RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 ERO1AQ96HE7 468 aa10.91□□□□□ -0.66
COL4A3BP-202ENST00000357457 SERPINA10Q9UK55 444 aa10.91□□□□□ -0.66
COL4A3BP-202ENST00000357457 PTPN22Q9Y2R2 807 aa10.91□□□□□ -0.66
COL4A3BP-202ENST00000357457 FANCIQ9NVI1 1328 aa10.9□□□□□ -0.66
COL4A3BP-202ENST00000357457 HAX1O00165 279 aa10.9□□□□□ -0.66
COL4A3BP-202ENST00000357457 CAP1Q01518 475 aa10.9□□□□□ -0.66
COL4A3BP-202ENST00000357457 SP3Q02447 781 aa10.9□□□□□ -0.66
COL4A3BP-202ENST00000357457 UBE4AQ14139 1066 aa10.9□□□□□ -0.66
COL4A3BP-202ENST00000357457 CCDC57Q2TAC2 916 aa10.9□□□□□ -0.66
COL4A3BP-202ENST00000357457 LDHAL6AQ6ZMR3 332 aa10.9□□□□□ -0.66
COL4A3BP-202ENST00000357457 WDR63Q8IWG1 891 aa10.9□□□□□ -0.66
COL4A3BP-202ENST00000357457 MS4A4AQ96JQ5 239 aa10.9□□□□□ -0.66
COL4A3BP-202ENST00000357457 FAM84BQ96KN1 310 aaPredicted RBP10.9□□□□□ -0.66
COL4A3BP-202ENST00000357457 TEPSINQ96N21 525 aa10.9□□□□□ -0.66
COL4A3BP-202ENST00000357457 VEZTQ9HBM0 779 aa10.9□□□□□ -0.66
COL4A3BP-202ENST00000357457 SZT2Q5T011 3432 aa10.89□□□□□ -0.67
COL4A3BP-202ENST00000357457 CEP290O15078 2479 aa10.89□□□□□ -0.67
COL4A3BP-202ENST00000357457 F6X3S4 739 aa10.89□□□□□ -0.67
COL4A3BP-202ENST00000357457 GRM8O00222 908 aa10.89□□□□□ -0.67
COL4A3BP-202ENST00000357457 TNFAIP1Q13829 316 aa10.89□□□□□ -0.67
COL4A3BP-202ENST00000357457 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.89□□□□□ -0.67
COL4A3BP-202ENST00000357457 CD99L2Q8TCZ2 262 aa10.89□□□□□ -0.67
COL4A3BP-202ENST00000357457 ZNF594Q96JF6 807 aaPredicted RBP10.89□□□□□ -0.67
COL4A3BP-202ENST00000357457 EFCC1Q9HA90 598 aa10.89□□□□□ -0.67
COL4A3BP-202ENST00000357457 ZNF70Q9UC06 446 aaPredicted RBP10.89□□□□□ -0.67
COL4A3BP-202ENST00000357457 CHMP3Q9Y3E7 222 aa10.89□□□□□ -0.67
COL4A3BP-202ENST00000357457 OTOFQ9HC10 1997 aa10.88□□□□□ -0.67
COL4A3BP-202ENST00000357457 PLIN1O60240 522 aa10.88□□□□□ -0.67
COL4A3BP-202ENST00000357457 HIBADHP31937 336 aaKnown RBP10.88□□□□□ -0.67
COL4A3BP-202ENST00000357457 RBM5P52756 815 aaKnown RBP eCLIP10.88□□□□□ -0.67
COL4A3BP-202ENST00000357457 MAP3K9P80192 1104 aa10.88□□□□□ -0.67
COL4A3BP-202ENST00000357457 EXOSC9Q06265 439 aaKnown RBP10.88□□□□□ -0.67
COL4A3BP-202ENST00000357457 HABP4Q5JVS0 413 aaKnown RBP10.88□□□□□ -0.67
COL4A3BP-202ENST00000357457 MFSD14BQ5SR56 506 aa10.88□□□□□ -0.67
COL4A3BP-202ENST00000357457 DZIP1LQ8IYY4 767 aaKnown RBP10.88□□□□□ -0.67
COL4A3BP-202ENST00000357457 OPTNQ96CV9 577 aa10.88□□□□□ -0.67
COL4A3BP-202ENST00000357457 CNNM1Q9NRU3 951 aa10.88□□□□□ -0.67
COL4A3BP-202ENST00000357457 TTF2Q9UNY4 1162 aaKnown RBP10.88□□□□□ -0.67
COL4A3BP-202ENST00000357457 JAG2Q9Y219 1238 aa10.88□□□□□ -0.67
COL4A3BP-202ENST00000357457 RIPOR2Q9Y4F9 1068 aa10.88□□□□□ -0.67
COL4A3BP-202ENST00000357457 ALDH1L1O75891 902 aa10.87□□□□□ -0.67
COL4A3BP-202ENST00000357457 HDLBPQ00341 1268 aaKnown RBP10.87□□□□□ -0.67
COL4A3BP-202ENST00000357457 FBXO33Q7Z6M2 555 aa10.87□□□□□ -0.67
COL4A3BP-202ENST00000357457 BRI3BPQ8WY22 251 aa10.87□□□□□ -0.67
COL4A3BP-202ENST00000357457 KAZALD1Q96I82 304 aa10.87□□□□□ -0.67
COL4A3BP-202ENST00000357457 MRIQ9BWK5 157 aa10.87□□□□□ -0.67
COL4A3BP-202ENST00000357457 TDRD3Q9H7E2 651 aaKnown RBP10.87□□□□□ -0.67
COL4A3BP-202ENST00000357457 ELP3Q9H9T3 547 aa10.87□□□□□ -0.67
COL4A3BP-202ENST00000357457 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.87□□□□□ -0.67
COL4A3BP-202ENST00000357457 EN2P19622 333 aaPredicted RBP10.86□□□□□ -0.67
COL4A3BP-202ENST00000357457 GYG1P46976 350 aa10.86□□□□□ -0.67
COL4A3BP-202ENST00000357457 TAF7LQ5H9L4 462 aa10.86□□□□□ -0.67
COL4A3BP-202ENST00000357457 IFNLR1Q8IU57 520 aaPredicted RBP10.86□□□□□ -0.67
COL4A3BP-202ENST00000357457 CDAN1Q8IWY9 1227 aa10.86□□□□□ -0.67
COL4A3BP-202ENST00000357457 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.86□□□□□ -0.67
COL4A3BP-202ENST00000357457 ZNF333Q96JL9 665 aa10.86□□□□□ -0.67
COL4A3BP-202ENST00000357457 PUS3Q9BZE2 481 aaKnown RBP10.86□□□□□ -0.67
COL4A3BP-202ENST00000357457 TMEM39BQ9GZU3 492 aa10.86□□□□□ -0.67
COL4A3BP-202ENST00000357457 C9orf78Q9NZ63 289 aaPredicted RBP10.86□□□□□ -0.67
COL4A3BP-202ENST00000357457 UTYO14607 1347 aa10.85□□□□□ -0.67
COL4A3BP-202ENST00000357457 ARAP2Q8WZ64 1704 aa10.85□□□□□ -0.67
COL4A3BP-202ENST00000357457 CRKP46108 304 aa10.85□□□□□ -0.67
COL4A3BP-202ENST00000357457 TNNI2P48788 182 aa10.85□□□□□ -0.67
COL4A3BP-202ENST00000357457 GTF2A2P52657 109 aa10.85□□□□□ -0.67
COL4A3BP-202ENST00000357457 VGLL4Q14135 290 aa10.85□□□□□ -0.67
COL4A3BP-202ENST00000357457 ARHGEF6Q15052 776 aa10.85□□□□□ -0.67
COL4A3BP-202ENST00000357457 GRIK5Q16478 980 aa10.85□□□□□ -0.67
COL4A3BP-202ENST00000357457 ZFYVE28Q9HCC9 887 aa10.85□□□□□ -0.67
COL4A3BP-202ENST00000357457 RANBP2P49792 3224 aaKnown RBP10.85□□□□□ -0.67
COL4A3BP-202ENST00000357457 CCL15-CCL14A0A0B4J2E2 113 aa10.84□□□□□ -0.67
COL4A3BP-202ENST00000357457 TCP10L2B9ZVM9 353 aa10.84□□□□□ -0.67
COL4A3BP-202ENST00000357457 TAF1CQ15572 869 aaPredicted RBP10.84□□□□□ -0.67
COL4A3BP-202ENST00000357457 CCL15Q16663 113 aa10.84□□□□□ -0.67
COL4A3BP-202ENST00000357457 FKBP1CQ5VVH2 108 aa10.84□□□□□ -0.67
COL4A3BP-202ENST00000357457 NBPF11Q86T75 865 aa10.84□□□□□ -0.67
COL4A3BP-202ENST00000357457 FAM43AQ8N2R8 423 aa10.84□□□□□ -0.67
COL4A3BP-202ENST00000357457 TBC1D22AQ8WUA7 517 aa10.84□□□□□ -0.67
COL4A3BP-202ENST00000357457 SUCLG2Q96I99 432 aa10.84□□□□□ -0.67
COL4A3BP-202ENST00000357457 TMEM106CQ9BVX2 250 aa10.84□□□□□ -0.67
COL4A3BP-202ENST00000357457 SRCIN1Q9C0H9 1055 aa10.84□□□□□ -0.67
COL4A3BP-202ENST00000357457 ZCCHC17Q9NP64 241 aaKnown RBP10.84□□□□□ -0.67
COL4A3BP-202ENST00000357457 MROH5Q6ZUA9 1318 aa10.84□□□□□ -0.67
COL4A3BP-202ENST00000357457 SPDYE5A6NIY4 337 aa10.83□□□□□ -0.68
COL4A3BP-202ENST00000357457 TLR2O60603 784 aa10.83□□□□□ -0.68
COL4A3BP-202ENST00000357457 NBPF7P0C2Y1 421 aaPredicted RBP10.83□□□□□ -0.68
COL4A3BP-202ENST00000357457 RABL6Q3YEC7 729 aaPredicted RBP10.83□□□□□ -0.68
COL4A3BP-202ENST00000357457 APOBEC3HQ6NTF7 200 aaKnown RBP10.83□□□□□ -0.68
COL4A3BP-202ENST00000357457 FAM83AQ86UY5 434 aa10.83□□□□□ -0.68
COL4A3BP-202ENST00000357457 ERO1BQ86YB8 467 aa10.83□□□□□ -0.68
COL4A3BP-202ENST00000357457 VGLL2Q8N8G2 317 aa10.83□□□□□ -0.68
COL4A3BP-202ENST00000357457 ZDHHC15Q96MV8 337 aa10.83□□□□□ -0.68
COL4A3BP-202ENST00000357457 SUGT1Q9Y2Z0 365 aa10.83□□□□□ -0.68
COL4A3BP-202ENST00000357457 CSADQ9Y600 493 aa10.83□□□□□ -0.68
COL4A3BP-202ENST00000357457 PTCH2Q9Y6C5 1203 aa10.83□□□□□ -0.68
COL4A3BP-202ENST00000357457 TRIOBPQ9H2D6 2365 aa10.83□□□□□ -0.68
COL4A3BP-202ENST00000357457 PDE8BO95263 885 aa10.82□□□□□ -0.68
COL4A3BP-202ENST00000357457 GNRH1P01148 92 aa10.82□□□□□ -0.68
COL4A3BP-202ENST00000357457 SLC9C1Q4G0N8 1177 aa10.82□□□□□ -0.68
COL4A3BP-202ENST00000357457 LRRC24Q50LG9 513 aa10.82□□□□□ -0.68
COL4A3BP-202ENST00000357457 OTUD5Q96G74 571 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 325.1 ms