RNA–Protein interactions for RNA: ENST00000370328.3

GABRE-201, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRE, Length 3,152 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-201ENST00000370328 TRIM6-TRIM34B2RNG4 842 aa9.44□□□□□ -0.9
GABRE-201ENST00000370328 MAP1SQ66K74 1059 aaPredicted RBP9.44□□□□□ -0.9
GABRE-201ENST00000370328 ZNF804AQ7Z570 1209 aa9.44□□□□□ -0.9
GABRE-201ENST00000370328 VEZTQ9HBM0 779 aa9.44□□□□□ -0.9
GABRE-201ENST00000370328 LRP2BPQ9P2M1 347 aa9.44□□□□□ -0.9
GABRE-201ENST00000370328 CGNQ9P2M7 1197 aaKnown RBP9.44□□□□□ -0.9
GABRE-201ENST00000370328 FZD1Q9UP38 647 aa9.44□□□□□ -0.9
GABRE-201ENST00000370328 GOLIM4O00461 696 aa9.44□□□□□ -0.9
GABRE-201ENST00000370328 RASGRF1Q13972 1273 aa9.44□□□□□ -0.9
GABRE-201ENST00000370328 RILPL2Q969X0 211 aa9.44□□□□□ -0.9
GABRE-201ENST00000370328 KIF1BPQ96EK5 621 aa9.44□□□□□ -0.9
GABRE-201ENST00000370328 FAM13BQ9NYF5 915 aa9.44□□□□□ -0.9
GABRE-201ENST00000370328 POLA2Q14181 598 aa9.43□□□□□ -0.9
GABRE-201ENST00000370328 CCDC158Q5M9N0 1113 aa9.43□□□□□ -0.9
GABRE-201ENST00000370328 CC2D2BQ6DHV5 1058 aa9.43□□□□□ -0.9
GABRE-201ENST00000370328 MICALL2Q8IY33 904 aa9.43□□□□□ -0.9
GABRE-201ENST00000370328 OGFOD1Q8N543 542 aa9.43□□□□□ -0.9
GABRE-201ENST00000370328 TTF2Q9UNY4 1162 aaKnown RBP9.43□□□□□ -0.9
GABRE-201ENST00000370328 LEMD3Q9Y2U8 911 aa9.43□□□□□ -0.9
GABRE-201ENST00000370328 CNOT7Q9UIV1 285 aaKnown RBP9.43□□□□□ -0.9
GABRE-201ENST00000370328 IBTKQ9P2D0 1353 aaPredicted RBP9.43□□□□□ -0.9
GABRE-201ENST00000370328 ZAP70P43403 619 aa9.42□□□□□ -0.9
GABRE-201ENST00000370328 MTX1Q13505 466 aa9.42□□□□□ -0.9
GABRE-201ENST00000370328 VGLL2Q8N8G2 317 aa9.42□□□□□ -0.9
GABRE-201ENST00000370328 MIGA1Q8NAN2 632 aa9.42□□□□□ -0.9
GABRE-201ENST00000370328 SUPT20HQ8NEM7 779 aa9.42□□□□□ -0.9
GABRE-201ENST00000370328 LMOD1P29536 600 aaPredicted RBP9.42□□□□□ -0.9
GABRE-201ENST00000370328 CACNA1SQ13698 1873 aa9.42□□□□□ -0.9
GABRE-201ENST00000370328 UBE4AQ14139 1066 aa9.42□□□□□ -0.9
GABRE-201ENST00000370328 AKAP2Q9Y2D5 859 aa9.42□□□□□ -0.9
GABRE-201ENST00000370328 ANKRD31Q8N7Z5 1873 aa9.42□□□□□ -0.9
GABRE-201ENST00000370328 USP17L3A6NCW0 530 aa9.42□□□□□ -0.9
GABRE-201ENST00000370328 USP17L4A6NCW7 530 aa9.42□□□□□ -0.9
GABRE-201ENST00000370328 SLURP2P0DP57 97 aa9.42□□□□□ -0.9
GABRE-201ENST00000370328 DMTNQ08495 405 aa9.42□□□□□ -0.9
GABRE-201ENST00000370328 TCP10Q12799 353 aa9.42□□□□□ -0.9
GABRE-201ENST00000370328 NBPF9Q3BBW0 867 aa9.42□□□□□ -0.9
GABRE-201ENST00000370328 USP17L1Q7RTZ2 530 aa9.42□□□□□ -0.9
GABRE-201ENST00000370328 CERS5Q8N5B7 392 aa9.42□□□□□ -0.9
GABRE-201ENST00000370328 ZNF831Q5JPB2 1677 aa9.41□□□□□ -0.9
GABRE-201ENST00000370328 MCAMP43121 646 aa9.41□□□□□ -0.9
GABRE-201ENST00000370328 DCTPP1Q9H773 170 aa9.41□□□□□ -0.9
GABRE-201ENST00000370328 GLTPD2A6NH11 291 aa9.41□□□□□ -0.9
GABRE-201ENST00000370328 TMC4Q7Z404 712 aa9.41□□□□□ -0.9
GABRE-201ENST00000370328 BANK1Q8NDB2 785 aa9.41□□□□□ -0.9
GABRE-201ENST00000370328 TRPM4Q8TD43 1214 aa9.41□□□□□ -0.9
GABRE-201ENST00000370328 GNL3LQ9NVN8 582 aaKnown RBP9.41□□□□□ -0.9
GABRE-201ENST00000370328 SETQ01105 290 aaPredicted RBP9.4□□□□□ -0.9
GABRE-201ENST00000370328 PICALMQ13492 652 aa9.4□□□□□ -0.9
GABRE-201ENST00000370328 PODNQ7Z5L7 613 aa9.4□□□□□ -0.9
GABRE-201ENST00000370328 DZIP1Q86YF9 867 aaKnown RBP9.4□□□□□ -0.9
GABRE-201ENST00000370328 FAM177A1Q8N128 213 aaPredicted RBP9.4□□□□□ -0.9
GABRE-201ENST00000370328 HMG20BQ9P0W2 317 aa9.4□□□□□ -0.9
GABRE-201ENST00000370328 RTL9Q8NET4 1388 aa9.4□□□□□ -0.9
GABRE-201ENST00000370328 USP17L8P0C7I0 530 aa9.4□□□□□ -0.9
GABRE-201ENST00000370328 HSP90AB4PQ58FF6 505 aa9.4□□□□□ -0.9
GABRE-201ENST00000370328 COA1Q9GZY4 146 aa9.4□□□□□ -0.9
GABRE-201ENST00000370328 AOX1Q06278 1338 aa9.4□□□□□ -0.91
GABRE-201ENST00000370328 COL11A2P13942 1736 aaPredicted RBP9.4□□□□□ -0.91
GABRE-201ENST00000370328 H7C1D1 291 aa9.4□□□□□ -0.91
GABRE-201ENST00000370328 SPATA5Q8NB90 893 aa9.4□□□□□ -0.91
GABRE-201ENST00000370328 TDRD3Q9H7E2 651 aaKnown RBP9.4□□□□□ -0.91
GABRE-201ENST00000370328 TRAF5O00463 557 aa9.39□□□□□ -0.91
GABRE-201ENST00000370328 CIAO1O76071 339 aa9.39□□□□□ -0.91
GABRE-201ENST00000370328 FOXD4L5Q5VV16 416 aaPredicted RBP9.39□□□□□ -0.91
GABRE-201ENST00000370328 ERC1Q8IUD2 1116 aa9.39□□□□□ -0.91
GABRE-201ENST00000370328 FOXD4L4Q8WXT5 416 aaPredicted RBP9.39□□□□□ -0.91
GABRE-201ENST00000370328 RIC1Q4ADV7 1423 aa9.39□□□□□ -0.91
GABRE-201ENST00000370328 BCORQ6W2J9 1755 aa9.39□□□□□ -0.91
GABRE-201ENST00000370328 TCP10L2B9ZVM9 353 aa9.39□□□□□ -0.91
GABRE-201ENST00000370328 ECM2O94769 699 aaPredicted RBP9.39□□□□□ -0.91
GABRE-201ENST00000370328 VEGFAP15692 232 aaPredicted RBP9.39□□□□□ -0.91
GABRE-201ENST00000370328 TNIP1Q15025 636 aa9.39□□□□□ -0.91
GABRE-201ENST00000370328 CHD1LQ86WJ1 897 aa9.39□□□□□ -0.91
GABRE-201ENST00000370328 ZSCAN29Q8IWY8 852 aaPredicted RBP9.39□□□□□ -0.91
GABRE-201ENST00000370328 LOC102724159A0A0B4J2E5 919 aa9.38□□□□□ -0.91
GABRE-201ENST00000370328 FZD9O00144 591 aa9.38□□□□□ -0.91
GABRE-201ENST00000370328 FGFR2P21802 821 aa9.38□□□□□ -0.91
GABRE-201ENST00000370328 EPHX2P34913 555 aa9.38□□□□□ -0.91
GABRE-201ENST00000370328 CLCN1P35523 988 aa9.38□□□□□ -0.91
GABRE-201ENST00000370328 PWP2Q15269 919 aaKnown RBP9.38□□□□□ -0.91
GABRE-201ENST00000370328 KDM2BQ8NHM5 1336 aa9.38□□□□□ -0.91
GABRE-201ENST00000370328 COL4A5P29400 1685 aa9.38□□□□□ -0.91
GABRE-201ENST00000370328 LDHBP07195 334 aaKnown RBP9.38□□□□□ -0.91
GABRE-201ENST00000370328 TPM2P07951 284 aa9.38□□□□□ -0.91
GABRE-201ENST00000370328 DACT2Q5SW24 774 aa9.38□□□□□ -0.91
GABRE-201ENST00000370328 UTP14CQ5TAP6 766 aaKnown RBP9.38□□□□□ -0.91
GABRE-201ENST00000370328 GLIS2Q9BZE0 524 aaPredicted RBP9.38□□□□□ -0.91
GABRE-201ENST00000370328 AATFQ9NY61 560 aaKnown RBP eCLIP9.38□□□□□ -0.914e-8■□□□□ 10.6
GABRE-201ENST00000370328 CACNA1FO60840 1977 aa9.38□□□□□ -0.91
GABRE-201ENST00000370328 CYP2E1P05181 493 aaPredicted RBP9.38□□□□□ -0.91
GABRE-201ENST00000370328 MX1P20591 662 aa9.38□□□□□ -0.91
GABRE-201ENST00000370328 ARID4AP29374 1257 aaPredicted RBP9.38□□□□□ -0.91
GABRE-201ENST00000370328 RBM25P49756 843 aaKnown RBP9.38□□□□□ -0.91
GABRE-201ENST00000370328 MKRN3Q13064 507 aaKnown RBP9.38□□□□□ -0.91
GABRE-201ENST00000370328 TTLL12Q14166 644 aaPredicted RBP9.38□□□□□ -0.91
GABRE-201ENST00000370328 SLC9C2Q5TAH2 1124 aa9.38□□□□□ -0.91
GABRE-201ENST00000370328 ANGEL2Q5VTE6 544 aaKnown RBP9.38□□□□□ -0.91
GABRE-201ENST00000370328 RSBN1LQ6PCB5 846 aaPredicted RBP9.38□□□□□ -0.91
GABRE-201ENST00000370328 FBXO33Q7Z6M2 555 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms