RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 FANCLQ9NW38 375 aa13.49□□□□□ -0.25
SMARCA1-201ENST00000371121 VPS18Q9P253 973 aa13.49□□□□□ -0.25
SMARCA1-201ENST00000371121 MYH8P13535 1937 aa13.49□□□□□ -0.25
SMARCA1-201ENST00000371121 MYO5AQ9Y4I1 1855 aaKnown RBP13.49□□□□□ -0.25
SMARCA1-201ENST00000371121 LRRIQ3A6PVS8 624 aaPredicted RBP13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 ADKP55263 362 aaKnown RBP13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 PLEKHO1Q53GL0 409 aaPredicted RBP13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 KAT2BQ92831 832 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 PXDNQ92626 1479 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 CUTAO60888 179 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 IGKV5-2P06315 115 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 HOXC9P31274 260 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 MAGEA9P43362 315 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 FCHSD1Q86WN1 690 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 MSANTD4Q8NCY6 345 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 SDF4Q9BRK5 362 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 ZSWIM4Q9H7M6 989 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 HIP1O00291 1037 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 FOXN1O15353 648 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 UBASH3AP57075 661 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 CORO7P57737 925 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 GNG11P61952 73 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 SART3Q15020 963 aaKnown RBP13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 SHC4Q6S5L8 630 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 METTL16Q86W50 562 aaKnown RBP13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 CLIC6Q96NY7 704 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 ABCB6Q9NP58 842 aa13.48□□□□□ -0.25
SMARCA1-201ENST00000371121 PNOCQ13519 176 aa13.47□□□□□ -0.25
SMARCA1-201ENST00000371121 HSP90AA4PQ58FG1 418 aa13.47□□□□□ -0.25
SMARCA1-201ENST00000371121 ATL3Q6DD88 541 aa13.47□□□□□ -0.25
SMARCA1-201ENST00000371121 APTXQ7Z2E3 356 aaKnown RBP13.47□□□□□ -0.25
SMARCA1-201ENST00000371121 SECISBP2LQ93073 1101 aaKnown RBP13.47□□□□□ -0.25
SMARCA1-201ENST00000371121 POLR3EQ9NVU0 708 aa13.47□□□□□ -0.25
SMARCA1-201ENST00000371121 HPS5Q9UPZ3 1129 aa13.47□□□□□ -0.25
SMARCA1-201ENST00000371121 JRKLQ9Y4A0 524 aa13.47□□□□□ -0.25
SMARCA1-201ENST00000371121 POLR3DP05423 398 aaPredicted RBP13.47□□□□□ -0.25
SMARCA1-201ENST00000371121 SEC31BQ9NQW1 1179 aa13.47□□□□□ -0.25
SMARCA1-201ENST00000371121 SETD1BQ9UPS6 1966 aaKnown RBP13.47□□□□□ -0.25
SMARCA1-201ENST00000371121 HSP90B1P14625 803 aaKnown RBP13.47□□□□□ -0.25
SMARCA1-201ENST00000371121 VSNL1P62760 191 aa13.47□□□□□ -0.25
SMARCA1-201ENST00000371121 FMR1Q06787 632 aaKnown RBP eCLIP13.47□□□□□ -0.25
SMARCA1-201ENST00000371121 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.47□□□□□ -0.25
SMARCA1-201ENST00000371121 UBR1Q8IWV7 1749 aa13.47□□□□□ -0.25
SMARCA1-201ENST00000371121 ARHGAP6O43182 974 aa13.46□□□□□ -0.25
SMARCA1-201ENST00000371121 PRPF6O94906 941 aaKnown RBP13.46□□□□□ -0.25
SMARCA1-201ENST00000371121 SYF2O95926 243 aaKnown RBP13.46□□□□□ -0.25
SMARCA1-201ENST00000371121 SLC3A2P08195 630 aaKnown RBP13.46□□□□□ -0.25
SMARCA1-201ENST00000371121 RFX5P48382 616 aaPredicted RBP13.46□□□□□ -0.25
SMARCA1-201ENST00000371121 MDM2Q00987 491 aaPredicted RBP13.46□□□□□ -0.25
SMARCA1-201ENST00000371121 PDIA6Q15084 440 aa13.46□□□□□ -0.25
SMARCA1-201ENST00000371121 ZNF18P17022 549 aa13.46□□□□□ -0.25
SMARCA1-201ENST00000371121 DHX32Q7L7V1 743 aaKnown RBP13.46□□□□□ -0.25
SMARCA1-201ENST00000371121 MSL3Q8N5Y2 521 aaKnown RBP13.46□□□□□ -0.25
SMARCA1-201ENST00000371121 CPP00450 1065 aa13.46□□□□□ -0.26
SMARCA1-201ENST00000371121 TPM1P09493 284 aa13.46□□□□□ -0.26
SMARCA1-201ENST00000371121 GTF2A1P52655 376 aaPredicted RBP13.46□□□□□ -0.26
SMARCA1-201ENST00000371121 MCM6Q14566 821 aa13.46□□□□□ -0.26
SMARCA1-201ENST00000371121 RAD9BQ6WBX8 426 aa13.46□□□□□ -0.26
SMARCA1-201ENST00000371121 SOWAHDA6NJG2 315 aa13.45□□□□□ -0.26
SMARCA1-201ENST00000371121 ATP2B1P20020 1258 aa13.45□□□□□ -0.26
SMARCA1-201ENST00000371121 KARSQ15046 597 aaKnown RBP13.45□□□□□ -0.26
SMARCA1-201ENST00000371121 GPATCH3Q96I76 525 aa13.45□□□□□ -0.26
SMARCA1-201ENST00000371121 KRT32Q14532 448 aa13.45□□□□□ -0.26
SMARCA1-201ENST00000371121 GOLGA1Q92805 767 aa13.45□□□□□ -0.26
SMARCA1-201ENST00000371121 AFDNP55196 1824 aaKnown RBP13.45□□□□□ -0.26
SMARCA1-201ENST00000371121 PTPAQ15257 358 aa13.45□□□□□ -0.26
SMARCA1-201ENST00000371121 BAG1Q99933 345 aaPredicted RBP13.45□□□□□ -0.26
SMARCA1-201ENST00000371121 TOMM22Q9NS69 142 aa13.45□□□□□ -0.26
SMARCA1-201ENST00000371121 E7EWF7 191 aa13.44□□□□□ -0.26
SMARCA1-201ENST00000371121 ATP5JP18859 108 aa13.44□□□□□ -0.26
SMARCA1-201ENST00000371121 BRD3Q15059 726 aa13.44□□□□□ -0.26
SMARCA1-201ENST00000371121 MYSM1Q5VVJ2 828 aa13.44□□□□□ -0.26
SMARCA1-201ENST00000371121 ZNF396Q96N95 335 aaPredicted RBP13.44□□□□□ -0.26
SMARCA1-201ENST00000371121 LAMB4A4D0S4 1761 aa13.44□□□□□ -0.26
SMARCA1-201ENST00000371121 ADAMTS7Q9UKP4 1686 aa13.44□□□□□ -0.26
SMARCA1-201ENST00000371121 SPTLC2O15270 562 aa13.44□□□□□ -0.26
SMARCA1-201ENST00000371121 CMA1P23946 247 aa13.44□□□□□ -0.26
SMARCA1-201ENST00000371121 KCNV1Q6PIU1 500 aa13.44□□□□□ -0.26
SMARCA1-201ENST00000371121 SRGAP1Q7Z6B7 1085 aa13.44□□□□□ -0.26
SMARCA1-201ENST00000371121 DRC1Q96MC2 740 aa13.44□□□□□ -0.26
SMARCA1-201ENST00000371121 MAP3K14Q99558 947 aa13.44□□□□□ -0.26
SMARCA1-201ENST00000371121 PUF60Q9UHX1 559 aaKnown RBP13.44□□□□□ -0.26
SMARCA1-201ENST00000371121 FER1L4A9Z1Z3 1794 aa13.44□□□□□ -0.26
SMARCA1-201ENST00000371121 FAM237AA0A1B0GTK4 181 aa13.43□□□□□ -0.26
SMARCA1-201ENST00000371121 TNNT3P45378 269 aaPredicted RBP13.43□□□□□ -0.26
SMARCA1-201ENST00000371121 NOA1Q8NC60 698 aaKnown RBP13.43□□□□□ -0.26
SMARCA1-201ENST00000371121 GRM8O00222 908 aa13.43□□□□□ -0.26
SMARCA1-201ENST00000371121 STX10O60499 249 aa13.43□□□□□ -0.26
SMARCA1-201ENST00000371121 YEATS4O95619 227 aa13.43□□□□□ -0.26
SMARCA1-201ENST00000371121 HOXB7P09629 217 aa13.43□□□□□ -0.26
SMARCA1-201ENST00000371121 CHMP4BP1P59074 171 aa13.43□□□□□ -0.26
SMARCA1-201ENST00000371121 MYL5Q02045 173 aa13.43□□□□□ -0.26
SMARCA1-201ENST00000371121 GPS2Q13227 327 aa13.43□□□□□ -0.26
SMARCA1-201ENST00000371121 CFAP100Q494V2 611 aa13.43□□□□□ -0.26
SMARCA1-201ENST00000371121 LONRF3Q496Y0 759 aa13.43□□□□□ -0.26
SMARCA1-201ENST00000371121 TTLL5Q6EMB2 1281 aa13.43□□□□□ -0.26
SMARCA1-201ENST00000371121 AIFM3Q96NN9 605 aa13.43□□□□□ -0.26
SMARCA1-201ENST00000371121 ANKARQ7Z5J8 1434 aa13.43□□□□□ -0.26
SMARCA1-201ENST00000371121 MARCKSP29966 332 aaPredicted RBP13.43□□□□□ -0.26
SMARCA1-201ENST00000371121 GSCP56915 257 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms