RNA–Protein interactions for RNA: ENST00000360016.9

BRD4-202, Transcript of bromodomain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD4, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-202ENST00000360016 NBPF3Q9H094 633 aa23.78■■□□□ 1.4
BRD4-202ENST00000360016 GTF2E1P29083 439 aaPredicted RBP23.78■■□□□ 1.4
BRD4-202ENST00000360016 ANTXR2P58335 489 aa23.78■■□□□ 1.4
BRD4-202ENST00000360016 ELP1O95163 1332 aa23.78■■□□□ 1.4
BRD4-202ENST00000360016 TSPY26PQ9H489 355 aa23.78■■□□□ 1.4
BRD4-202ENST00000360016 WDR19Q8NEZ3 1342 aa23.77■■□□□ 1.4
BRD4-202ENST00000360016 RESTQ13127 1097 aa23.77■■□□□ 1.4
BRD4-202ENST00000360016 PPP1R9BQ96SB3 815 aa23.77■■□□□ 1.4
BRD4-202ENST00000360016 SRP68Q9UHB9 627 aaKnown RBP23.77■■□□□ 1.4
BRD4-202ENST00000360016 CCNL1Q9UK58 526 aaPredicted RBP23.77■■□□□ 1.4
BRD4-202ENST00000360016 KIF3AQ9Y496 699 aa23.77■■□□□ 1.4
BRD4-202ENST00000360016 CASZ1Q86V15 1759 aa23.77■■□□□ 1.4
BRD4-202ENST00000360016 SALL1Q9NSC2 1324 aa23.77■■□□□ 1.4
BRD4-202ENST00000360016 GNPATO15228 680 aa23.77■■□□□ 1.4
BRD4-202ENST00000360016 BSDC1Q9NW68 430 aaPredicted RBP23.77■■□□□ 1.4
BRD4-202ENST00000360016 SCAND2PQ9GZW5 306 aaPredicted RBP23.76■■□□□ 1.39
BRD4-202ENST00000360016 ALX1Q15699 326 aa23.76■■□□□ 1.39
BRD4-202ENST00000360016 ZSCAN16Q9H4T2 348 aaPredicted RBP23.76■■□□□ 1.39
BRD4-202ENST00000360016 LETM1O95202 739 aaPredicted RBP23.76■■□□□ 1.39
BRD4-202ENST00000360016 TRDNQ13061 729 aa23.76■■□□□ 1.39
BRD4-202ENST00000360016 NYXQ9GZU5 481 aa23.76■■□□□ 1.39
BRD4-202ENST00000360016 ZPR1O75312 459 aa23.75■■□□□ 1.39
BRD4-202ENST00000360016 NAA16Q6N069 864 aaPredicted RBP23.75■■□□□ 1.39
BRD4-202ENST00000360016 TBC1D10CQ8IV04 446 aa23.75■■□□□ 1.39
BRD4-202ENST00000360016 SETDB2Q96T68 719 aa23.75■■□□□ 1.39
BRD4-202ENST00000360016 TFIP11Q9UBB9 837 aaKnown RBP23.75■■□□□ 1.39
BRD4-202ENST00000360016 PATL2C9JE40 543 aaKnown RBP23.75■■□□□ 1.39
BRD4-202ENST00000360016 MBD4O95243 580 aa23.75■■□□□ 1.39
BRD4-202ENST00000360016 TAF1P21675 1872 aa23.75■■□□□ 1.39
BRD4-202ENST00000360016 TAOK2Q9UL54 1235 aa23.74■■□□□ 1.39
BRD4-202ENST00000360016 GJD4Q96KN9 370 aaPredicted RBP23.74■■□□□ 1.39
BRD4-202ENST00000360016 RTCBQ9Y3I0 505 aaKnown RBP23.74■■□□□ 1.39
BRD4-202ENST00000360016 A0A1B0GUL6 1792 aa23.74■■□□□ 1.39
BRD4-202ENST00000360016 KLF18A0A0U1RQI7 1052 aa23.74■■□□□ 1.39
BRD4-202ENST00000360016 UBE4AQ14139 1066 aa23.74■■□□□ 1.39
BRD4-202ENST00000360016 ZMYM6O95789 1325 aa23.74■■□□□ 1.39
BRD4-202ENST00000360016 SPATA32Q96LK8 384 aa23.73■■□□□ 1.39
BRD4-202ENST00000360016 ARMT1Q9H993 441 aa23.73■■□□□ 1.39
BRD4-202ENST00000360016 MINPP1Q9UNW1 487 aa23.73■■□□□ 1.39
BRD4-202ENST00000360016 ZNF804BA4D1E1 1349 aa23.73■■□□□ 1.39
BRD4-202ENST00000360016 IFNL3Q8IZI9 196 aa23.73■■□□□ 1.39
BRD4-202ENST00000360016 CELF1Q92879 486 aaKnown RBP23.73■■□□□ 1.39
BRD4-202ENST00000360016 DENND2AQ9ULE3 1009 aa23.73■■□□□ 1.39
BRD4-202ENST00000360016 NBPF5PQ86XG9 351 aaPredicted RBP23.72■■□□□ 1.39
BRD4-202ENST00000360016 LEO1Q8WVC0 666 aaPredicted RBP23.72■■□□□ 1.39
BRD4-202ENST00000360016 MEX3CQ5U5Q3 659 aaKnown RBP23.72■■□□□ 1.39
BRD4-202ENST00000360016 EPB41L4AQ9HCS5 686 aaPredicted RBP23.72■■□□□ 1.39
BRD4-202ENST00000360016 LRP2BPQ9P2M1 347 aa23.72■■□□□ 1.39
BRD4-202ENST00000360016 HPS5Q9UPZ3 1129 aa23.72■■□□□ 1.39
BRD4-202ENST00000360016 IQSEC3Q9UPP2 1182 aaPredicted RBP23.72■■□□□ 1.39
BRD4-202ENST00000360016 COL24A1Q17RW2 1714 aa23.71■■□□□ 1.39
BRD4-202ENST00000360016 GYG1P46976 350 aa23.71■■□□□ 1.39
BRD4-202ENST00000360016 FOSBP53539 338 aa23.71■■□□□ 1.39
BRD4-202ENST00000360016 NLRP3Q96P20 1036 aa23.71■■□□□ 1.39
BRD4-202ENST00000360016 GNL3LQ9NVN8 582 aaKnown RBP23.71■■□□□ 1.39
BRD4-202ENST00000360016 WTIPA6NIX2 430 aaPredicted RBP23.71■■□□□ 1.39
BRD4-202ENST00000360016 GOLGA8BA8MQT2 603 aa23.71■■□□□ 1.39
BRD4-202ENST00000360016 CYB5R4Q7L1T6 521 aa23.71■■□□□ 1.39
BRD4-202ENST00000360016 ZSCAN30Q86W11 494 aa23.71■■□□□ 1.39
BRD4-202ENST00000360016 NAPBQ9H115 298 aa23.71■■□□□ 1.39
BRD4-202ENST00000360016 UQCRHLA0A096LP55 91 aa23.71■■□□□ 1.39
BRD4-202ENST00000360016 RRP9O43818 475 aaKnown RBP23.71■■□□□ 1.39
BRD4-202ENST00000360016 DHX16O60231 1041 aaKnown RBP23.71■■□□□ 1.39
BRD4-202ENST00000360016 PPFIA3O75145 1194 aa23.71■■□□□ 1.39
BRD4-202ENST00000360016 UQCRHP07919 91 aa23.71■■□□□ 1.39
BRD4-202ENST00000360016 AMIGO3Q86WK7 504 aa23.71■■□□□ 1.39
BRD4-202ENST00000360016 ARHGEF1Q92888 912 aaKnown RBP23.71■■□□□ 1.39
BRD4-202ENST00000360016 CARMIL3Q8ND23 1372 aa23.7■■□□□ 1.39
BRD4-202ENST00000360016 FDPSP14324 419 aaKnown RBP23.7■■□□□ 1.38
BRD4-202ENST00000360016 NKX2-3Q8TAU0 364 aa23.7■■□□□ 1.38
BRD4-202ENST00000360016 GSG1L2A8MUP6 293 aa23.7■■□□□ 1.38
BRD4-202ENST00000360016 PNPLA7Q6ZV29 1317 aa23.7■■□□□ 1.38
BRD4-202ENST00000360016 LY75O60449 1722 aa23.7■■□□□ 1.38
BRD4-202ENST00000360016 TPTE2Q6XPS3 522 aa23.69■■□□□ 1.38
BRD4-202ENST00000360016 ANGEL1Q9UNK9 670 aaKnown RBP23.69■■□□□ 1.38
BRD4-202ENST00000360016 TAF1LQ8IZX4 1826 aa23.69■■□□□ 1.38
BRD4-202ENST00000360016 GNAT2P19087 354 aa23.69■■□□□ 1.38
BRD4-202ENST00000360016 LCORLQ8N3X6 602 aa23.69■■□□□ 1.38
BRD4-202ENST00000360016 B4E1Z4 1266 aa23.69■■□□□ 1.38
BRD4-202ENST00000360016 CAVIN4Q5BKX8 364 aa23.69■■□□□ 1.38
BRD4-202ENST00000360016 KLHL34Q8N239 644 aa23.69■■□□□ 1.38
BRD4-202ENST00000360016 CFAP45Q9UL16 551 aa23.69■■□□□ 1.38
BRD4-202ENST00000360016 NEDD4P46934 1319 aa23.68■■□□□ 1.38
BRD4-202ENST00000360016 RPS8P62241 208 aaKnown RBP23.68■■□□□ 1.38
BRD4-202ENST00000360016 GOLGA6L4A6NEF3 574 aa23.68■■□□□ 1.38
BRD4-202ENST00000360016 PRKAB2O43741 272 aa23.68■■□□□ 1.38
BRD4-202ENST00000360016 IGSF3O75054 1194 aa23.68■■□□□ 1.38
BRD4-202ENST00000360016 ZHX1Q9UKY1 873 aaPredicted RBP23.68■■□□□ 1.38
BRD4-202ENST00000360016 AFF2P51816 1311 aa23.67■■□□□ 1.38
BRD4-202ENST00000360016 SH2B2O14492 632 aaPredicted RBP23.67■■□□□ 1.38
BRD4-202ENST00000360016 SLC4A4Q9Y6R1 1079 aa23.67■■□□□ 1.38
BRD4-202ENST00000360016 SBF2Q86WG5 1849 aa23.67■■□□□ 1.38
BRD4-202ENST00000360016 ABCF2Q9UG63 623 aa23.67■■□□□ 1.38
BRD4-202ENST00000360016 ADD1P35611 737 aaKnown RBP23.67■■□□□ 1.38
BRD4-202ENST00000360016 RAB11FIP4Q86YS3 637 aa23.67■■□□□ 1.38
BRD4-202ENST00000360016 PDLIM2Q96JY6 352 aa23.67■■□□□ 1.38
BRD4-202ENST00000360016 FAM84BQ96KN1 310 aaPredicted RBP23.67■■□□□ 1.38
BRD4-202ENST00000360016 NACAP1Q9BZK3 213 aa23.67■■□□□ 1.38
BRD4-202ENST00000360016 ONECUT3O60422 494 aaPredicted RBP23.66■■□□□ 1.38
BRD4-202ENST00000360016 LIG1P18858 919 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms