RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 RAB17Q9H0T7 212 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 AKAP6Q13023 2319 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 B4DLN1 442 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 SDSP20132 328 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 MRPL12P52815 198 aaKnown RBP7.38□□□□□ -1.23
VPS13B-202ENST00000357162 CLSTN2Q9H4D0 955 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 HOMER3Q9NSC5 361 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 MRGBPQ9NV56 204 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 A0A1W2PQ27 194 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 A0A1W2PQ64 194 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 A0A1W2PQD8 194 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 CCDC152Q4G0S7 254 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 TUBB6Q9BUF5 446 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 CCDC169A6NNP5 214 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 WDHD1O75717 1129 aaPredicted RBP7.38□□□□□ -1.23
VPS13B-202ENST00000357162 VIMP08670 466 aaKnown RBP7.38□□□□□ -1.23
VPS13B-202ENST00000357162 IFIT5Q13325 482 aaKnown RBP7.38□□□□□ -1.23
VPS13B-202ENST00000357162 FBXO41Q8TF61 875 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 CNNM1Q9NRU3 951 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 KIAA0232Q92628 1395 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 DRP2Q13474 957 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 TRIOBPQ9H2D6 2365 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 PPP1R12CQ9BZL4 782 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 PRPF6O94906 941 aaKnown RBP7.37□□□□□ -1.23
VPS13B-202ENST00000357162 HSPA8P11142 646 aaKnown RBP7.37□□□□□ -1.23
VPS13B-202ENST00000357162 GSTO1P78417 241 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 LRCH2Q5VUJ6 765 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 NBPF10Q6P3W6 841 aaKnown RBP7.37□□□□□ -1.23
VPS13B-202ENST00000357162 SMARCC2Q8TAQ2 1214 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 TBC1D31Q96DN5 1066 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 SEPT11Q9NVA2 429 aaKnown RBP7.37□□□□□ -1.23
VPS13B-202ENST00000357162 PCP11498 1178 aaKnown RBP7.37□□□□□ -1.23
VPS13B-202ENST00000357162 NMIQ13287 307 aaPredicted RBP7.37□□□□□ -1.23
VPS13B-202ENST00000357162 SULT6B1Q6IMI4 303 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 APBB1IPQ7Z5R6 666 aaPredicted RBP7.37□□□□□ -1.23
VPS13B-202ENST00000357162 ACTR5Q9H9F9 607 aaPredicted RBP7.37□□□□□ -1.23
VPS13B-202ENST00000357162 NLRP2Q9NX02 1062 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 ZNF213O14771 459 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 METAP2P50579 478 aaKnown RBP eCLIP7.37□□□□□ -1.23
VPS13B-202ENST00000357162 CAVIN4Q5BKX8 364 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 ALS2CLQ60I27 953 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 INTS8Q75QN2 995 aaKnown RBP7.37□□□□□ -1.23
VPS13B-202ENST00000357162 CEP120Q8N960 986 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 ABTB2Q8N961 1025 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 VTI1AQ96AJ9 217 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 GGNBP2Q9H3C7 697 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 LCMT1Q9UIC8 334 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 BZW2Q9Y6E2 419 aaKnown RBP7.37□□□□□ -1.23
VPS13B-202ENST00000357162 ZNF189O75820 626 aaPredicted RBP7.37□□□□□ -1.23
VPS13B-202ENST00000357162 CTNNA2P26232 953 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 MMS22LQ6ZRQ5 1243 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 MCUR1Q96AQ8 359 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 I3L4J1 428 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 TSC1Q92574 1164 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 DIDO1Q9BTC0 2240 aaKnown RBP7.37□□□□□ -1.23
VPS13B-202ENST00000357162 GNA14O95837 355 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 EVCP57679 992 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 USP26Q9BXU7 913 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 TRMT1Q9NXH9 659 aaKnown RBP7.37□□□□□ -1.23
VPS13B-202ENST00000357162 MYH6P13533 1939 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 NUTM2FA1L443 756 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 CUTAO60888 179 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 HSPA6P17066 643 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 PCK1P35558 622 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 ETF1P62495 437 aaKnown RBP7.37□□□□□ -1.23
VPS13B-202ENST00000357162 NUTM2GQ5VZR2 741 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 CNNM4Q6P4Q7 775 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 MICALL1Q8N3F8 863 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 LTV1Q96GA3 475 aaPredicted RBP7.37□□□□□ -1.23
VPS13B-202ENST00000357162 ANKRD27Q96NW4 1050 aa7.37□□□□□ -1.23
VPS13B-202ENST00000357162 ZNF853P0CG23 659 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 LEO1Q8WVC0 666 aaPredicted RBP7.36□□□□□ -1.23
VPS13B-202ENST00000357162 CDC5LQ99459 802 aaKnown RBP7.36□□□□□ -1.23
VPS13B-202ENST00000357162 UQCRFS1P1P0C7P4 283 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 NEDD9Q14511 834 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 HAUS4Q9H6D7 363 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 PHLPP2Q6ZVD8 1323 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 STX10O60499 249 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 C8orf74Q6P047 294 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 GBP5Q96PP8 586 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 CDK19Q9BWU1 502 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 ARID1BQ8NFD5 2236 aaPredicted RBP7.36□□□□□ -1.23
VPS13B-202ENST00000357162 CEP85LQ5SZL2 805 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 SEL1L2Q5TEA6 688 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 CCDC65Q8IXS2 484 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 HAUS2Q9NVX0 235 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 CABP2Q9NPB3 220 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 DACT1Q9NYF0 836 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 ADGRL2O95490 1459 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 SRGAP1Q7Z6B7 1085 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 TCHPQ9BT92 498 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 USP16Q9Y5T5 823 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 LMNB1P20700 586 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 NR1H3Q13133 447 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 CFAP70Q5T0N1 1121 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 VEZTQ9HBM0 779 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 TMOD2Q9NZR1 351 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 A0A087WUV0 522 aaPredicted RBP7.36□□□□□ -1.23
VPS13B-202ENST00000357162 EIF3CLB5ME19 914 aaKnown RBP7.36□□□□□ -1.23
VPS13B-202ENST00000357162 TCP1P17987 556 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms