RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 CHRAC1Q9NRG0 131 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 DISC1Q9NRI5 854 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 CCDC93Q567U6 631 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 NBPF5PQ86XG9 351 aaPredicted RBP6.66□□□□□ -1.34
SCN2A-202ENST00000375427 MGARPQ8TDB4 240 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 BIN2Q9UBW5 565 aaPredicted RBP6.66□□□□□ -1.34
SCN2A-202ENST00000375427 MSH2P43246 934 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 DONSONQ9NYP3 566 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 BIRC2Q13490 618 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 ZNF280BQ86YH2 543 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 GEMIN8Q9NWZ8 242 aaKnown RBP6.66□□□□□ -1.34
SCN2A-202ENST00000375427 I3L4J1 428 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 SOX12O15370 315 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 YEATS4O95619 227 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 TRPC1P48995 793 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 ANKRD20A4Q4UJ75 823 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 ANKRD20A8PQ5CZ79 823 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 ANKRD20A2Q5SQ80 823 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 ANKRD20A1Q5TYW2 823 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 PPP4R3AQ6IN85 833 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 SRCIN1Q9C0H9 1055 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 UBA5Q9GZZ9 404 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 NBPF26B4DH59 902 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 AAMPQ13685 434 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 NBPF14Q5TI25 921 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 TRMT44Q8IYL2 757 aaKnown RBP6.66□□□□□ -1.34
SCN2A-202ENST00000375427 NBPF15Q8N660 670 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 NUP88Q99567 741 aaPredicted RBP6.66□□□□□ -1.34
SCN2A-202ENST00000375427 ABT1Q9ULW3 272 aaKnown RBP6.66□□□□□ -1.34
SCN2A-202ENST00000375427 ZKSCAN5Q9Y2L8 839 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 PHLDB1Q86UU1 1377 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 EEA1Q15075 1411 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 CCDC88CQ9P219 2028 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 AMOTL2Q9Y2J4 779 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 DAB1O75553 588 aa6.65□□□□□ -1.34
SCN2A-202ENST00000375427 C16orf72Q14CZ0 275 aa6.65□□□□□ -1.34
SCN2A-202ENST00000375427 CNGA4Q8IV77 575 aa6.65□□□□□ -1.34
SCN2A-202ENST00000375427 NLRP7Q8WX94 980 aa6.65□□□□□ -1.34
SCN2A-202ENST00000375427 S100A1P23297 94 aa6.65□□□□□ -1.34
SCN2A-202ENST00000375427 SEPT3Q9UH03 358 aa6.65□□□□□ -1.34
SCN2A-202ENST00000375427 ROCK2O75116 1388 aaKnown RBP6.65□□□□□ -1.34
SCN2A-202ENST00000375427 SMARCA1P28370 1054 aa6.65□□□□□ -1.34
SCN2A-202ENST00000375427 NRG3P56975 720 aa6.65□□□□□ -1.34
SCN2A-202ENST00000375427 NDEL1Q9GZM8 345 aa6.65□□□□□ -1.34
SCN2A-202ENST00000375427 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.65□□□□□ -1.34
SCN2A-202ENST00000375427 EFCAB8A8MWE9 144 aa6.65□□□□□ -1.34
SCN2A-202ENST00000375427 NDUFAB1O14561 156 aa6.65□□□□□ -1.34
SCN2A-202ENST00000375427 RGS5O15539 181 aa6.65□□□□□ -1.34
SCN2A-202ENST00000375427 SERPINB10P48595 397 aa6.65□□□□□ -1.34
SCN2A-202ENST00000375427 EVCP57679 992 aa6.65□□□□□ -1.34
SCN2A-202ENST00000375427 KRT85P78386 507 aa6.65□□□□□ -1.34
SCN2A-202ENST00000375427 HAUS7Q99871 368 aa6.65□□□□□ -1.34
SCN2A-202ENST00000375427 VPS16Q9H269 839 aa6.65□□□□□ -1.34
SCN2A-202ENST00000375427 NUP62P37198 522 aaPredicted RBP6.65□□□□□ -1.35
SCN2A-202ENST00000375427 DAB2P98082 770 aa6.65□□□□□ -1.35
SCN2A-202ENST00000375427 RUNDC3AQ59EK9 446 aa6.65□□□□□ -1.35
SCN2A-202ENST00000375427 MUM1L1Q5H9M0 696 aa6.65□□□□□ -1.35
SCN2A-202ENST00000375427 EVI5LQ96CN4 794 aa6.65□□□□□ -1.35
SCN2A-202ENST00000375427 PHF8Q9UPP1 1060 aa6.65□□□□□ -1.35
SCN2A-202ENST00000375427 WASHC2AQ641Q2 1341 aa6.65□□□□□ -1.35
SCN2A-202ENST00000375427 SCAPERQ9BY12 1400 aa6.65□□□□□ -1.35
SCN2A-202ENST00000375427 H0Y626 953 aa6.65□□□□□ -1.35
SCN2A-202ENST00000375427 TRIM16O95361 564 aa6.65□□□□□ -1.35
SCN2A-202ENST00000375427 IFIT2P09913 472 aaKnown RBP6.65□□□□□ -1.35
SCN2A-202ENST00000375427 PYGMP11217 842 aa6.65□□□□□ -1.35
SCN2A-202ENST00000375427 CHMP4BP1P59074 171 aa6.65□□□□□ -1.35
SCN2A-202ENST00000375427 NFE2L2Q16236 605 aa6.65□□□□□ -1.35
SCN2A-202ENST00000375427 POTEEQ6S8J3 1075 aa6.65□□□□□ -1.35
SCN2A-202ENST00000375427 PLEKHM3Q6ZWE6 761 aa6.65□□□□□ -1.35
SCN2A-202ENST00000375427 PNMA8AQ86V59 439 aaPredicted RBP6.65□□□□□ -1.35
SCN2A-202ENST00000375427 GPR161Q8N6U8 529 aaKnown RBP6.65□□□□□ -1.35
SCN2A-202ENST00000375427 ZBED2Q9BTP6 218 aa6.65□□□□□ -1.35
SCN2A-202ENST00000375427 KTN1Q86UP2 1357 aaKnown RBP6.65□□□□□ -1.35
SCN2A-202ENST00000375427 IQCA1LA6NCM1 817 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 FAM178BQ8IXR5 827 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 THUMPD2Q9BTF0 503 aaKnown RBP6.64□□□□□ -1.35
SCN2A-202ENST00000375427 TSGA10Q9BZW7 698 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 MAP10Q9P2G4 905 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 MTRF1LQ9UGC7 380 aaKnown RBP6.64□□□□□ -1.35
SCN2A-202ENST00000375427 MICALL2Q8IY33 904 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 ACRBPQ8NEB7 543 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 TBC1D22AQ8WUA7 517 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 ABCF2Q9UG63 623 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 ZBTB39O15060 712 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 KRT76Q01546 638 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 DHX9Q08211 1270 aaKnown RBP6.64□□□□□ -1.35
SCN2A-202ENST00000375427 HIF1AQ16665 826 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 TRIM71Q2Q1W2 868 aaKnown RBP6.64□□□□□ -1.35
SCN2A-202ENST00000375427 ZC3H15Q8WU90 426 aaKnown RBP6.64□□□□□ -1.35
SCN2A-202ENST00000375427 MLPHQ9BV36 600 aaPredicted RBP6.64□□□□□ -1.35
SCN2A-202ENST00000375427 VPS37BQ9H9H4 285 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 APOBEC2Q9Y235 224 aaKnown RBP6.64□□□□□ -1.35
SCN2A-202ENST00000375427 GRK2P25098 689 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 BTN3A2P78410 334 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 ARHGAP4P98171 946 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.64□□□□□ -1.35
SCN2A-202ENST00000375427 DENND6BQ8NEG7 585 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 SIKE1Q9BRV8 207 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 C10orf88Q9H8K7 445 aa6.64□□□□□ -1.35
SCN2A-202ENST00000375427 KCNK9Q9NPC2 374 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms