RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 CALR3Q96L12 384 aaKnown RBP5.36□□□□□ -1.55
PTCD2-202ENST00000380639 OLR1P78380 273 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 STIM1Q13586 685 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 CUL4BQ13620 913 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 FAN1Q9Y2M0 1017 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 BTN3A2P78410 334 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 STX3Q13277 289 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 SF3B3Q15393 1217 aaKnown RBP5.36□□□□□ -1.55
PTCD2-202ENST00000380639 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTCD2-202ENST00000380639 CCDC25Q86WR0 208 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 SRRM1Q8IYB3 904 aaKnown RBP5.36□□□□□ -1.55
PTCD2-202ENST00000380639 CTNNA3Q9UI47 895 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 CAVIN2O95810 425 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 SERPINB6P35237 376 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 POLE2P56282 527 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 PSMC1P62191 440 aaKnown RBP5.36□□□□□ -1.55
PTCD2-202ENST00000380639 DAB2P98082 770 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 AMOTL1Q8IY63 956 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 SPAG16Q8N0X2 631 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 VPS18Q9P253 973 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 TXNDC16Q9P2K2 825 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 MID2Q9UJV3 735 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 IPO8O15397 1037 aaKnown RBP5.36□□□□□ -1.55
PTCD2-202ENST00000380639 UBE3AQ05086 875 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 WDR60Q8WVS4 1066 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 CTNNA2P26232 953 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 INPP5BP32019 993 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 NRG3P56975 720 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 CKAP4Q07065 602 aaKnown RBP5.36□□□□□ -1.55
PTCD2-202ENST00000380639 LSM14AQ8ND56 463 aaKnown RBP5.36□□□□□ -1.55
PTCD2-202ENST00000380639 TBC1D22AQ8WUA7 517 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 METTL14Q9HCE5 456 aaKnown RBP5.36□□□□□ -1.55
PTCD2-202ENST00000380639 TIMMDC1Q9NPL8 285 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 WBP11Q9Y2W2 641 aaKnown RBP5.36□□□□□ -1.55
PTCD2-202ENST00000380639 KIF7Q2M1P5 1343 aa5.36□□□□□ -1.55
PTCD2-202ENST00000380639 YWHAEP62258 255 aaKnown RBP5.35□□□□□ -1.55
PTCD2-202ENST00000380639 SPA17Q15506 151 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 ZCWPW1Q9H0M4 648 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 BRMS1Q9HCU9 246 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 PARVAQ9NVD7 372 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 H0Y626 953 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 SMAPO00193 183 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 TRIM16O95361 564 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 KRT20P35900 424 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 ITGB3BPQ13352 177 aaPredicted RBP5.35□□□□□ -1.55
PTCD2-202ENST00000380639 LAMC2Q13753 1193 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 GEN1Q17RS7 908 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 CHCHD4Q8N4Q1 142 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTCD2-202ENST00000380639 SLC24A3Q9HC58 644 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 TRPC5Q9UL62 973 aaPredicted RBP5.35□□□□□ -1.55
PTCD2-202ENST00000380639 CRCPO75575 148 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 DDX58O95786 925 aaKnown RBP5.35□□□□□ -1.55
PTCD2-202ENST00000380639 EEF2P13639 858 aaKnown RBP5.35□□□□□ -1.55
PTCD2-202ENST00000380639 MTA3Q9BTC8 594 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 VEZTQ9HBM0 779 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 DNAJC17Q9NVM6 304 aaKnown RBP5.35□□□□□ -1.55
PTCD2-202ENST00000380639 KRT18P05783 430 aaKnown RBP5.35□□□□□ -1.55
PTCD2-202ENST00000380639 CASTP20810 708 aaKnown RBP5.35□□□□□ -1.55
PTCD2-202ENST00000380639 ALDH3A1P30838 453 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 SNRNP27Q8WVK2 155 aaKnown RBP5.35□□□□□ -1.55
PTCD2-202ENST00000380639 ZWILCHQ9H900 591 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 TOP1P11387 765 aaKnown RBP5.35□□□□□ -1.55
PTCD2-202ENST00000380639 LMNB1P20700 586 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 CDH24Q86UP0 819 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 CCHCR1Q8TD31 782 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 PTPDC1A2A3K4 754 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 BAG3O95817 575 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 BCAP31P51572 246 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 GOLGA8AA7E2F4 631 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 EIF2S3LQ2VIR3 472 aaKnown RBP5.35□□□□□ -1.55
PTCD2-202ENST00000380639 DPF1Q92782 380 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 SAMSN1Q9NSI8 373 aaKnown RBP5.35□□□□□ -1.55
PTCD2-202ENST00000380639 RIPOR2Q9Y4F9 1068 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 ORC6Q9Y5N6 252 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 ARF3P61204 181 aaPredicted RBP5.35□□□□□ -1.55
PTCD2-202ENST00000380639 ARF1P84077 181 aaKnown RBP5.35□□□□□ -1.55
PTCD2-202ENST00000380639 BFSP1Q12934 665 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 SNX1Q13596 522 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 KIAA0753Q2KHM9 967 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 TRAK1Q9UPV9 953 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 NFXL1Q6ZNB6 911 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 ZNF397Q8NF99 534 aaPredicted RBP5.35□□□□□ -1.55
PTCD2-202ENST00000380639 SMAD5Q99717 465 aaKnown RBP5.35□□□□□ -1.55
PTCD2-202ENST00000380639 TXLNGQ9NUQ3 528 aa5.35□□□□□ -1.55
PTCD2-202ENST00000380639 ASPHQ12797 758 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 HIF1AQ16665 826 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 CWC27Q6UX04 472 aaKnown RBP5.34□□□□□ -1.55
PTCD2-202ENST00000380639 ZNF574Q6ZN55 896 aaPredicted RBP5.34□□□□□ -1.55
PTCD2-202ENST00000380639 ANKRD13AQ8IZ07 590 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 SCG3Q8WXD2 468 aaKnown RBP5.34□□□□□ -1.55
PTCD2-202ENST00000380639 NLRP4Q96MN2 994 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 HOMER3Q9NSC5 361 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 PPP4R3AQ6IN85 833 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 ANO2Q9NQ90 1003 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 TFIP11Q9UBB9 837 aaKnown RBP5.34□□□□□ -1.55
PTCD2-202ENST00000380639 DDHD2O94830 711 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 PDE6AP16499 860 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 DNA2P51530 1060 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 SNX16P57768 344 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms