RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 CTR9Q6PD62 1173 aa9.59□□□□□ -0.87
VPS36-201ENST00000378060 DHX32Q7L7V1 743 aaKnown RBP9.59□□□□□ -0.87
VPS36-201ENST00000378060 CALML4Q96GE6 196 aa9.59□□□□□ -0.87
VPS36-201ENST00000378060 ZBTB3Q9H5J0 574 aa9.59□□□□□ -0.87
VPS36-201ENST00000378060 ABCC6O95255 1503 aa9.59□□□□□ -0.87
VPS36-201ENST00000378060 CTAGE15A4D2H0 777 aa9.59□□□□□ -0.87
VPS36-201ENST00000378060 CTAGE8P0CG41 777 aa9.59□□□□□ -0.87
VPS36-201ENST00000378060 CYLC1P35663 651 aaPredicted RBP9.59□□□□□ -0.87
VPS36-201ENST00000378060 LMAN1P49257 510 aa9.59□□□□□ -0.87
VPS36-201ENST00000378060 CTAGE6Q86UF2 777 aa9.59□□□□□ -0.87
VPS36-201ENST00000378060 CTAGE4Q8IX94 777 aa9.59□□□□□ -0.87
VPS36-201ENST00000378060 FNBP4Q8N3X1 1017 aaPredicted RBP9.59□□□□□ -0.87
VPS36-201ENST00000378060 CEP112Q8N8E3 955 aa9.59□□□□□ -0.87
VPS36-201ENST00000378060 CARD10Q9BWT7 1032 aa9.59□□□□□ -0.87
VPS36-201ENST00000378060 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.59□□□□□ -0.871e-6■■■■■ 133.2
VPS36-201ENST00000378060 IVLP07476 585 aa9.59□□□□□ -0.87
VPS36-201ENST00000378060 INCENPQ9NQS7 918 aa9.59□□□□□ -0.87
VPS36-201ENST00000378060 CYP27B1O15528 508 aa9.59□□□□□ -0.87
VPS36-201ENST00000378060 POTEJP0CG39 1038 aa9.59□□□□□ -0.87
VPS36-201ENST00000378060 PTGS1P23219 599 aa9.59□□□□□ -0.87
VPS36-201ENST00000378060 WTAPQ15007 396 aa9.59□□□□□ -0.87
VPS36-201ENST00000378060 NCAPD2Q15021 1401 aa9.59□□□□□ -0.88
VPS36-201ENST00000378060 SPATA31A5Q5VU36 1347 aa9.58□□□□□ -0.88
VPS36-201ENST00000378060 SPATA31A7Q8IWB4 1347 aa9.58□□□□□ -0.88
VPS36-201ENST00000378060 GLI3P10071 1580 aa9.58□□□□□ -0.88
VPS36-201ENST00000378060 CCDC175P0C221 793 aa9.58□□□□□ -0.88
VPS36-201ENST00000378060 IL2RBP14784 551 aa9.58□□□□□ -0.88
VPS36-201ENST00000378060 ISM2Q6H9L7 571 aa9.58□□□□□ -0.88
VPS36-201ENST00000378060 COPS6Q7L5N1 327 aa9.58□□□□□ -0.88
VPS36-201ENST00000378060 DZIP1Q86YF9 867 aaKnown RBP9.58□□□□□ -0.88
VPS36-201ENST00000378060 XAGE3Q8WTP9 111 aa9.58□□□□□ -0.88
VPS36-201ENST00000378060 PODXL2Q9NZ53 605 aa9.58□□□□□ -0.88
VPS36-201ENST00000378060 WNK3Q9BYP7 1800 aa9.58□□□□□ -0.88
VPS36-201ENST00000378060 LDHCP07864 332 aa9.58□□□□□ -0.88
VPS36-201ENST00000378060 EZRP15311 586 aaKnown RBP9.58□□□□□ -0.88
VPS36-201ENST00000378060 PDE4BQ07343 736 aa9.58□□□□□ -0.88
VPS36-201ENST00000378060 IFFO1Q0D2I5 559 aa9.58□□□□□ -0.88
VPS36-201ENST00000378060 OGFRQ9NZT2 677 aa9.58□□□□□ -0.88
VPS36-201ENST00000378060 RGS17Q9UGC6 210 aaPredicted RBP9.58□□□□□ -0.88
VPS36-201ENST00000378060 CDC5LQ99459 802 aaKnown RBP9.58□□□□□ -0.88
VPS36-201ENST00000378060 QTRT2Q9H974 415 aaKnown RBP9.58□□□□□ -0.88
VPS36-201ENST00000378060 HOXB7P09629 217 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 LMOD1P29536 600 aaPredicted RBP9.57□□□□□ -0.88
VPS36-201ENST00000378060 GBP2P32456 591 aaPredicted RBP9.57□□□□□ -0.88
VPS36-201ENST00000378060 LMBR1LQ6UX01 489 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 SLF2Q8IX21 1173 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 DYDC1Q8WWB3 177 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 LRRC2Q9BYS8 371 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 AKR1B10O60218 316 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 TMEM132AQ24JP5 1023 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 SPECC1Q5M775 1068 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 SMAP1Q8IYB5 467 aaPredicted RBP9.57□□□□□ -0.88
VPS36-201ENST00000378060 GIMAP7Q8NHV1 300 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 TAOK3Q9H2K8 898 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 LMBRD1Q9NUN5 540 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 PARP4Q9UKK3 1724 aaKnown RBP9.57□□□□□ -0.88
VPS36-201ENST00000378060 CHL1O00533 1208 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 IFI16Q16666 785 aaKnown RBP9.57□□□□□ -0.88
VPS36-201ENST00000378060 ATP2B3Q16720 1220 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 RTN1Q16799 776 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 ESR2Q92731 530 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 GOLGA1Q92805 767 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 JADE2Q9NQC1 790 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 PAG1Q9NWQ8 432 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 OVOS2A0A0G2JMS6 1433 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 GCOM1H8Y6P7 765 aaPredicted RBP9.57□□□□□ -0.88
VPS36-201ENST00000378060 PRC1O43663 620 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 MYZAPP0CAP1 466 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 MAP2K1Q02750 393 aaPredicted RBP9.57□□□□□ -0.88
VPS36-201ENST00000378060 FAM160A1Q05DH4 1040 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 HLTFQ14527 1009 aaKnown RBP eCLIP9.57□□□□□ -0.88
VPS36-201ENST00000378060 CCDC178Q5BJE1 867 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 WWC2Q6AWC2 1192 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 ERO1AQ96HE7 468 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 TRIM47Q96LD4 638 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 LLPHQ9BRT6 129 aaKnown RBP9.57□□□□□ -0.88
VPS36-201ENST00000378060 MAP3K5Q99683 1374 aa9.57□□□□□ -0.88
VPS36-201ENST00000378060 TRIM75PA6NK02 468 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 IDEP14735 1019 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 TRIM21P19474 475 aaKnown RBP9.56□□□□□ -0.88
VPS36-201ENST00000378060 GNAQP50148 359 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 ZSCAN29Q8IWY8 852 aaPredicted RBP9.56□□□□□ -0.88
VPS36-201ENST00000378060 IL17REQ8NFR9 667 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 ZSWIM4Q9H7M6 989 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 LRRC37A3O60309 1634 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 PTPDC1A2A3K4 754 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 PSMA7O14818 248 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 SGSM2O43147 1006 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 CETN1Q12798 172 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 KRT24Q2M2I5 525 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 CCDC40Q4G0X9 1142 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 CCDC144CPQ8IYA2 1237 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 PKD1L3Q7Z443 1732 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 CTAGE9A4FU28 777 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 SMC1AQ14683 1233 aaKnown RBP9.56□□□□□ -0.88
VPS36-201ENST00000378060 TNIP1Q15025 636 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 VPS72Q15906 364 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 MYRIPQ8NFW9 859 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 ZNF521Q96K83 1311 aa9.56□□□□□ -0.88
VPS36-201ENST00000378060 TSPY2A6NKD2 308 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms