RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 SH3GL1Q99961 368 aa5.66□□□□□ -1.5
RC3H1-202ENST00000367694 KIF9Q9HAQ2 790 aa5.66□□□□□ -1.5
RC3H1-202ENST00000367694 CASS4Q9NQ75 786 aa5.66□□□□□ -1.5
RC3H1-202ENST00000367694 DDX21Q9NR30 783 aaKnown RBP eCLIP5.66□□□□□ -1.5
RC3H1-202ENST00000367694 CHPF2Q9P2E5 772 aa5.66□□□□□ -1.5
RC3H1-202ENST00000367694 NUP160Q12769 1436 aa5.66□□□□□ -1.5
RC3H1-202ENST00000367694 FMN1Q68DA7 1419 aa5.66□□□□□ -1.5
RC3H1-202ENST00000367694 PCF11O94913 1555 aaKnown RBP5.65□□□□□ -1.5
RC3H1-202ENST00000367694 TTI1O43156 1089 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 ATP6V1G1O75348 118 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 IL4RP24394 825 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 CCNCP24863 283 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 MAP3K9P80192 1104 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 COX10Q12887 443 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 ALDH1L2Q3SY69 923 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 CCDC14Q49A88 953 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 RRP12Q5JTH9 1297 aaKnown RBP5.65□□□□□ -1.5
RC3H1-202ENST00000367694 CREB3L3Q68CJ9 461 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 ATF7IPQ6VMQ6 1270 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 RTF1Q92541 710 aaKnown RBP5.65□□□□□ -1.5
RC3H1-202ENST00000367694 PPP2R3CQ969Q6 453 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 CDHR1Q96JP9 859 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 CAPS2Q9BXY5 557 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 INCENPQ9NQS7 918 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 EIF3AQ14152 1382 aaKnown RBP5.65□□□□□ -1.5
RC3H1-202ENST00000367694 LAMC1P11047 1609 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 HFM1A2PYH4 1435 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 A6NJR5 290 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 ERC2O15083 957 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 RNF8O76064 485 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 PAPOLAP51003 745 aaKnown RBP5.65□□□□□ -1.5
RC3H1-202ENST00000367694 GPS2Q13227 327 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 MAPRE1Q15691 268 aaKnown RBP5.65□□□□□ -1.5
RC3H1-202ENST00000367694 DDB1Q16531 1140 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 BCL2A1Q16548 175 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 GNPTABQ3T906 1256 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 CCDC122Q5T0U0 273 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 FBXO38Q6PIJ6 1188 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 TEKT4Q8WW24 435 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 MPP4Q96JB8 637 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 NEUROD6Q96NK8 337 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 CCDC68Q9H2F9 335 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 HDAC6Q9UBN7 1215 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 SEL1LQ9UBV2 794 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 BIN2Q9UBW5 565 aaPredicted RBP5.65□□□□□ -1.5
RC3H1-202ENST00000367694 TMED5Q9Y3A6 229 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 IKBKGQ9Y6K9 419 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 DISP1Q96F81 1524 aa5.65□□□□□ -1.5
RC3H1-202ENST00000367694 NPATQ14207 1427 aa5.65□□□□□ -1.51
RC3H1-202ENST00000367694 ZEB2O60315 1214 aa5.65□□□□□ -1.51
RC3H1-202ENST00000367694 CDR1P51861 262 aa5.65□□□□□ -1.51
RC3H1-202ENST00000367694 PLEKHO1Q53GL0 409 aaPredicted RBP5.65□□□□□ -1.51
RC3H1-202ENST00000367694 LMOD2Q6P5Q4 547 aa5.65□□□□□ -1.51
RC3H1-202ENST00000367694 BRSK2Q8IWQ3 736 aa5.65□□□□□ -1.51
RC3H1-202ENST00000367694 LSMEM2Q8N112 164 aa5.65□□□□□ -1.51
RC3H1-202ENST00000367694 LILRB2Q8N423 598 aa5.65□□□□□ -1.51
RC3H1-202ENST00000367694 ESX1Q8N693 406 aa5.65□□□□□ -1.51
RC3H1-202ENST00000367694 CCDC150Q8NCX0 1101 aa5.65□□□□□ -1.51
RC3H1-202ENST00000367694 USP33Q8TEY7 942 aa5.65□□□□□ -1.51
RC3H1-202ENST00000367694 N4BP2L2Q92802 583 aaPredicted RBP5.65□□□□□ -1.51
RC3H1-202ENST00000367694 CUL5Q93034 780 aa5.65□□□□□ -1.51
RC3H1-202ENST00000367694 MRFAP1L1Q96HT8 127 aa5.65□□□□□ -1.51
RC3H1-202ENST00000367694 USP26Q9BXU7 913 aa5.65□□□□□ -1.51
RC3H1-202ENST00000367694 ATP10AO60312 1499 aa5.65□□□□□ -1.51
RC3H1-202ENST00000367694 FAM177BA6PVY3 158 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 HIP1RO75146 1068 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 CSB-PGBD3P0DP91 1061 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 ST5P78524 1137 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 TMEM62Q0P6H9 643 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 USP4Q13107 963 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 CAMK2BQ13554 666 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 ARL10Q8N8L6 244 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 NGDNQ8NEJ9 315 aaKnown RBP5.64□□□□□ -1.51
RC3H1-202ENST00000367694 SAAL1Q96ER3 474 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 TMEM165Q9HC07 324 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 GRIN2BQ13224 1484 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 GLI2P10070 1586 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 FYCO1Q9BQS8 1478 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 CCDC7Q96M83 1385 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 TMEM232C9JQI7 657 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 SART1O43290 800 aaKnown RBP5.64□□□□□ -1.51
RC3H1-202ENST00000367694 PNMA6AP0CW24 399 aaPredicted RBP5.64□□□□□ -1.51
RC3H1-202ENST00000367694 PEX5P50542 639 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 KCTD2Q14681 263 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 COG2Q14746 738 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 MSL1Q68DK7 614 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 IFNLR1Q8IU57 520 aaPredicted RBP5.64□□□□□ -1.51
RC3H1-202ENST00000367694 CCDC170Q8IYT3 715 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 NDUFAF2Q8N183 169 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 L3MBTL2Q969R5 705 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 ALS2CR12Q96Q35 445 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 IWS1Q96ST2 819 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 OXCT2Q9BYC2 517 aaPredicted RBP5.64□□□□□ -1.51
RC3H1-202ENST00000367694 PCDH18Q9HCL0 1135 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 C6orf203Q9P0P8 240 aaPredicted RBP5.64□□□□□ -1.51
RC3H1-202ENST00000367694 HESX1Q9UBX0 185 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 ANKRD36BQ8N2N9 1353 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 CHUKO15111 745 aa5.64□□□□□ -1.51
RC3H1-202ENST00000367694 ONECUT3O60422 494 aaPredicted RBP5.64□□□□□ -1.51
RC3H1-202ENST00000367694 ATG7O95352 703 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms