RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 IFFO2Q5TF58 517 aa20.21■□□□□ 0.83
PDX1-201ENST00000381033 OTUD7BQ6GQQ9 843 aa20.21■□□□□ 0.83
PDX1-201ENST00000381033 TICAM2Q86XR7 235 aa20.21■□□□□ 0.83
PDX1-201ENST00000381033 CELF1Q92879 486 aaKnown RBP20.21■□□□□ 0.83
PDX1-201ENST00000381033 GNPATO15228 680 aa20.2■□□□□ 0.82
PDX1-201ENST00000381033 UQCRFS1P1P0C7P4 283 aa20.2■□□□□ 0.82
PDX1-201ENST00000381033 RXRAP19793 462 aa20.2■□□□□ 0.82
PDX1-201ENST00000381033 KRT85P78386 507 aa20.2■□□□□ 0.82
PDX1-201ENST00000381033 UBE3CQ15386 1083 aa20.2■□□□□ 0.82
PDX1-201ENST00000381033 FNBP4Q8N3X1 1017 aaPredicted RBP20.2■□□□□ 0.82
PDX1-201ENST00000381033 STRBPQ96SI9 672 aaKnown RBP20.2■□□□□ 0.82
PDX1-201ENST00000381033 ZNF652Q9Y2D9 606 aa20.2■□□□□ 0.82
PDX1-201ENST00000381033 FDPSP14324 419 aaKnown RBP20.2■□□□□ 0.82
PDX1-201ENST00000381033 LIG1P18858 919 aa20.2■□□□□ 0.82
PDX1-201ENST00000381033 CYB5R4Q7L1T6 521 aa20.2■□□□□ 0.82
PDX1-201ENST00000381033 MIGA1Q8NAN2 632 aa20.2■□□□□ 0.82
PDX1-201ENST00000381033 AIDAQ96BJ3 306 aa20.2■□□□□ 0.82
PDX1-201ENST00000381033 TACC3Q9Y6A5 838 aa20.2■□□□□ 0.82
PDX1-201ENST00000381033 MBD4O95243 580 aa20.19■□□□□ 0.82
PDX1-201ENST00000381033 RESTQ13127 1097 aa20.19■□□□□ 0.82
PDX1-201ENST00000381033 EPB41L4AQ9HCS5 686 aaPredicted RBP20.19■□□□□ 0.82
PDX1-201ENST00000381033 SYAP1Q96A49 352 aaPredicted RBP20.19■□□□□ 0.82
PDX1-201ENST00000381033 TSPY26PQ9H489 355 aa20.19■□□□□ 0.82
PDX1-201ENST00000381033 KLF18A0A0U1RQI7 1052 aa20.18■□□□□ 0.82
PDX1-201ENST00000381033 SMIM22K7EJ46 135 aa20.18■□□□□ 0.82
PDX1-201ENST00000381033 CAMK4Q16566 473 aa20.18■□□□□ 0.82
PDX1-201ENST00000381033 CCDC183Q5T5S1 534 aa20.18■□□□□ 0.82
PDX1-201ENST00000381033 ZSCAN25Q6NSZ9 544 aa20.18■□□□□ 0.82
PDX1-201ENST00000381033 NCOA7Q8NI08 942 aa20.18■□□□□ 0.82
PDX1-201ENST00000381033 HPS5Q9UPZ3 1129 aa20.18■□□□□ 0.82
PDX1-201ENST00000381033 B4E1Z4 1266 aa20.18■□□□□ 0.82
PDX1-201ENST00000381033 KDM4AO75164 1064 aa20.18■□□□□ 0.82
PDX1-201ENST00000381033 KLRK1P26718 216 aa20.18■□□□□ 0.82
PDX1-201ENST00000381033 MCM5P33992 734 aa20.18■□□□□ 0.82
PDX1-201ENST00000381033 CTDSPL2Q05D32 466 aa20.18■□□□□ 0.82
PDX1-201ENST00000381033 CLEC4GQ6UXB4 293 aa20.18■□□□□ 0.82
PDX1-201ENST00000381033 RALYLQ86SE5 291 aaKnown RBP20.18■□□□□ 0.82
PDX1-201ENST00000381033 ADGRA1Q86SQ6 560 aa20.18■□□□□ 0.82
PDX1-201ENST00000381033 PHF14O94880 888 aa20.17■□□□□ 0.82
PDX1-201ENST00000381033 LEO1Q8WVC0 666 aaPredicted RBP20.17■□□□□ 0.82
PDX1-201ENST00000381033 SPATA32Q96LK8 384 aa20.17■□□□□ 0.82
PDX1-201ENST00000381033 PPP1R9BQ96SB3 815 aa20.17■□□□□ 0.82
PDX1-201ENST00000381033 NEDD4P46934 1319 aa20.17■□□□□ 0.82
PDX1-201ENST00000381033 SALL1Q9NSC2 1324 aa20.17■□□□□ 0.82
PDX1-201ENST00000381033 LCORLQ8N3X6 602 aa20.17■□□□□ 0.82
PDX1-201ENST00000381033 TRIM44Q96DX7 344 aaPredicted RBP20.17■□□□□ 0.82
PDX1-201ENST00000381033 ZNF274Q96GC6 653 aaPredicted RBP20.17■□□□□ 0.82
PDX1-201ENST00000381033 ABCF2Q9UG63 623 aa20.17■□□□□ 0.82
PDX1-201ENST00000381033 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.17■□□□□ 0.82
PDX1-201ENST00000381033 IGSF3O75054 1194 aa20.16■□□□□ 0.82
PDX1-201ENST00000381033 PGBD1Q96JS3 809 aa20.16■□□□□ 0.82
PDX1-201ENST00000381033 CCNL1Q9UK58 526 aaPredicted RBP20.16■□□□□ 0.82
PDX1-201ENST00000381033 GOLGA8BA8MQT2 603 aa20.16■□□□□ 0.82
PDX1-201ENST00000381033 CCDC173Q0VFZ6 552 aa20.16■□□□□ 0.82
PDX1-201ENST00000381033 MAP3K12Q12852 859 aa20.16■□□□□ 0.82
PDX1-201ENST00000381033 ANKRD18AQ8IVF6 992 aa20.16■□□□□ 0.82
PDX1-201ENST00000381033 CCDC144CPQ8IYA2 1237 aa20.16■□□□□ 0.82
PDX1-201ENST00000381033 SMAP1Q8IYB5 467 aaPredicted RBP20.15■□□□□ 0.82
PDX1-201ENST00000381033 IFNL3Q8IZI9 196 aa20.15■□□□□ 0.82
PDX1-201ENST00000381033 LLPHQ9BRT6 129 aaKnown RBP20.15■□□□□ 0.82
PDX1-201ENST00000381033 LRP2BPQ9P2M1 347 aa20.15■□□□□ 0.82
PDX1-201ENST00000381033 MINPP1Q9UNW1 487 aa20.15■□□□□ 0.82
PDX1-201ENST00000381033 CDC5LQ99459 802 aaKnown RBP20.15■□□□□ 0.82
PDX1-201ENST00000381033 ADD1P35611 737 aaKnown RBP20.14■□□□□ 0.82
PDX1-201ENST00000381033 ANP32BQ92688 251 aaKnown RBP20.14■□□□□ 0.82
PDX1-201ENST00000381033 ARHGEF1Q92888 912 aaKnown RBP20.14■□□□□ 0.82
PDX1-201ENST00000381033 MYL10Q9BUA6 226 aa20.14■□□□□ 0.82
PDX1-201ENST00000381033 BCORQ6W2J9 1755 aa20.14■□□□□ 0.81
PDX1-201ENST00000381033 ATRNO75882 1429 aa20.14■□□□□ 0.81
PDX1-201ENST00000381033 CNTNAP4Q9C0A0 1308 aa20.14■□□□□ 0.81
PDX1-201ENST00000381033 CARMIL3Q8ND23 1372 aa20.14■□□□□ 0.81
PDX1-201ENST00000381033 GSG1L2A8MUP6 293 aa20.14■□□□□ 0.81
PDX1-201ENST00000381033 ILDR1Q86SU0 546 aaPredicted RBP20.14■□□□□ 0.81
PDX1-201ENST00000381033 MPNDQ8N594 471 aa20.14■□□□□ 0.81
PDX1-201ENST00000381033 ZHX1Q9UKY1 873 aaPredicted RBP20.14■□□□□ 0.81
PDX1-201ENST00000381033 ARAP2Q8WZ64 1704 aa20.14■□□□□ 0.81
PDX1-201ENST00000381033 BTAF1O14981 1849 aa20.13■□□□□ 0.81
PDX1-201ENST00000381033 EVCP57679 992 aa20.13■□□□□ 0.81
PDX1-201ENST00000381033 SF3B3Q15393 1217 aaKnown RBP20.13■□□□□ 0.81
PDX1-201ENST00000381033 AIFM3Q96NN9 605 aa20.13■□□□□ 0.81
PDX1-201ENST00000381033 NARFQ9UHQ1 456 aa20.13■□□□□ 0.81
PDX1-201ENST00000381033 RTL9Q8NET4 1388 aa20.13■□□□□ 0.81
PDX1-201ENST00000381033 ESPNB1AK53 854 aa20.13■□□□□ 0.81
PDX1-201ENST00000381033 UBE2Q2LH0YL09 131 aa20.13■□□□□ 0.81
PDX1-201ENST00000381033 RPS6KA4O75676 772 aa20.13■□□□□ 0.81
PDX1-201ENST00000381033 NBPF5PQ86XG9 351 aaPredicted RBP20.13■□□□□ 0.81
PDX1-201ENST00000381033 SDR42E1Q8WUS8 393 aa20.13■□□□□ 0.81
PDX1-201ENST00000381033 SETDB2Q96T68 719 aa20.13■□□□□ 0.81
PDX1-201ENST00000381033 DACT1Q9NYF0 836 aa20.13■□□□□ 0.81
PDX1-201ENST00000381033 JAG2Q9Y219 1238 aa20.13■□□□□ 0.81
PDX1-201ENST00000381033 COL1A1P02452 1464 aaPredicted RBP20.13■□□□□ 0.81
PDX1-201ENST00000381033 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.12■□□□□ 0.81
PDX1-201ENST00000381033 ZKSCAN3Q9BRR0 538 aa20.12■□□□□ 0.81
PDX1-201ENST00000381033 CICQ96RK0 1608 aaPredicted RBP20.12■□□□□ 0.81
PDX1-201ENST00000381033 PATL2C9JE40 543 aaKnown RBP20.12■□□□□ 0.81
PDX1-201ENST00000381033 ZPR1O75312 459 aa20.12■□□□□ 0.81
PDX1-201ENST00000381033 TRDNQ13061 729 aa20.12■□□□□ 0.81
PDX1-201ENST00000381033 CSPP1Q1MSJ5 1256 aa20.12■□□□□ 0.81
PDX1-201ENST00000381033 CKAP2LQ8IYA6 745 aa20.12■□□□□ 0.81
PDX1-201ENST00000381033 NAPBQ9H115 298 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms