RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 SMC4Q9NTJ3 1288 aa10.26□□□□□ -0.77
RNU4-59P-201ENST00000364447 ZNF70Q9UC06 446 aaPredicted RBP10.26□□□□□ -0.77
RNU4-59P-201ENST00000364447 HPS5Q9UPZ3 1129 aa10.26□□□□□ -0.77
RNU4-59P-201ENST00000364447 AOX1Q06278 1338 aa10.26□□□□□ -0.77
RNU4-59P-201ENST00000364447 TCP10L2B9ZVM9 353 aa10.25□□□□□ -0.77
RNU4-59P-201ENST00000364447 PDE8BO95263 885 aa10.25□□□□□ -0.77
RNU4-59P-201ENST00000364447 IFIT1P09914 478 aaKnown RBP10.25□□□□□ -0.77
RNU4-59P-201ENST00000364447 PUM3Q15397 648 aaKnown RBP10.25□□□□□ -0.77
RNU4-59P-201ENST00000364447 OTUD7BQ6GQQ9 843 aa10.25□□□□□ -0.77
RNU4-59P-201ENST00000364447 FBXO33Q7Z6M2 555 aa10.25□□□□□ -0.77
RNU4-59P-201ENST00000364447 KLHDC4Q8TBB5 520 aa10.25□□□□□ -0.77
RNU4-59P-201ENST00000364447 TEKT1Q969V4 418 aa10.25□□□□□ -0.77
RNU4-59P-201ENST00000364447 USP44Q9H0E7 712 aa10.25□□□□□ -0.77
RNU4-59P-201ENST00000364447 MAST3O60307 1309 aa10.25□□□□□ -0.77
RNU4-59P-201ENST00000364447 USP2O75604 605 aaPredicted RBP10.24□□□□□ -0.77
RNU4-59P-201ENST00000364447 BCAMP50895 628 aa10.24□□□□□ -0.77
RNU4-59P-201ENST00000364447 SLFN5Q08AF3 891 aa10.24□□□□□ -0.77
RNU4-59P-201ENST00000364447 ALDH1L2Q3SY69 923 aa10.24□□□□□ -0.77
RNU4-59P-201ENST00000364447 FBXO46Q6PJ61 603 aaPredicted RBP10.24□□□□□ -0.77
RNU4-59P-201ENST00000364447 VGLL2Q8N8G2 317 aa10.24□□□□□ -0.77
RNU4-59P-201ENST00000364447 OPTNQ96CV9 577 aa10.24□□□□□ -0.77
RNU4-59P-201ENST00000364447 R3HDMLQ9H3Y0 253 aa10.24□□□□□ -0.77
RNU4-59P-201ENST00000364447 TMOD2Q9NZR1 351 aa10.24□□□□□ -0.77
RNU4-59P-201ENST00000364447 PDE4DIPQ5VU43 2346 aa10.23□□□□□ -0.77
RNU4-59P-201ENST00000364447 IGF2BP3O00425 579 aaKnown RBP eCLIP10.23□□□□□ -0.77
RNU4-59P-201ENST00000364447 UBTFL1P0CB47 393 aaPredicted RBP10.23□□□□□ -0.77
RNU4-59P-201ENST00000364447 SLC5A1P13866 664 aa10.23□□□□□ -0.77
RNU4-59P-201ENST00000364447 HDLBPQ00341 1268 aaKnown RBP10.23□□□□□ -0.77
RNU4-59P-201ENST00000364447 TMEM39BQ9GZU3 492 aa10.23□□□□□ -0.77
RNU4-59P-201ENST00000364447 ELP3Q9H9T3 547 aa10.23□□□□□ -0.77
RNU4-59P-201ENST00000364447 CSADQ9Y600 493 aa10.23□□□□□ -0.77
RNU4-59P-201ENST00000364447 KIF16BQ96L93 1317 aa10.23□□□□□ -0.77
RNU4-59P-201ENST00000364447 EYA2O00167 538 aa10.22□□□□□ -0.77
RNU4-59P-201ENST00000364447 GJA5P36382 358 aa10.22□□□□□ -0.77
RNU4-59P-201ENST00000364447 CACNB3P54284 484 aa10.22□□□□□ -0.77
RNU4-59P-201ENST00000364447 GRIK5Q16478 980 aa10.22□□□□□ -0.77
RNU4-59P-201ENST00000364447 CDAN1Q8IWY9 1227 aa10.22□□□□□ -0.77
RNU4-59P-201ENST00000364447 HOOK2Q96ED9 719 aa10.22□□□□□ -0.77
RNU4-59P-201ENST00000364447 CDCA7LQ96GN5 454 aa10.22□□□□□ -0.77
RNU4-59P-201ENST00000364447 ERO1AQ96HE7 468 aa10.22□□□□□ -0.77
RNU4-59P-201ENST00000364447 ZDHHC15Q96MV8 337 aa10.22□□□□□ -0.77
RNU4-59P-201ENST00000364447 TEPSINQ96N21 525 aa10.22□□□□□ -0.77
RNU4-59P-201ENST00000364447 SUGT1Q9Y2Z0 365 aa10.22□□□□□ -0.77
RNU4-59P-201ENST00000364447 TRIM17Q9Y577 477 aa10.22□□□□□ -0.77
RNU4-59P-201ENST00000364447 AK9Q5TCS8 1911 aa10.22□□□□□ -0.77
RNU4-59P-201ENST00000364447 FGFR2P21802 821 aa10.21□□□□□ -0.77
RNU4-59P-201ENST00000364447 CRHR2Q13324 411 aa10.21□□□□□ -0.77
RNU4-59P-201ENST00000364447 VGLL4Q14135 290 aa10.21□□□□□ -0.77
RNU4-59P-201ENST00000364447 OTOP1Q7RTM1 612 aa10.21□□□□□ -0.77
RNU4-59P-201ENST00000364447 WDR66Q8TBY9 1149 aa10.21□□□□□ -0.77
RNU4-59P-201ENST00000364447 LPIN2Q92539 896 aa10.21□□□□□ -0.77
RNU4-59P-201ENST00000364447 SIL1Q9H173 461 aa10.21□□□□□ -0.77
RNU4-59P-201ENST00000364447 HDAC5Q9UQL6 1122 aa10.21□□□□□ -0.77
RNU4-59P-201ENST00000364447 CCL15-CCL14A0A0B4J2E2 113 aa10.2□□□□□ -0.78
RNU4-59P-201ENST00000364447 TESPA1A2RU30 521 aaPredicted RBP10.2□□□□□ -0.78
RNU4-59P-201ENST00000364447 TNRC18O15417 2968 aaPredicted RBP10.2□□□□□ -0.78
RNU4-59P-201ENST00000364447 CT47B1P0C2W7 299 aaPredicted RBP10.2□□□□□ -0.78
RNU4-59P-201ENST00000364447 RFX5P48382 616 aaPredicted RBP10.2□□□□□ -0.78
RNU4-59P-201ENST00000364447 GTF2A2P52657 109 aa10.2□□□□□ -0.78
RNU4-59P-201ENST00000364447 MAP3K9P80192 1104 aa10.2□□□□□ -0.78
RNU4-59P-201ENST00000364447 CCL15Q16663 113 aa10.2□□□□□ -0.78
RNU4-59P-201ENST00000364447 ATP2B3Q16720 1220 aa10.2□□□□□ -0.78
RNU4-59P-201ENST00000364447 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.2□□□□□ -0.78
RNU4-59P-201ENST00000364447 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.2□□□□□ -0.78
RNU4-59P-201ENST00000364447 CD99L2Q8TCZ2 262 aa10.2□□□□□ -0.78
RNU4-59P-201ENST00000364447 OTUD5Q96G74 571 aa10.2□□□□□ -0.78
RNU4-59P-201ENST00000364447 WRNIP1Q96S55 665 aa10.2□□□□□ -0.78
RNU4-59P-201ENST00000364447 MRIQ9BWK5 157 aa10.2□□□□□ -0.78
RNU4-59P-201ENST00000364447 API5Q9BZZ5 524 aaKnown RBP10.2□□□□□ -0.78
RNU4-59P-201ENST00000364447 CEP126Q9P2H0 1117 aa10.2□□□□□ -0.78
RNU4-59P-201ENST00000364447 RPAP1Q9BWH6 1393 aaPredicted RBP10.19□□□□□ -0.78
RNU4-59P-201ENST00000364447 WDHD1O75717 1129 aaPredicted RBP10.19□□□□□ -0.78
RNU4-59P-201ENST00000364447 CIAO1O76071 339 aa10.19□□□□□ -0.78
RNU4-59P-201ENST00000364447 SP3Q02447 781 aa10.19□□□□□ -0.78
RNU4-59P-201ENST00000364447 MAPK8IP2Q13387 824 aaPredicted RBP10.19□□□□□ -0.78
RNU4-59P-201ENST00000364447 TAF1CQ15572 869 aaPredicted RBP10.19□□□□□ -0.78
RNU4-59P-201ENST00000364447 FKBP1CQ5VVH2 108 aa10.19□□□□□ -0.78
RNU4-59P-201ENST00000364447 DCAF15Q66K64 600 aa10.19□□□□□ -0.78
RNU4-59P-201ENST00000364447 HHIPL2Q6UWX4 724 aa10.19□□□□□ -0.78
RNU4-59P-201ENST00000364447 ATG9AQ7Z3C6 839 aa10.19□□□□□ -0.78
RNU4-59P-201ENST00000364447 FAM83AQ86UY5 434 aa10.19□□□□□ -0.78
RNU4-59P-201ENST00000364447 CNKSR2Q8WXI2 1034 aa10.19□□□□□ -0.78
RNU4-59P-201ENST00000364447 PTPN18Q99952 460 aa10.19□□□□□ -0.78
RNU4-59P-201ENST00000364447 GNL3LQ9NVN8 582 aaKnown RBP10.19□□□□□ -0.78
RNU4-59P-201ENST00000364447 FBXO3Q9UK99 471 aa10.19□□□□□ -0.78
RNU4-59P-201ENST00000364447 NOB1Q9ULX3 412 aaKnown RBP10.19□□□□□ -0.78
RNU4-59P-201ENST00000364447 RBBP6Q7Z6E9 1792 aaKnown RBP10.19□□□□□ -0.78
RNU4-59P-201ENST00000364447 MYH2Q9UKX2 1941 aa10.18□□□□□ -0.78
RNU4-59P-201ENST00000364447 SPDYE5A6NIY4 337 aa10.18□□□□□ -0.78
RNU4-59P-201ENST00000364447 SLC34A2O95436 690 aa10.18□□□□□ -0.78
RNU4-59P-201ENST00000364447 LDHBP07195 334 aaKnown RBP10.18□□□□□ -0.78
RNU4-59P-201ENST00000364447 ARHGEF6Q15052 776 aa10.18□□□□□ -0.78
RNU4-59P-201ENST00000364447 APOBEC3HQ6NTF7 200 aaKnown RBP10.18□□□□□ -0.78
RNU4-59P-201ENST00000364447 ERO1BQ86YB8 467 aa10.18□□□□□ -0.78
RNU4-59P-201ENST00000364447 TRMT2AQ8IZ69 625 aaKnown RBP10.18□□□□□ -0.78
RNU4-59P-201ENST00000364447 BRI3BPQ8WY22 251 aa10.18□□□□□ -0.78
RNU4-59P-201ENST00000364447 MS4A4AQ96JQ5 239 aa10.18□□□□□ -0.78
RNU4-59P-201ENST00000364447 EFCC1Q9HA90 598 aa10.18□□□□□ -0.78
RNU4-59P-201ENST00000364447 ZFYVE28Q9HCC9 887 aa10.18□□□□□ -0.78
RNU4-59P-201ENST00000364447 PTPN22Q9Y2R2 807 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms