86UF2 777 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 CTAGE4Q8IX94 777 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 SDR42E1Q8WUS8 393 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 UBE2Q2Q8WVN8 375 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 CUL5Q93034 780 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 BICD1Q96G01 975 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 NLRP3Q96P20 1036 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 UHRF1BP1LA0JNW5 1464 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 RNF123Q5XPI4 1314 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 KRT13P13646 458 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 EVCP57679 992 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 PI16Q6UXB8 463 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 FCHSD1Q86WN1 690 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 MRVI1Q9Y6F6 885 aa5.67□□□□□ -1.5
LTN1-202ENST00000389194 ZNF202O95125 648 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 IL2RBP14784 551 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 TCP10Q12799 353 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 DDB1Q16531 1140 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 TRIM31Q9BZY9 425 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 CTAGE9A4FU28 777 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 SORBS3O60504 671 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 NEMFO60524 1076 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 MAP9Q49MG5 647 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 GJB4Q9NTQ9 266 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 UGGT1Q9NYU2 1555 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 CCDC175P0C221 793 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 UQCRFS1P1P0C7P4 283 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 HARSP12081 509 aaKnown RBP5.66□□□□□ -1.5
LTN1-202ENST00000389194 ALS2CR12Q96Q35 445 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 BAG1Q99933 345 aaPredicted RBP5.66□□□□□ -1.5
LTN1-202ENST00000389194 PUS3Q9BZE2 481 aaKnown RBP5.66□□□□□ -1.5
LTN1-202ENST00000389194 GBP3Q9H0R5 595 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 TAB2Q9NYJ8 693 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 WDR62O43379 1518 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 KIF20AO95235 890 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 GBP2P32456 591 aaPredicted RBP5.66□□□□□ -1.5
LTN1-202ENST00000389194 KRT2P35908 639 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 VPS36Q86VN1 386 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 IP6K1Q92551 441 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 CFAP43Q8NDM7 1665 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 DDX39AO00148 427 aaKnown RBP5.66□□□□□ -1.5
LTN1-202ENST00000389194 TXKP42681 527 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 IRX5P78411 483 aaPredicted RBP5.66□□□□□ -1.5
LTN1-202ENST00000389194 ANO1Q5XXA6 986 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 SIRT2Q8IXJ6 389 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 DIS3L2Q8IYB7 885 aaKnown RBP5.66□□□□□ -1.5
LTN1-202ENST00000389194 INTS4Q96HW7 963 aaKnown RBP5.66□□□□□ -1.5
LTN1-202ENST00000389194 USP28Q96RU2 1077 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 KCNH3Q9ULD8 1083 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 ITSN2Q9NZM3 1697 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 RAD50Q92878 1312 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 EYA2O00167 538 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 FANCCQ00597 558 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 CCDC42Q96M95 316 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 TTC21AQ8NDW8 1320 aa5.66□□□□□ -1.5
LTN1-202ENST00000389194 GNPATO15228 680 aa5.65□□□□□ -1.5
LTN1-202ENST00000389194 ADORA1P30542 326 aa5.65□□□□□ -1.5
LTN1-202ENST00000389194 HPDP32754 393 aaPredicted RBP5.65□□□□□ -1.5
LTN1-202ENST00000389194 ZNF75DP51815 510 aa5.65□□□□□ -1.5
LTN1-202ENST00000389194 GCKRQ14397 625 aa5.65□□□□□ -1.5
LTN1-202ENST00000389194 CADPS2Q86UW7 1296 aa5.65□□□□□ -1.5
LTN1-202ENST00000389194 IGSF22Q8N9C0 903 aa5.65□□□□□ -1.5
LTN1-202ENST00000389194 METTL22Q9BUU2 404 aaPredicted RBP5.65□□□□□ -1.5
LTN1-202ENST00000389194 PTPRTO14522 1441 aa5.65□□□□□ -1.5
LTN1-202ENST00000389194 ZNF532Q9HCE3 1301 aa5.65□□□□□ -1.5
LTN1-202ENST00000389194 GOLGA6L7A0A1B0GV03 622 aa5.65□□□□□ -1.5
LTN1-202ENST00000389194 PSMA7O14818 248 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms