RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 ERBB4Q15303 1308 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 PRPF40AO75400 957 aaKnown RBP7.59□□□□□ -1.2
NEDD9-202ENST00000379446 PSMA5P28066 241 aa7.59□□□□□ -1.2
NEDD9-202ENST00000379446 BIRC2Q13490 618 aa7.59□□□□□ -1.2
NEDD9-202ENST00000379446 TBC1D9BQ66K14 1250 aa7.59□□□□□ -1.2
NEDD9-202ENST00000379446 DRC7Q8IY82 874 aa7.59□□□□□ -1.2
NEDD9-202ENST00000379446 PHAXQ9H814 394 aaKnown RBP7.59□□□□□ -1.2
NEDD9-202ENST00000379446 ATG3Q9NT62 314 aa7.59□□□□□ -1.2
NEDD9-202ENST00000379446 MAP3K15Q6ZN16 1313 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 ANKARQ7Z5J8 1434 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 PTMSP20962 102 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 STK3Q13188 491 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 MFSD6Q6ZSS7 791 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 SAMD7Q7Z3H4 446 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 OTUD7AQ8TE49 926 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-202ENST00000379446 TGFBRAP1Q8WUH2 860 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 UBA5Q9GZZ9 404 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 CGNQ9P2M7 1197 aaKnown RBP7.58□□□□□ -1.2
NEDD9-202ENST00000379446 TECPR2O15040 1411 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 TET3O43151 1660 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 ZBTB7BO15156 539 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-202ENST00000379446 KCNQ3O43525 872 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 OFD1O75665 1012 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 ALAS1P13196 640 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 NEK4P51957 841 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 CFAP100Q494V2 611 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 CCL15-CCL14A0A0B4J2E2 113 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 SPDYE3A6NKU9 549 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 KBTBD13C9JR72 458 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 TOMM70O94826 608 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 PUM3Q15397 648 aaKnown RBP7.58□□□□□ -1.2
NEDD9-202ENST00000379446 CCL15Q16663 113 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 GLG1Q92896 1179 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 PPP2R3CQ969Q6 453 aa7.58□□□□□ -1.2
NEDD9-202ENST00000379446 EDC4Q6P2E9 1401 aaKnown RBP7.58□□□□□ -1.2
NEDD9-202ENST00000379446 CYP27B1O15528 508 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 CYP2B6P20813 491 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 SLC1A4P43007 532 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 GRAPQ13588 217 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 RABEP1Q15276 862 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 GRAPLQ8TC17 118 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-202ENST00000379446 TRIM6Q9C030 488 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-202ENST00000379446 GPCPD1Q9NPB8 672 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 CLASP1Q7Z460 1538 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 IQGAP1P46940 1657 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 C1QTNF8P60827 252 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 RAD50Q92878 1312 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 RNF17Q9BXT8 1623 aaKnown RBP7.57□□□□□ -1.2
NEDD9-202ENST00000379446 TMEM88BA6NKF7 163 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 CTCFP49711 727 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-202ENST00000379446 CACNB3P54284 484 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 EEPD1Q7L9B9 569 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 BICD1Q96G01 975 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 MEIS3Q99687 375 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 RNF208Q9H0X6 261 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 AZI2Q9H6S1 392 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 MLXIPQ9HAP2 919 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 CARMIL3Q8ND23 1372 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 CD2BP2O95400 341 aaKnown RBP7.57□□□□□ -1.2
NEDD9-202ENST00000379446 ATN1P54259 1190 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-202ENST00000379446 CCDC173Q0VFZ6 552 aa7.57□□□□□ -1.2
NEDD9-202ENST00000379446 GIGYF2Q6Y7W6 1299 aaKnown RBP7.57□□□□□ -1.2
NEDD9-202ENST00000379446 CCDC97Q96F63 343 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-202ENST00000379446 FAM193BQ96PV7 902 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-202ENST00000379446 GTPBP6O43824 516 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-202ENST00000379446 SORBS3O60504 671 aa7.56□□□□□ -1.2
NEDD9-202ENST00000379446 CALML3P27482 149 aa7.56□□□□□ -1.2
NEDD9-202ENST00000379446 NUCB2P80303 420 aa7.56□□□□□ -1.2
NEDD9-202ENST00000379446 HTATIP2Q9BUP3 242 aa7.56□□□□□ -1.2
NEDD9-202ENST00000379446 PA2G4Q9UQ80 394 aaKnown RBP7.56□□□□□ -1.2
NEDD9-202ENST00000379446 PLSCR1O15162 318 aa7.56□□□□□ -1.2
NEDD9-202ENST00000379446 ALDH1L1O75891 902 aa7.56□□□□□ -1.2
NEDD9-202ENST00000379446 KCNJ6P48051 423 aa7.56□□□□□ -1.2
NEDD9-202ENST00000379446 TPM4P67936 248 aa7.56□□□□□ -1.2
NEDD9-202ENST00000379446 NOGQ13253 232 aa7.56□□□□□ -1.2
NEDD9-202ENST00000379446 MAP7D2Q96T17 732 aa7.56□□□□□ -1.2
NEDD9-202ENST00000379446 TDRD3Q9H7E2 651 aaKnown RBP7.56□□□□□ -1.2
NEDD9-202ENST00000379446 GOPCQ9HD26 462 aa7.56□□□□□ -1.2
NEDD9-202ENST00000379446 LEMD3Q9Y2U8 911 aa7.56□□□□□ -1.2
NEDD9-202ENST00000379446 U3KPZ7 1027 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-202ENST00000379446 DIP2BQ9P265 1576 aa7.56□□□□□ -1.2
NEDD9-202ENST00000379446 SHROOM2Q13796 1616 aa7.56□□□□□ -1.2
NEDD9-202ENST00000379446 TIMM10P62072 90 aa7.56□□□□□ -1.2
NEDD9-202ENST00000379446 TSR1Q2NL82 804 aaKnown RBP7.56□□□□□ -1.2
NEDD9-202ENST00000379446 GAS2L3Q86XJ1 694 aa7.56□□□□□ -1.2
NEDD9-202ENST00000379446 METTL22Q9BUU2 404 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-202ENST00000379446 GLIS2Q9BZE0 524 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-202ENST00000379446 SEC31BQ9NQW1 1179 aa7.56□□□□□ -1.2
NEDD9-202ENST00000379446 ADARB2Q9NS39 739 aaKnown RBP7.56□□□□□ -1.2
NEDD9-202ENST00000379446 CCDC194A0A1B0GVG4 234 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 KIF20AO95235 890 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 BAG4O95429 457 aaKnown RBP7.55□□□□□ -1.2
NEDD9-202ENST00000379446 FAM117BQ6P1L5 589 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 KCNG4Q8TDN1 519 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 PUS7Q96PZ0 661 aaKnown RBP7.55□□□□□ -1.2
NEDD9-202ENST00000379446 NOL7Q9UMY1 257 aaKnown RBP7.55□□□□□ -1.2
NEDD9-202ENST00000379446 COL15A1P39059 1388 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 KIF1BO60333 1816 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 CTSWP56202 376 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 CLEC4GQ6UXB4 293 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms