RNA–Protein interactions for RNA: ENST00000366794.9

PARP1-203, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-203ENST00000366794 ZNF827Q17R98 1081 aa16.36■□□□□ 0.21
PARP1-203ENST00000366794 SPATA31A3Q5VYP0 1347 aa16.36■□□□□ 0.21
PARP1-203ENST00000366794 AGLP35573 1532 aa16.36■□□□□ 0.21
PARP1-203ENST00000366794 SPATA31D1Q6ZQQ2 1576 aa16.36■□□□□ 0.21
PARP1-203ENST00000366794 TRIM34Q9BYJ4 488 aa16.36■□□□□ 0.21
PARP1-203ENST00000366794 ANGEL1Q9UNK9 670 aaKnown RBP16.36■□□□□ 0.21
PARP1-203ENST00000366794 ADGRB2O60241 1585 aa16.36■□□□□ 0.21
PARP1-203ENST00000366794 GNPATO15228 680 aa16.36■□□□□ 0.21
PARP1-203ENST00000366794 COBLO75128 1261 aa16.36■□□□□ 0.21
PARP1-203ENST00000366794 NSUN7Q8NE18 718 aaKnown RBP16.36■□□□□ 0.21
PARP1-203ENST00000366794 DENND2AQ9ULE3 1009 aa16.36■□□□□ 0.21
PARP1-203ENST00000366794 HEG1Q9ULI3 1381 aa16.35■□□□□ 0.21
PARP1-203ENST00000366794 RRP9O43818 475 aaKnown RBP16.35■□□□□ 0.21
PARP1-203ENST00000366794 KRT40Q6A162 431 aa16.35■□□□□ 0.21
PARP1-203ENST00000366794 CATIPQ7Z7H3 387 aa16.35■□□□□ 0.21
PARP1-203ENST00000366794 CLSTN2Q9H4D0 955 aa16.35■□□□□ 0.21
PARP1-203ENST00000366794 MPHOSPH10O00566 681 aaKnown RBP16.35■□□□□ 0.21
PARP1-203ENST00000366794 TOP1P11387 765 aaKnown RBP16.35■□□□□ 0.21
PARP1-203ENST00000366794 FAM47AQ5JRC9 791 aa16.35■□□□□ 0.21
PARP1-203ENST00000366794 IFIT1BQ5T764 474 aaKnown RBP16.35■□□□□ 0.21
PARP1-203ENST00000366794 AATFQ9NY61 560 aaKnown RBP eCLIP16.35■□□□□ 0.21
PARP1-203ENST00000366794 ZMYM1Q5SVZ6 1142 aa16.35■□□□□ 0.21
PARP1-203ENST00000366794 SPATA5Q8NB90 893 aa16.35■□□□□ 0.21
PARP1-203ENST00000366794 SETDB2Q96T68 719 aa16.35■□□□□ 0.21
PARP1-203ENST00000366794 DIP2AQ14689 1571 aa16.35■□□□□ 0.21
PARP1-203ENST00000366794 MAGEB6P1A0A0J9YX57 407 aa16.34■□□□□ 0.21
PARP1-203ENST00000366794 ERCC3P19447 782 aa16.34■□□□□ 0.21
PARP1-203ENST00000366794 ZBTB38Q8NAP3 1195 aaPredicted RBP16.34■□□□□ 0.21
PARP1-203ENST00000366794 ANKRD20A12PQ8NF67 263 aa16.34■□□□□ 0.21
PARP1-203ENST00000366794 MCM9Q9NXL9 1143 aa16.34■□□□□ 0.21
PARP1-203ENST00000366794 PPP1R1BQ9UD71 204 aaPredicted RBP16.34■□□□□ 0.21
PARP1-203ENST00000366794 TECPR2O15040 1411 aa16.34■□□□□ 0.21
PARP1-203ENST00000366794 ARID5BQ14865 1188 aa16.34■□□□□ 0.21
PARP1-203ENST00000366794 TRMT44Q8IYL2 757 aaKnown RBP16.34■□□□□ 0.21
PARP1-203ENST00000366794 SAP30BPQ9UHR5 308 aaKnown RBP16.34■□□□□ 0.21
PARP1-203ENST00000366794 H7C1W4 665 aa16.34■□□□□ 0.21
PARP1-203ENST00000366794 NAP1L1P55209 391 aaKnown RBP16.34■□□□□ 0.21
PARP1-203ENST00000366794 UBASH3AP57075 661 aa16.34■□□□□ 0.21
PARP1-203ENST00000366794 PUM3Q15397 648 aaKnown RBP16.34■□□□□ 0.21
PARP1-203ENST00000366794 ZNF174Q15697 407 aa16.34■□□□□ 0.21
PARP1-203ENST00000366794 ENOX2Q16206 610 aaKnown RBP16.34■□□□□ 0.21
PARP1-203ENST00000366794 PPP4R3BQ5MIZ7 849 aa16.34■□□□□ 0.21
PARP1-203ENST00000366794 EEF2KMTQ96G04 330 aa16.34■□□□□ 0.21
PARP1-203ENST00000366794 V9GY48 417 aaPredicted RBP16.34■□□□□ 0.21
PARP1-203ENST00000366794 CTAGE5O15320 804 aa16.33■□□□□ 0.21
PARP1-203ENST00000366794 GIGYF2Q6Y7W6 1299 aaKnown RBP16.33■□□□□ 0.21
PARP1-203ENST00000366794 NLRP3Q96P20 1036 aa16.33■□□□□ 0.21
PARP1-203ENST00000366794 PXDNQ92626 1479 aa16.33■□□□□ 0.2
PARP1-203ENST00000366794 ANKARQ7Z5J8 1434 aa16.33■□□□□ 0.2
PARP1-203ENST00000366794 FAM160A1Q05DH4 1040 aa16.33■□□□□ 0.2
PARP1-203ENST00000366794 GOLGA8FQ08AF8 430 aa16.33■□□□□ 0.2
PARP1-203ENST00000366794 GOLGA8DPQ0D2H9 430 aa16.33■□□□□ 0.2
PARP1-203ENST00000366794 NLRP10Q86W26 655 aa16.33■□□□□ 0.2
PARP1-203ENST00000366794 DIS3L2Q8IYB7 885 aaKnown RBP16.33■□□□□ 0.2
PARP1-203ENST00000366794 KCNG4Q8TDN1 519 aa16.33■□□□□ 0.2
PARP1-203ENST00000366794 PCDHA7Q9UN72 937 aa16.33■□□□□ 0.2
PARP1-203ENST00000366794 RFC4P35249 363 aa16.33■□□□□ 0.2
PARP1-203ENST00000366794 MCAMP43121 646 aa16.33■□□□□ 0.2
PARP1-203ENST00000366794 PICALMQ13492 652 aa16.33■□□□□ 0.2
PARP1-203ENST00000366794 ANO1Q5XXA6 986 aa16.33■□□□□ 0.2
PARP1-203ENST00000366794 PPFIBP1Q86W92 1011 aa16.33■□□□□ 0.2
PARP1-203ENST00000366794 PIH1D3Q9NQM4 214 aaKnown RBP16.33■□□□□ 0.2
PARP1-203ENST00000366794 VPS54Q9P1Q0 977 aa16.33■□□□□ 0.2
PARP1-203ENST00000366794 BTBD18B2RXH4 712 aa16.32■□□□□ 0.2
PARP1-203ENST00000366794 C11orf57Q6ZUT1 292 aaPredicted RBP16.32■□□□□ 0.2
PARP1-203ENST00000366794 RNF216Q9NWF9 866 aaPredicted RBP16.32■□□□□ 0.2
PARP1-203ENST00000366794 MRVI1Q9Y6F6 885 aa16.32■□□□□ 0.2
PARP1-203ENST00000366794 RIMBP2O15034 1052 aa16.32■□□□□ 0.2
PARP1-203ENST00000366794 ZNF202O95125 648 aa16.32■□□□□ 0.2
PARP1-203ENST00000366794 NDUFA8P51970 172 aa16.32■□□□□ 0.2
PARP1-203ENST00000366794 EIF6P56537 245 aaKnown RBP16.32■□□□□ 0.2
PARP1-203ENST00000366794 ZNF444Q8N0Y2 327 aaPredicted RBP16.32■□□□□ 0.2
PARP1-203ENST00000366794 PGBD1Q96JS3 809 aa16.32■□□□□ 0.2
PARP1-203ENST00000366794 DSCC1Q9BVC3 393 aa16.32■□□□□ 0.2
PARP1-203ENST00000366794 SALL3Q9BXA9 1300 aa16.32■□□□□ 0.2
PARP1-203ENST00000366794 LMTK3Q96Q04 1460 aa16.32■□□□□ 0.2
PARP1-203ENST00000366794 CCDC196A0A1B0GTZ2 297 aa16.32■□□□□ 0.2
PARP1-203ENST00000366794 SMTNL1A8MU46 457 aa16.32■□□□□ 0.2
PARP1-203ENST00000366794 RNF41Q9H4P4 317 aaPredicted RBP16.32■□□□□ 0.2
PARP1-203ENST00000366794 RIMS1Q86UR5 1692 aaKnown RBP16.31■□□□□ 0.2
PARP1-203ENST00000366794 PFKFB2O60825 505 aa16.31■□□□□ 0.2
PARP1-203ENST00000366794 PDE8BO95263 885 aa16.31■□□□□ 0.2
PARP1-203ENST00000366794 FOXO4P98177 505 aa16.31■□□□□ 0.2
PARP1-203ENST00000366794 WASF1Q92558 559 aa16.31■□□□□ 0.2
PARP1-203ENST00000366794 ESR2Q92731 530 aa16.31■□□□□ 0.2
PARP1-203ENST00000366794 CCDC87Q9NVE4 849 aa16.31■□□□□ 0.2
PARP1-203ENST00000366794 CEMIPQ8WUJ3 1361 aa16.31■□□□□ 0.2
PARP1-203ENST00000366794 PCCAP05165 728 aaPredicted RBP16.31■□□□□ 0.2
PARP1-203ENST00000366794 MYSM1Q5VVJ2 828 aa16.31■□□□□ 0.2
PARP1-203ENST00000366794 ATG9AQ7Z3C6 839 aa16.31■□□□□ 0.2
PARP1-203ENST00000366794 TTLL11Q8NHH1 800 aa16.31■□□□□ 0.2
PARP1-203ENST00000366794 CARD10Q9BWT7 1032 aa16.31■□□□□ 0.2
PARP1-203ENST00000366794 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.31■□□□□ 0.24e-8■■■□□ 15.8
PARP1-203ENST00000366794 MAP3K15Q6ZN16 1313 aa16.31■□□□□ 0.2
PARP1-203ENST00000366794 PDIA4P13667 645 aaKnown RBP16.31■□□□□ 0.2
PARP1-203ENST00000366794 MCM7P33993 719 aa16.31■□□□□ 0.2
PARP1-203ENST00000366794 DNA2P51530 1060 aa16.31■□□□□ 0.2
PARP1-203ENST00000366794 PNOCQ13519 176 aa16.31■□□□□ 0.2
PARP1-203ENST00000366794 LPIN2Q92539 896 aa16.31■□□□□ 0.2
PARP1-203ENST00000366794 KCNQ2O43526 872 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms