RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 XDHP47989 1333 aa30.38■■■□□ 2.45
CLK2-201ENST00000355560 PDS5AQ29RF7 1337 aaKnown RBP30.38■■■□□ 2.45
CLK2-201ENST00000355560 ADGRA1Q86SQ6 560 aa30.38■■■□□ 2.45
CLK2-201ENST00000355560 MB21D2Q8IYB1 491 aaPredicted RBP30.38■■■□□ 2.45
CLK2-201ENST00000355560 GZF1Q9H116 711 aaPredicted RBP30.38■■■□□ 2.45
CLK2-201ENST00000355560 ZSCAN22P10073 491 aaPredicted RBP30.37■■■□□ 2.45
CLK2-201ENST00000355560 APOBRQ0VD83 1088 aa30.37■■■□□ 2.45
CLK2-201ENST00000355560 ALX1Q15699 326 aa30.37■■■□□ 2.45
CLK2-201ENST00000355560 IFNL3Q8IZI9 196 aa30.37■■■□□ 2.45
CLK2-201ENST00000355560 RGS17Q9UGC6 210 aaPredicted RBP30.37■■■□□ 2.45
CLK2-201ENST00000355560 LEMD3Q9Y2U8 911 aa30.37■■■□□ 2.45
CLK2-201ENST00000355560 GNAT2P19087 354 aa30.37■■■□□ 2.45
CLK2-201ENST00000355560 TBC1D10CQ8IV04 446 aa30.37■■■□□ 2.45
CLK2-201ENST00000355560 NAPBQ9H115 298 aa30.37■■■□□ 2.45
CLK2-201ENST00000355560 MCM5P33992 734 aa30.36■■■□□ 2.45
CLK2-201ENST00000355560 NLGN1Q8N2Q7 840 aa30.36■■■□□ 2.45
CLK2-201ENST00000355560 SLC4A4Q9Y6R1 1079 aa30.35■■■□□ 2.45
CLK2-201ENST00000355560 GSG1L2A8MUP6 293 aa30.35■■■□□ 2.45
CLK2-201ENST00000355560 PRKAB2O43741 272 aa30.35■■■□□ 2.45
CLK2-201ENST00000355560 FBXL16Q8N461 479 aa30.35■■■□□ 2.45
CLK2-201ENST00000355560 LMBRD1Q9NUN5 540 aa30.35■■■□□ 2.45
CLK2-201ENST00000355560 SCRN1Q12765 414 aa30.34■■■□□ 2.45
CLK2-201ENST00000355560 TRDNQ13061 729 aa30.34■■■□□ 2.45
CLK2-201ENST00000355560 RGPD3A6NKT7 1758 aaPredicted RBP30.34■■■□□ 2.45
CLK2-201ENST00000355560 RGPD4Q7Z3J3 1758 aa30.34■■■□□ 2.45
CLK2-201ENST00000355560 PRC1O43663 620 aa30.34■■■□□ 2.45
CLK2-201ENST00000355560 PFKFB2O60825 505 aa30.34■■■□□ 2.45
CLK2-201ENST00000355560 FLAD1Q8NFF5 587 aa30.34■■■□□ 2.45
CLK2-201ENST00000355560 CHAF1AQ13111 956 aaPredicted RBP30.33■■■□□ 2.45
CLK2-201ENST00000355560 POTEAQ6S8J7 498 aa30.33■■■□□ 2.45
CLK2-201ENST00000355560 NACAP1Q9BZK3 213 aa30.33■■■□□ 2.45
CLK2-201ENST00000355560 HOXA10P31260 410 aaPredicted RBP30.32■■■□□ 2.44
CLK2-201ENST00000355560 FOXD4L6Q3SYB3 417 aaPredicted RBP30.32■■■□□ 2.44
CLK2-201ENST00000355560 NAA16Q6N069 864 aaPredicted RBP30.32■■■□□ 2.44
CLK2-201ENST00000355560 FOXD4L3Q6VB84 417 aaPredicted RBP30.32■■■□□ 2.44
CLK2-201ENST00000355560 MTMR6Q9Y217 621 aa30.32■■■□□ 2.44
CLK2-201ENST00000355560 ANKRD31Q8N7Z5 1873 aa30.32■■■□□ 2.44
CLK2-201ENST00000355560 MAGEB6P1A0A0J9YX57 407 aa30.32■■■□□ 2.44
CLK2-201ENST00000355560 KLRG2A4D1S0 409 aaPredicted RBP30.32■■■□□ 2.44
CLK2-201ENST00000355560 PRPF40AO75400 957 aaKnown RBP30.32■■■□□ 2.44
CLK2-201ENST00000355560 F13A1P00488 732 aa30.32■■■□□ 2.44
CLK2-201ENST00000355560 ANTXR2P58335 489 aa30.32■■■□□ 2.44
CLK2-201ENST00000355560 LARP1BQ659C4 914 aaKnown RBP30.32■■■□□ 2.44
CLK2-201ENST00000355560 DDX49Q9Y6V7 483 aaKnown RBP30.32■■■□□ 2.44
CLK2-201ENST00000355560 CHD4Q14839 1912 aa30.31■■■□□ 2.44
CLK2-201ENST00000355560 TDO2P48775 406 aa30.31■■■□□ 2.44
CLK2-201ENST00000355560 GPSM2P81274 684 aa30.31■■■□□ 2.44
CLK2-201ENST00000355560 NAP1L2Q9ULW6 460 aaPredicted RBP30.31■■■□□ 2.44
CLK2-201ENST00000355560 NSFL1CQ9UNZ2 370 aaKnown RBP30.31■■■□□ 2.44
CLK2-201ENST00000355560 NRXN2Q9P2S2 1712 aa30.31■■■□□ 2.44
CLK2-201ENST00000355560 PDCP20941 246 aa30.31■■■□□ 2.44
CLK2-201ENST00000355560 ZNF384Q8TF68 577 aa30.31■■■□□ 2.44
CLK2-201ENST00000355560 GPHNQ9NQX3 736 aaPredicted RBP30.31■■■□□ 2.44
CLK2-201ENST00000355560 WDR19Q8NEZ3 1342 aa30.31■■■□□ 2.44
CLK2-201ENST00000355560 VPS37CA5D8V6 355 aaPredicted RBP30.3■■■□□ 2.44
CLK2-201ENST00000355560 JAK2O60674 1132 aa30.3■■■□□ 2.44
CLK2-201ENST00000355560 BBOX1O75936 387 aa30.3■■■□□ 2.44
CLK2-201ENST00000355560 KLHL40Q2TBA0 621 aa30.29■■■□□ 2.44
CLK2-201ENST00000355560 NSUN4Q96CB9 384 aaKnown RBP30.29■■■□□ 2.44
CLK2-201ENST00000355560 ZNF274Q96GC6 653 aaPredicted RBP30.29■■■□□ 2.44
CLK2-201ENST00000355560 CRAMP1Q96RY5 1269 aa30.29■■■□□ 2.44
CLK2-201ENST00000355560 RIOK1Q9BRS2 568 aaKnown RBP30.29■■■□□ 2.44
CLK2-201ENST00000355560 TIAM2Q8IVF5 1701 aa30.29■■■□□ 2.44
CLK2-201ENST00000355560 NEDD4P46934 1319 aa30.29■■■□□ 2.44
CLK2-201ENST00000355560 ZBTB22O15209 634 aa30.29■■■□□ 2.44
CLK2-201ENST00000355560 PDIA4P13667 645 aaKnown RBP30.29■■■□□ 2.44
CLK2-201ENST00000355560 JAG2Q9Y219 1238 aa30.29■■■□□ 2.44
CLK2-201ENST00000355560 MAST2Q6P0Q8 1798 aa30.29■■■□□ 2.44
CLK2-201ENST00000355560 PRDX5P30044 214 aa30.28■■■□□ 2.44
CLK2-201ENST00000355560 PDIA3P30101 505 aaKnown RBP30.28■■■□□ 2.44
CLK2-201ENST00000355560 EVCP57679 992 aa30.28■■■□□ 2.44
CLK2-201ENST00000355560 MECOMQ03112 1051 aa30.28■■■□□ 2.44
CLK2-201ENST00000355560 GPR101Q96P66 508 aaPredicted RBP30.28■■■□□ 2.44
CLK2-201ENST00000355560 UFL1O94874 794 aa30.28■■■□□ 2.44
CLK2-201ENST00000355560 CCT2P78371 535 aaKnown RBP30.28■■■□□ 2.44
CLK2-201ENST00000355560 ZNF804AQ7Z570 1209 aa30.28■■■□□ 2.44
CLK2-201ENST00000355560 SDR42E1Q8WUS8 393 aa30.28■■■□□ 2.44
CLK2-201ENST00000355560 LLPHQ9BRT6 129 aaKnown RBP30.28■■■□□ 2.44
CLK2-201ENST00000355560 BRIP1Q9BX63 1249 aa30.28■■■□□ 2.44
CLK2-201ENST00000355560 CTDSPL2Q05D32 466 aa30.27■■■□□ 2.44
CLK2-201ENST00000355560 ATP6V1DQ9Y5K8 247 aa30.27■■■□□ 2.44
CLK2-201ENST00000355560 CCDC88AQ3V6T2 1871 aa30.27■■■□□ 2.44
CLK2-201ENST00000355560 TCHHQ07283 1943 aa30.27■■■□□ 2.44
CLK2-201ENST00000355560 B4E1Z4 1266 aa30.26■■■□□ 2.44
CLK2-201ENST00000355560 C15orf52Q6ZUT6 534 aaKnown RBP30.26■■■□□ 2.44
CLK2-201ENST00000355560 MMP10P09238 476 aa30.26■■■□□ 2.43
CLK2-201ENST00000355560 ATP2B4P23634 1241 aa30.26■■■□□ 2.43
CLK2-201ENST00000355560 NKX2-3Q8TAU0 364 aa30.26■■■□□ 2.43
CLK2-201ENST00000355560 GGA1Q9UJY5 639 aa30.26■■■□□ 2.43
CLK2-201ENST00000355560 DYNLL1P63167 89 aaKnown RBP30.25■■■□□ 2.43
CLK2-201ENST00000355560 CYB5R4Q7L1T6 521 aa30.25■■■□□ 2.43
CLK2-201ENST00000355560 TDRD7Q8NHU6 1098 aaKnown RBP30.25■■■□□ 2.43
CLK2-201ENST00000355560 NCOA5Q9HCD5 579 aaKnown RBP30.25■■■□□ 2.43
CLK2-201ENST00000355560 LRRC37AA6NMS7 1700 aa30.25■■■□□ 2.43
CLK2-201ENST00000355560 CDC37L1Q7L3B6 337 aa30.25■■■□□ 2.43
CLK2-201ENST00000355560 NSUN7Q8NE18 718 aaKnown RBP30.25■■■□□ 2.43
CLK2-201ENST00000355560 SMARCC2Q8TAQ2 1214 aa30.25■■■□□ 2.43
CLK2-201ENST00000355560 DDX11Q96FC9 970 aa30.24■■■□□ 2.43
CLK2-201ENST00000355560 KLF18A0A0U1RQI7 1052 aa30.23■■■□□ 2.43
CLK2-201ENST00000355560 AKNAD1Q5T1N1 836 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 1269.4 ms