RNA–Protein interactions for RNA: ENST00000384245.1

RNU6-17P-201, Transcript of RNA, U6 small nuclear 17, pseudogene, humanhuman

BASIC

Gene RNU6-17P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-17P-201ENST00000384245 ABCB6Q9NP58 842 aa4.39□□□□□ -1.71
RNU6-17P-201ENST00000384245 WWC3Q9ULE0 1092 aa4.39□□□□□ -1.71
RNU6-17P-201ENST00000384245 LOC100289279A0A1B0GTE1 492 aa4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 PATL2C9JE40 543 aaKnown RBP4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 SART1O43290 800 aaKnown RBP4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 ECEL1O95672 775 aa4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 CTSBP07858 339 aa4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 ITPKAP23677 461 aa4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 PREPP48147 710 aa4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 FZD5Q13467 585 aa4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 LRP8Q14114 963 aa4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 ENOX2Q16206 610 aaKnown RBP4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 NXPE4Q6UWF7 544 aa4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 PRR23CQ6ZRP0 262 aa4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 ARMC10Q8N2F6 343 aa4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 UTP4Q969X6 686 aaKnown RBP4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 BCO2Q9BYV7 579 aa4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 RNF208Q9H0X6 261 aa4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 SOX17Q9H6I2 414 aaPredicted RBP4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 TRAK1Q9UPV9 953 aa4.38□□□□□ -1.71
RNU6-17P-201ENST00000384245 MAOBP27338 520 aa4.37□□□□□ -1.71
RNU6-17P-201ENST00000384245 FMR1Q06787 632 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNU6-17P-201ENST00000384245 FAAP100Q0VG06 881 aa4.37□□□□□ -1.71
RNU6-17P-201ENST00000384245 POU4F3Q15319 338 aa4.37□□□□□ -1.71
RNU6-17P-201ENST00000384245 NUTM2GQ5VZR2 741 aa4.37□□□□□ -1.71
RNU6-17P-201ENST00000384245 PRPF40BQ6NWY9 871 aaKnown RBP4.37□□□□□ -1.71
RNU6-17P-201ENST00000384245 FDX2Q6P4F2 183 aa4.37□□□□□ -1.71
RNU6-17P-201ENST00000384245 DTHD1Q6ZMT9 781 aa4.37□□□□□ -1.71
RNU6-17P-201ENST00000384245 C12orf50Q8NA57 414 aaPredicted RBP4.37□□□□□ -1.71
RNU6-17P-201ENST00000384245 FAM46AQ96IP4 442 aaKnown RBP4.37□□□□□ -1.71
RNU6-17P-201ENST00000384245 FMNL2Q96PY5 1086 aa4.37□□□□□ -1.71
RNU6-17P-201ENST00000384245 TRIM56Q9BRZ2 755 aaKnown RBP4.37□□□□□ -1.71
RNU6-17P-201ENST00000384245 DHX15O43143 795 aaKnown RBP4.36□□□□□ -1.71
RNU6-17P-201ENST00000384245 B3GALT4O96024 378 aa4.36□□□□□ -1.71
RNU6-17P-201ENST00000384245 P4HBP07237 508 aaKnown RBP4.36□□□□□ -1.71
RNU6-17P-201ENST00000384245 DRD2P14416 443 aa4.36□□□□□ -1.71
RNU6-17P-201ENST00000384245 EXOSC6Q5RKV6 272 aaKnown RBP4.36□□□□□ -1.71
RNU6-17P-201ENST00000384245 ANKRD34AQ69YU3 496 aa4.36□□□□□ -1.71
RNU6-17P-201ENST00000384245 SND1Q7KZF4 910 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNU6-17P-201ENST00000384245 TMPRSS13Q9BYE2 586 aa4.36□□□□□ -1.71
RNU6-17P-201ENST00000384245 ZC3H12CQ9C0D7 883 aaKnown RBP4.36□□□□□ -1.71
RNU6-17P-201ENST00000384245 NRSN2Q9GZP1 204 aa4.36□□□□□ -1.71
RNU6-17P-201ENST00000384245 KCNF1Q9H3M0 494 aa4.36□□□□□ -1.71
RNU6-17P-201ENST00000384245 PPP4R2Q9NY27 417 aa4.36□□□□□ -1.71
RNU6-17P-201ENST00000384245 GPN3Q9UHW5 284 aaPredicted RBP4.36□□□□□ -1.71
RNU6-17P-201ENST00000384245 AKAP2Q9Y2D5 859 aa4.36□□□□□ -1.71
RNU6-17P-201ENST00000384245 RAXQ9Y2V3 346 aa4.36□□□□□ -1.71
RNU6-17P-201ENST00000384245 HMX2A2RU54 273 aa4.35□□□□□ -1.71
RNU6-17P-201ENST00000384245 MEGF11A6BM72 1044 aa4.35□□□□□ -1.71
RNU6-17P-201ENST00000384245 GAS2O43903 313 aaKnown RBP4.35□□□□□ -1.71
RNU6-17P-201ENST00000384245 CYP11A1P05108 521 aa4.35□□□□□ -1.71
RNU6-17P-201ENST00000384245 BMP3P12645 472 aa4.35□□□□□ -1.71
RNU6-17P-201ENST00000384245 TXKP42681 527 aa4.35□□□□□ -1.71
RNU6-17P-201ENST00000384245 PTPN12Q05209 780 aaKnown RBP4.35□□□□□ -1.71
RNU6-17P-201ENST00000384245 MYRFLQ96LU7 910 aa4.35□□□□□ -1.71
RNU6-17P-201ENST00000384245 CORO1BQ9BR76 489 aa4.35□□□□□ -1.71
RNU6-17P-201ENST00000384245 OSBPL7Q9BZF2 842 aa4.35□□□□□ -1.71
RNU6-17P-201ENST00000384245 CYP4F12Q9HCS2 524 aa4.35□□□□□ -1.71
RNU6-17P-201ENST00000384245 STOML1Q9UBI4 398 aa4.35□□□□□ -1.71
RNU6-17P-201ENST00000384245 ANKRD33BA6NCL7 494 aa4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 PAX4O43316 350 aa4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 HYAL3O43820 417 aaPredicted RBP4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 LDHBP07195 334 aaKnown RBP4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 FSTP19883 344 aa4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 RXRBP28702 533 aa4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 ATP2B2Q01814 1243 aa4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 PDE3AQ14432 1141 aa4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 UVSSAQ2YD98 709 aa4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 SGO2Q562F6 1265 aa4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 RPS26P11Q5JNZ5 115 aaPredicted RBP4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 AKAP4Q5JQC9 854 aa4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 ALG1LQ6GMV1 187 aa4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 TRIM42Q8IWZ5 723 aa4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 FAM20CQ8IXL6 584 aa4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 SMG8Q8ND04 991 aaKnown RBP4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 DDX54Q8TDD1 881 aaKnown RBP4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 GZF1Q9H116 711 aaPredicted RBP4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 C7orf69Q9H7B7 122 aa4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 RAD18Q9NS91 495 aa4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 RNF19AQ9NV58 838 aa4.34□□□□□ -1.71
RNU6-17P-201ENST00000384245 FBXO24O75426 580 aa4.33□□□□□ -1.72
RNU6-17P-201ENST00000384245 TIAF1O95411 115 aa4.33□□□□□ -1.72
RNU6-17P-201ENST00000384245 LIG1P18858 919 aa4.33□□□□□ -1.72
RNU6-17P-201ENST00000384245 SOX4Q06945 474 aaPredicted RBP4.33□□□□□ -1.72
RNU6-17P-201ENST00000384245 CDPF1Q6NVV7 123 aa4.33□□□□□ -1.72
RNU6-17P-201ENST00000384245 TPTE2Q6XPS3 522 aa4.33□□□□□ -1.72
RNU6-17P-201ENST00000384245 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.33□□□□□ -1.72
RNU6-17P-201ENST00000384245 BEND4Q6ZU67 534 aa4.33□□□□□ -1.72
RNU6-17P-201ENST00000384245 STK35Q8TDR2 534 aa4.33□□□□□ -1.72
RNU6-17P-201ENST00000384245 FBF1Q8TES7 1133 aa4.33□□□□□ -1.72
RNU6-17P-201ENST00000384245 FBLIM1Q8WUP2 373 aa4.33□□□□□ -1.72
RNU6-17P-201ENST00000384245 SUGCTQ9HAC7 445 aa4.33□□□□□ -1.72
RNU6-17P-201ENST00000384245 TMEM39AQ9NV64 488 aa4.33□□□□□ -1.72
RNU6-17P-201ENST00000384245 EIF4EBP3O60516 100 aaPredicted RBP4.32□□□□□ -1.72
RNU6-17P-201ENST00000384245 ADH5P11766 374 aa4.32□□□□□ -1.72
RNU6-17P-201ENST00000384245 MAP4P27816 1152 aaKnown RBP4.32□□□□□ -1.72
RNU6-17P-201ENST00000384245 USP11P51784 963 aa4.32□□□□□ -1.72
RNU6-17P-201ENST00000384245 PPP2R3AQ06190 1150 aa4.32□□□□□ -1.72
RNU6-17P-201ENST00000384245 AP3B2Q13367 1082 aa4.32□□□□□ -1.72
RNU6-17P-201ENST00000384245 NFKBIBQ15653 356 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms