RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 NBPF11Q86T75 865 aa20.32■□□□□ 0.84
COL16A1-203ENST00000373672 PLCB3Q01970 1234 aa20.32■□□□□ 0.84
COL16A1-203ENST00000373672 CCDC63Q8NA47 563 aa20.32■□□□□ 0.84
COL16A1-203ENST00000373672 DCAF5Q96JK2 942 aa20.32■□□□□ 0.84
COL16A1-203ENST00000373672 SMC6Q96SB8 1091 aa20.32■□□□□ 0.84
COL16A1-203ENST00000373672 RPL13P26373 211 aaKnown RBP20.32■□□□□ 0.84
COL16A1-203ENST00000373672 SERPINA10Q9UK55 444 aa20.32■□□□□ 0.84
COL16A1-203ENST00000373672 FAM160A1Q05DH4 1040 aa20.32■□□□□ 0.84
COL16A1-203ENST00000373672 ZRANB1Q9UGI0 708 aa20.32■□□□□ 0.84
COL16A1-203ENST00000373672 A2MP01023 1474 aa20.32■□□□□ 0.84
COL16A1-203ENST00000373672 PARP1P09874 1014 aaKnown RBP20.32■□□□□ 0.84
COL16A1-203ENST00000373672 NCBP1Q09161 790 aaKnown RBP20.32■□□□□ 0.84
COL16A1-203ENST00000373672 ATP6V0A2Q9Y487 856 aa20.32■□□□□ 0.84
COL16A1-203ENST00000373672 AKR1B15C9JRZ8 316 aaPredicted RBP20.31■□□□□ 0.84
COL16A1-203ENST00000373672 ARFGAP2Q8N6H7 521 aa20.31■□□□□ 0.84
COL16A1-203ENST00000373672 OTUD6BQ8N6M0 293 aa20.31■□□□□ 0.84
COL16A1-203ENST00000373672 VPS18Q9P253 973 aa20.31■□□□□ 0.84
COL16A1-203ENST00000373672 CEP83Q9Y592 693 aa20.31■□□□□ 0.84
COL16A1-203ENST00000373672 RPS6KB1P23443 525 aa20.31■□□□□ 0.84
COL16A1-203ENST00000373672 SV2BQ7L1I2 683 aa20.31■□□□□ 0.84
COL16A1-203ENST00000373672 MAPKBP1O60336 1514 aa20.31■□□□□ 0.84
COL16A1-203ENST00000373672 ATP2A2P16615 1042 aaKnown RBP20.31■□□□□ 0.84
COL16A1-203ENST00000373672 RXRAP19793 462 aa20.31■□□□□ 0.84
COL16A1-203ENST00000373672 HELBQ8NG08 1087 aaPredicted RBP20.31■□□□□ 0.84
COL16A1-203ENST00000373672 CCDC65Q8IXS2 484 aa20.3■□□□□ 0.84
COL16A1-203ENST00000373672 IFT81Q8WYA0 676 aa20.3■□□□□ 0.84
COL16A1-203ENST00000373672 BAG1Q99933 345 aaPredicted RBP20.3■□□□□ 0.84
COL16A1-203ENST00000373672 RHOXF2BP0C7M4 288 aa20.3■□□□□ 0.84
COL16A1-203ENST00000373672 RHOXF2Q9BQY4 288 aa20.3■□□□□ 0.84
COL16A1-203ENST00000373672 ZC3H12CQ9C0D7 883 aaKnown RBP20.3■□□□□ 0.84
COL16A1-203ENST00000373672 ZBTB16Q05516 673 aa20.3■□□□□ 0.84
COL16A1-203ENST00000373672 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.3■□□□□ 0.84
COL16A1-203ENST00000373672 MTUS1Q9ULD2 1270 aa20.3■□□□□ 0.84
COL16A1-203ENST00000373672 WDR7Q9Y4E6 1490 aa20.3■□□□□ 0.84
COL16A1-203ENST00000373672 PLCD1P51178 756 aa20.3■□□□□ 0.84
COL16A1-203ENST00000373672 RAB3IL1Q8TBN0 382 aa20.3■□□□□ 0.84
COL16A1-203ENST00000373672 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.3■□□□□ 0.84
COL16A1-203ENST00000373672 RNMTO43148 476 aaKnown RBP20.3■□□□□ 0.84
COL16A1-203ENST00000373672 PPP1R7Q15435 360 aa20.3■□□□□ 0.84
COL16A1-203ENST00000373672 MRPS9P82933 396 aaKnown RBP20.29■□□□□ 0.84
COL16A1-203ENST00000373672 VEZTQ9HBM0 779 aa20.29■□□□□ 0.84
COL16A1-203ENST00000373672 DENND2AQ9ULE3 1009 aa20.29■□□□□ 0.84
COL16A1-203ENST00000373672 ARL1P40616 181 aaPredicted RBP20.29■□□□□ 0.84
COL16A1-203ENST00000373672 MBD4O95243 580 aa20.29■□□□□ 0.84
COL16A1-203ENST00000373672 TRIM14Q14142 442 aa20.29■□□□□ 0.84
COL16A1-203ENST00000373672 PLIN2Q99541 437 aa20.29■□□□□ 0.84
COL16A1-203ENST00000373672 CTNND2Q9UQB3 1225 aa20.29■□□□□ 0.84
COL16A1-203ENST00000373672 EBAG9O00559 213 aa20.29■□□□□ 0.84
COL16A1-203ENST00000373672 RILPL1Q5EBL4 403 aa20.29■□□□□ 0.84
COL16A1-203ENST00000373672 FAM212AQ96EL1 285 aa20.29■□□□□ 0.84
COL16A1-203ENST00000373672 VWA3AA6NCI4 1184 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 SEL1L2Q5TEA6 688 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 PODXL2Q9NZ53 605 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 PCDH11XQ9BZA7 1347 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 PCDH11YQ9BZA8 1340 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 CCDC122Q5T0U0 273 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 JAKMIP2Q96AA8 810 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 PPP1R9BQ96SB3 815 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 A0A1B0GVL5 298 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 PLS1Q14651 629 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 EYA3Q99504 573 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 SYCP2Q9BX26 1530 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 ZNF174Q15697 407 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 KRT24Q2M2I5 525 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 DPH6Q7L8W6 267 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 KIAA1524Q8TCG1 905 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 RTCBQ9Y3I0 505 aaKnown RBP20.28■□□□□ 0.84
COL16A1-203ENST00000373672 RAPGEF1Q13905 1077 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 HDXQ7Z353 690 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 CCDC94Q9BW85 323 aaPredicted RBP20.28■□□□□ 0.84
COL16A1-203ENST00000373672 TRPM2O94759 1503 aa20.28■□□□□ 0.84
COL16A1-203ENST00000373672 CALCOCO2Q13137 446 aa20.27■□□□□ 0.84
COL16A1-203ENST00000373672 DCAF17Q5H9S7 520 aaPredicted RBP20.27■□□□□ 0.84
COL16A1-203ENST00000373672 TMEM87BQ96K49 555 aa20.27■□□□□ 0.84
COL16A1-203ENST00000373672 EYA1Q99502 592 aa20.27■□□□□ 0.84
COL16A1-203ENST00000373672 DEXIO95424 95 aa20.27■□□□□ 0.84
COL16A1-203ENST00000373672 FRMD4BQ9Y2L6 1034 aa20.27■□□□□ 0.84
COL16A1-203ENST00000373672 EPB41P11171 864 aaKnown RBP20.27■□□□□ 0.84
COL16A1-203ENST00000373672 CPLX4Q7Z7G2 160 aa20.27■□□□□ 0.84
COL16A1-203ENST00000373672 TTC6Q86TZ1 520 aa20.27■□□□□ 0.84
COL16A1-203ENST00000373672 BIVM-ERCC5R4GMW8 1640 aa20.27■□□□□ 0.84
COL16A1-203ENST00000373672 NDC80O14777 642 aa20.27■□□□□ 0.83
COL16A1-203ENST00000373672 MICALL1Q8N3F8 863 aa20.27■□□□□ 0.83
COL16A1-203ENST00000373672 AOX1Q06278 1338 aa20.26■□□□□ 0.83
COL16A1-203ENST00000373672 LLPHQ9BRT6 129 aaKnown RBP20.26■□□□□ 0.83
COL16A1-203ENST00000373672 NOC4LQ9BVI4 516 aaKnown RBP20.26■□□□□ 0.83
COL16A1-203ENST00000373672 NSFL1CQ9UNZ2 370 aaKnown RBP20.26■□□□□ 0.83
COL16A1-203ENST00000373672 SMIM23A6NLE4 172 aa20.26■□□□□ 0.83
COL16A1-203ENST00000373672 TERF1P54274 439 aa20.26■□□□□ 0.83
COL16A1-203ENST00000373672 VWA3BQ502W6 1294 aa20.26■□□□□ 0.83
COL16A1-203ENST00000373672 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.26■□□□□ 0.83
COL16A1-203ENST00000373672 ZKSCAN3Q9BRR0 538 aa20.26■□□□□ 0.83
COL16A1-203ENST00000373672 FAM76AQ8TAV0 307 aa20.26■□□□□ 0.83
COL16A1-203ENST00000373672 ZBTB21Q9ULJ3 1066 aa20.26■□□□□ 0.83
COL16A1-203ENST00000373672 DDX23Q9BUQ8 820 aaKnown RBP20.26■□□□□ 0.83
COL16A1-203ENST00000373672 CFAP58Q5T655 872 aa20.26■□□□□ 0.83
COL16A1-203ENST00000373672 PHACTR3Q96KR7 559 aa20.26■□□□□ 0.83
COL16A1-203ENST00000373672 SAMD15Q9P1V8 674 aa20.26■□□□□ 0.83
COL16A1-203ENST00000373672 TXNDC16Q9P2K2 825 aa20.26■□□□□ 0.83
COL16A1-203ENST00000373672 SLC27A2O14975 620 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms