RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 PDE8BO95263 885 aa21.96■■□□□ 1.11
HLA-A-201ENST00000376802 CRKP46108 304 aa21.96■■□□□ 1.11
HLA-A-201ENST00000376802 IREB2P48200 963 aaKnown RBP21.96■■□□□ 1.11
HLA-A-201ENST00000376802 CDAN1Q8IWY9 1227 aa21.96■■□□□ 1.11
HLA-A-201ENST00000376802 HTTP42858 3142 aa21.96■■□□□ 1.11
HLA-A-201ENST00000376802 SLFN5Q08AF3 891 aa21.95■■□□□ 1.1
HLA-A-201ENST00000376802 TNFAIP1Q13829 316 aa21.95■■□□□ 1.1
HLA-A-201ENST00000376802 METTL24Q5JXM2 366 aa21.95■■□□□ 1.1
HLA-A-201ENST00000376802 FBXO46Q6PJ61 603 aaPredicted RBP21.95■■□□□ 1.1
HLA-A-201ENST00000376802 ANKRD13AQ8IZ07 590 aa21.95■■□□□ 1.1
HLA-A-201ENST00000376802 E9PSI1 815 aa21.94■■□□□ 1.1
HLA-A-201ENST00000376802 BCAMP50895 628 aa21.94■■□□□ 1.1
HLA-A-201ENST00000376802 SLC34A2O95436 690 aa21.93■■□□□ 1.1
HLA-A-201ENST00000376802 VPS37DQ86XT2 251 aa21.93■■□□□ 1.1
HLA-A-201ENST00000376802 PTPN18Q99952 460 aa21.93■■□□□ 1.1
HLA-A-201ENST00000376802 TMEM39BQ9GZU3 492 aa21.93■■□□□ 1.1
HLA-A-201ENST00000376802 TESPA1A2RU30 521 aaPredicted RBP21.92■■□□□ 1.1
HLA-A-201ENST00000376802 TCP10L2B9ZVM9 353 aa21.92■■□□□ 1.1
HLA-A-201ENST00000376802 FGFR2P21802 821 aa21.92■■□□□ 1.1
HLA-A-201ENST00000376802 RFX5P48382 616 aaPredicted RBP21.92■■□□□ 1.1
HLA-A-201ENST00000376802 HDLBPQ00341 1268 aaKnown RBP21.92■■□□□ 1.1
HLA-A-201ENST00000376802 CHAF1AQ13111 956 aaPredicted RBP21.92■■□□□ 1.1
HLA-A-201ENST00000376802 CAVIN4Q5BKX8 364 aa21.92■■□□□ 1.1
HLA-A-201ENST00000376802 MYH13Q9UKX3 1938 aa21.91■■□□□ 1.1
HLA-A-201ENST00000376802 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.91■■□□□ 1.1
HLA-A-201ENST00000376802 TBC1D22AQ8WUA7 517 aa21.91■■□□□ 1.1
HLA-A-201ENST00000376802 CDCA7LQ96GN5 454 aa21.91■■□□□ 1.1
HLA-A-201ENST00000376802 CENPFP49454 3210 aa21.9■■□□□ 1.1
HLA-A-201ENST00000376802 OPTNQ96CV9 577 aa21.9■■□□□ 1.1
HLA-A-201ENST00000376802 MS4A4AQ96JQ5 239 aa21.9■■□□□ 1.1
HLA-A-201ENST00000376802 ELP3Q9H9T3 547 aa21.9■■□□□ 1.1
HLA-A-201ENST00000376802 CRHR2Q13324 411 aa21.89■■□□□ 1.1
HLA-A-201ENST00000376802 ALDH1L2Q3SY69 923 aa21.89■■□□□ 1.1
HLA-A-201ENST00000376802 TRMT2AQ8IZ69 625 aaKnown RBP21.89■■□□□ 1.1
HLA-A-201ENST00000376802 CNKSR2Q8WXI2 1034 aa21.89■■□□□ 1.1
HLA-A-201ENST00000376802 MRIQ9BWK5 157 aa21.89■■□□□ 1.1
HLA-A-201ENST00000376802 KIF16BQ96L93 1317 aa21.89■■□□□ 1.09
HLA-A-201ENST00000376802 FRAT2O75474 233 aaPredicted RBP21.88■■□□□ 1.09
HLA-A-201ENST00000376802 CACNB3P54284 484 aa21.88■■□□□ 1.09
HLA-A-201ENST00000376802 PUM3Q15397 648 aaKnown RBP21.88■■□□□ 1.09
HLA-A-201ENST00000376802 OTOP1Q7RTM1 612 aa21.88■■□□□ 1.09
HLA-A-201ENST00000376802 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.88■■□□□ 1.092e-15■■□□□ 14.3
HLA-A-201ENST00000376802 TEKT1Q969V4 418 aa21.88■■□□□ 1.09
HLA-A-201ENST00000376802 ZDHHC15Q96MV8 337 aa21.88■■□□□ 1.09
HLA-A-201ENST00000376802 EYA2O00167 538 aa21.87■■□□□ 1.09
HLA-A-201ENST00000376802 TNNI2P48788 182 aa21.87■■□□□ 1.09
HLA-A-201ENST00000376802 VGLL4Q14135 290 aa21.87■■□□□ 1.09
HLA-A-201ENST00000376802 APOBEC3HQ6NTF7 200 aaKnown RBP21.87■■□□□ 1.09
HLA-A-201ENST00000376802 ATG9AQ7Z3C6 839 aa21.87■■□□□ 1.09
HLA-A-201ENST00000376802 TRIM17Q9Y577 477 aa21.87■■□□□ 1.09
HLA-A-201ENST00000376802 IFIT1P09914 478 aaKnown RBP21.86■■□□□ 1.09
HLA-A-201ENST00000376802 MAP3K9P80192 1104 aa21.86■■□□□ 1.09
HLA-A-201ENST00000376802 CAP1Q01518 475 aa21.86■■□□□ 1.09
HLA-A-201ENST00000376802 OTUD7BQ6GQQ9 843 aa21.86■■□□□ 1.09
HLA-A-201ENST00000376802 BRI3BPQ8WY22 251 aa21.85■■□□□ 1.09
HLA-A-201ENST00000376802 SUGT1Q9Y2Z0 365 aa21.85■■□□□ 1.09
HLA-A-201ENST00000376802 HHIPL2Q6UWX4 724 aa21.84■■□□□ 1.09
HLA-A-201ENST00000376802 CD99L2Q8TCZ2 262 aa21.84■■□□□ 1.09
HLA-A-201ENST00000376802 SMC4Q9NTJ3 1288 aa21.84■■□□□ 1.09
HLA-A-201ENST00000376802 FKBP1CQ5VVH2 108 aa21.83■■□□□ 1.09
HLA-A-201ENST00000376802 FAM83AQ86UY5 434 aa21.83■■□□□ 1.09
HLA-A-201ENST00000376802 LPIN2Q92539 896 aa21.83■■□□□ 1.09
HLA-A-201ENST00000376802 ERO1AQ96HE7 468 aa21.83■■□□□ 1.09
HLA-A-201ENST00000376802 PTPN22Q9Y2R2 807 aa21.83■■□□□ 1.09
HLA-A-201ENST00000376802 MAST3O60307 1309 aa21.82■■□□□ 1.08
HLA-A-201ENST00000376802 SP3Q02447 781 aa21.82■■□□□ 1.08
HLA-A-201ENST00000376802 CSADQ9Y600 493 aa21.82■■□□□ 1.08
HLA-A-201ENST00000376802 SNCAIPQ9Y6H5 919 aa21.82■■□□□ 1.08
HLA-A-201ENST00000376802 MKI67P46013 3256 aaKnown RBP21.82■■□□□ 1.08
HLA-A-201ENST00000376802 CCL15-CCL14A0A0B4J2E2 113 aa21.81■■□□□ 1.08
HLA-A-201ENST00000376802 SLC5A1P13866 664 aa21.81■■□□□ 1.08
HLA-A-201ENST00000376802 GTF2A2P52657 109 aa21.81■■□□□ 1.08
HLA-A-201ENST00000376802 CCL15Q16663 113 aa21.81■■□□□ 1.08
HLA-A-201ENST00000376802 FAM43AQ8N2R8 423 aa21.81■■□□□ 1.08
HLA-A-201ENST00000376802 OTUD5Q96G74 571 aa21.81■■□□□ 1.08
HLA-A-201ENST00000376802 KIAA0100Q14667 2235 aaKnown RBP21.81■■□□□ 1.08
HLA-A-201ENST00000376802 BRCA2P51587 3418 aa21.81■■□□□ 1.08
HLA-A-201ENST00000376802 RBBP6Q7Z6E9 1792 aaKnown RBP21.81■■□□□ 1.08
HLA-A-201ENST00000376802 SPDYE5A6NIY4 337 aa21.8■■□□□ 1.08
HLA-A-201ENST00000376802 WDR66Q8TBY9 1149 aa21.8■■□□□ 1.08
HLA-A-201ENST00000376802 ZKSCAN4Q969J2 545 aaPredicted RBP21.8■■□□□ 1.08
HLA-A-201ENST00000376802 NOB1Q9ULX3 412 aaKnown RBP21.8■■□□□ 1.08
HLA-A-201ENST00000376802 CIAO1O76071 339 aa21.8■■□□□ 1.08
HLA-A-201ENST00000376802 UBTFL1P0CB47 393 aaPredicted RBP21.8■■□□□ 1.08
HLA-A-201ENST00000376802 SIL1Q9H173 461 aa21.8■■□□□ 1.08
HLA-A-201ENST00000376802 TMOD2Q9NZR1 351 aa21.8■■□□□ 1.08
HLA-A-201ENST00000376802 FBXO3Q9UK99 471 aa21.8■■□□□ 1.08
HLA-A-201ENST00000376802 AK9Q5TCS8 1911 aa21.79■■□□□ 1.08
HLA-A-201ENST00000376802 PRPF38BQ5VTL8 546 aaKnown RBP21.79■■□□□ 1.08
HLA-A-201ENST00000376802 WRNIP1Q96S55 665 aa21.79■■□□□ 1.08
HLA-A-201ENST00000376802 EFCC1Q9HA90 598 aa21.79■■□□□ 1.08
HLA-A-201ENST00000376802 RPAP1Q9BWH6 1393 aaPredicted RBP21.78■■□□□ 1.08
HLA-A-201ENST00000376802 POTEFA5A3E0 1075 aa21.78■■□□□ 1.08
HLA-A-201ENST00000376802 CT47B1P0C2W7 299 aaPredicted RBP21.78■■□□□ 1.08
HLA-A-201ENST00000376802 PRDX5P30044 214 aa21.78■■□□□ 1.08
HLA-A-201ENST00000376802 TAF1CQ15572 869 aaPredicted RBP21.78■■□□□ 1.08
HLA-A-201ENST00000376802 DIXDC1Q155Q3 683 aa21.78■■□□□ 1.08
HLA-A-201ENST00000376802 ERO1BQ86YB8 467 aa21.78■■□□□ 1.08
HLA-A-201ENST00000376802 DAGLAQ9Y4D2 1042 aa21.78■■□□□ 1.08
HLA-A-201ENST00000376802 LRRFIP2Q9Y608 721 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms