RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 A0A087WUV0 522 aaPredicted RBP23.65■■□□□ 1.38
TMEFF1-201ENST00000374879 GOLGA6L9A6NEM1 432 aa23.65■■□□□ 1.38
TMEFF1-201ENST00000374879 CUTAO60888 179 aa23.65■■□□□ 1.38
TMEFF1-201ENST00000374879 MSL3Q8N5Y2 521 aaKnown RBP23.65■■□□□ 1.38
TMEFF1-201ENST00000374879 BAG1Q99933 345 aaPredicted RBP23.65■■□□□ 1.38
TMEFF1-201ENST00000374879 PHF8Q9UPP1 1060 aa23.65■■□□□ 1.38
TMEFF1-201ENST00000374879 FER1L4A9Z1Z3 1794 aa23.65■■□□□ 1.38
TMEFF1-201ENST00000374879 USP54Q70EL1 1684 aa23.65■■□□□ 1.38
TMEFF1-201ENST00000374879 CEMIPQ8WUJ3 1361 aa23.65■■□□□ 1.38
TMEFF1-201ENST00000374879 HIP1O00291 1037 aa23.64■■□□□ 1.38
TMEFF1-201ENST00000374879 NSUN7Q8NE18 718 aaKnown RBP23.64■■□□□ 1.38
TMEFF1-201ENST00000374879 FAM71BQ8TC56 605 aa23.64■■□□□ 1.38
TMEFF1-201ENST00000374879 NEK1Q96PY6 1258 aa23.64■■□□□ 1.38
TMEFF1-201ENST00000374879 SEC62Q99442 399 aaKnown RBP23.64■■□□□ 1.38
TMEFF1-201ENST00000374879 FAM204AQ9H8W3 233 aa23.64■■□□□ 1.38
TMEFF1-201ENST00000374879 LGR6Q9HBX8 967 aa23.64■■□□□ 1.38
TMEFF1-201ENST00000374879 DONSONQ9NYP3 566 aa23.64■■□□□ 1.38
TMEFF1-201ENST00000374879 IKBKBO14920 756 aa23.64■■□□□ 1.37
TMEFF1-201ENST00000374879 ATL3Q6DD88 541 aa23.64■■□□□ 1.37
TMEFF1-201ENST00000374879 ZNF622Q969S3 477 aaKnown RBP eCLIP23.64■■□□□ 1.37
TMEFF1-201ENST00000374879 HMG20BQ9P0W2 317 aa23.64■■□□□ 1.37
TMEFF1-201ENST00000374879 CTDNEP1O95476 244 aa23.63■■□□□ 1.37
TMEFF1-201ENST00000374879 CASP8Q14790 479 aa23.63■■□□□ 1.37
TMEFF1-201ENST00000374879 HSP90B2PQ58FF3 399 aa23.63■■□□□ 1.37
TMEFF1-201ENST00000374879 DNAJC21Q5F1R6 531 aaKnown RBP23.63■■□□□ 1.37
TMEFF1-201ENST00000374879 AACSQ86V21 672 aa23.63■■□□□ 1.37
TMEFF1-201ENST00000374879 IP6K1Q92551 441 aa23.63■■□□□ 1.37
TMEFF1-201ENST00000374879 KAT2BQ92831 832 aa23.63■■□□□ 1.37
TMEFF1-201ENST00000374879 CBFA2T2O43439 604 aa23.63■■□□□ 1.37
TMEFF1-201ENST00000374879 EIF4A1P60842 406 aaKnown RBP23.63■■□□□ 1.37
TMEFF1-201ENST00000374879 DNAAF4Q8WXU2 420 aa23.63■■□□□ 1.37
TMEFF1-201ENST00000374879 ERLIN1O75477 346 aa23.63■■□□□ 1.37
TMEFF1-201ENST00000374879 WDHD1O75717 1129 aaPredicted RBP23.63■■□□□ 1.37
TMEFF1-201ENST00000374879 MAP2K2P36507 400 aa23.63■■□□□ 1.37
TMEFF1-201ENST00000374879 PLEKHO1Q53GL0 409 aaPredicted RBP23.63■■□□□ 1.37
TMEFF1-201ENST00000374879 DESI2Q9BSY9 194 aa23.63■■□□□ 1.37
TMEFF1-201ENST00000374879 CHPF2Q9P2E5 772 aa23.63■■□□□ 1.37
TMEFF1-201ENST00000374879 LTN1O94822 1766 aa23.62■■□□□ 1.37
TMEFF1-201ENST00000374879 MSANTD4Q8NCY6 345 aa23.62■■□□□ 1.37
TMEFF1-201ENST00000374879 ANKRD20A12PQ8NF67 263 aa23.62■■□□□ 1.37
TMEFF1-201ENST00000374879 PA2G4Q9UQ80 394 aaKnown RBP23.62■■□□□ 1.37
TMEFF1-201ENST00000374879 A0A1W2PQ27 194 aa23.62■■□□□ 1.37
TMEFF1-201ENST00000374879 A0A1W2PQ64 194 aa23.62■■□□□ 1.37
TMEFF1-201ENST00000374879 A0A1W2PQD8 194 aa23.62■■□□□ 1.37
TMEFF1-201ENST00000374879 PTPDC1A2A3K4 754 aa23.62■■□□□ 1.37
TMEFF1-201ENST00000374879 MTX1Q13505 466 aa23.62■■□□□ 1.37
TMEFF1-201ENST00000374879 PDILTQ8N807 584 aa23.62■■□□□ 1.37
TMEFF1-201ENST00000374879 RBM33Q96EV2 1170 aaKnown RBP23.62■■□□□ 1.37
TMEFF1-201ENST00000374879 FSD1Q9BTV5 496 aa23.62■■□□□ 1.37
TMEFF1-201ENST00000374879 SETD1BQ9UPS6 1966 aaKnown RBP23.61■■□□□ 1.37
TMEFF1-201ENST00000374879 BRD2P25440 801 aaKnown RBP23.61■■□□□ 1.37
TMEFF1-201ENST00000374879 SUFUQ9UMX1 484 aa23.61■■□□□ 1.37
TMEFF1-201ENST00000374879 ZNF202O95125 648 aa23.61■■□□□ 1.37
TMEFF1-201ENST00000374879 LLPHQ9BRT6 129 aaKnown RBP23.61■■□□□ 1.37
TMEFF1-201ENST00000374879 MED23Q9ULK4 1368 aa23.6■■□□□ 1.37
TMEFF1-201ENST00000374879 PI4KAP2A4QPH2 592 aa23.6■■□□□ 1.37
TMEFF1-201ENST00000374879 KCNQ3O43525 872 aa23.6■■□□□ 1.37
TMEFF1-201ENST00000374879 VSNL1P62760 191 aa23.6■■□□□ 1.37
TMEFF1-201ENST00000374879 PI4KAP1Q8N8J0 262 aa23.6■■□□□ 1.37
TMEFF1-201ENST00000374879 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.6■■□□□ 1.37
TMEFF1-201ENST00000374879 TAF5LO75529 589 aa23.6■■□□□ 1.37
TMEFF1-201ENST00000374879 RHOXF2BP0C7M4 288 aa23.6■■□□□ 1.37
TMEFF1-201ENST00000374879 ADKP55263 362 aaKnown RBP23.6■■□□□ 1.37
TMEFF1-201ENST00000374879 SF3A1Q15459 793 aaKnown RBP23.6■■□□□ 1.37
TMEFF1-201ENST00000374879 RHOXF2Q9BQY4 288 aa23.6■■□□□ 1.37
TMEFF1-201ENST00000374879 MRPL44Q9H9J2 332 aaKnown RBP23.6■■□□□ 1.37
TMEFF1-201ENST00000374879 INTS13Q9NVM9 706 aa23.6■■□□□ 1.37
TMEFF1-201ENST00000374879 RTEL1Q9NZ71 1219 aa23.6■■□□□ 1.37
TMEFF1-201ENST00000374879 LRRIQ3A6PVS8 624 aaPredicted RBP23.59■■□□□ 1.37
TMEFF1-201ENST00000374879 POTEB2H3BUK9 544 aa23.59■■□□□ 1.37
TMEFF1-201ENST00000374879 ATP6V1AP38606 617 aa23.59■■□□□ 1.37
TMEFF1-201ENST00000374879 MNAT1P51948 309 aa23.59■■□□□ 1.37
TMEFF1-201ENST00000374879 BOLA2Q9H3K6 86 aa23.59■■□□□ 1.37
TMEFF1-201ENST00000374879 CLIC4Q9Y696 253 aa23.59■■□□□ 1.37
TMEFF1-201ENST00000374879 ABCC6O95255 1503 aa23.59■■□□□ 1.37
TMEFF1-201ENST00000374879 STX10O60499 249 aa23.59■■□□□ 1.37
TMEFF1-201ENST00000374879 PFKFB2O60825 505 aa23.59■■□□□ 1.37
TMEFF1-201ENST00000374879 ERLIN2O94905 339 aa23.59■■□□□ 1.37
TMEFF1-201ENST00000374879 ANXA1P04083 346 aa23.59■■□□□ 1.37
TMEFF1-201ENST00000374879 LIG3P49916 1009 aa23.59■■□□□ 1.37
TMEFF1-201ENST00000374879 EIF5P55010 431 aaKnown RBP23.59■■□□□ 1.37
TMEFF1-201ENST00000374879 KRT32Q14532 448 aa23.59■■□□□ 1.37
TMEFF1-201ENST00000374879 BEND3Q5T5X7 828 aa23.59■■□□□ 1.37
TMEFF1-201ENST00000374879 TTLL5Q6EMB2 1281 aa23.59■■□□□ 1.37
TMEFF1-201ENST00000374879 LINC00301Q8NCQ3 95 aa23.59■■□□□ 1.37
TMEFF1-201ENST00000374879 CCT2P78371 535 aaKnown RBP23.58■■□□□ 1.37
TMEFF1-201ENST00000374879 CCDC8Q9H0W5 538 aaPredicted RBP23.58■■□□□ 1.37
TMEFF1-201ENST00000374879 CLIC6Q96NY7 704 aa23.58■■□□□ 1.36
TMEFF1-201ENST00000374879 TFRCP02786 760 aaKnown RBP23.57■■□□□ 1.36
TMEFF1-201ENST00000374879 HOXB7P09629 217 aa23.57■■□□□ 1.36
TMEFF1-201ENST00000374879 HNRNPH1P31943 449 aaKnown RBP23.57■■□□□ 1.36
TMEFF1-201ENST00000374879 MYL5Q02045 173 aa23.57■■□□□ 1.36
TMEFF1-201ENST00000374879 TEFQ10587 303 aa23.57■■□□□ 1.36
TMEFF1-201ENST00000374879 STK38Q15208 465 aa23.57■■□□□ 1.36
TMEFF1-201ENST00000374879 CEP112Q8N8E3 955 aa23.57■■□□□ 1.36
TMEFF1-201ENST00000374879 TC2NQ8N9U0 490 aa23.57■■□□□ 1.36
TMEFF1-201ENST00000374879 FANCLQ9NW38 375 aa23.57■■□□□ 1.36
TMEFF1-201ENST00000374879 EXOC5O00471 708 aa23.57■■□□□ 1.36
TMEFF1-201ENST00000374879 ALDH1L1O75891 902 aa23.57■■□□□ 1.36
TMEFF1-201ENST00000374879 TBX2Q13207 712 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms