RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 C6orf50Q9HD87 102 aa18.87■□□□□ 0.61
SMARCA4-201ENST00000344626 ADRA2BP18089 450 aa18.87■□□□□ 0.61
SMARCA4-201ENST00000344626 DCAF15Q66K64 600 aa18.87■□□□□ 0.61
SMARCA4-201ENST00000344626 SPHKAPQ2M3C7 1700 aa18.86■□□□□ 0.61
SMARCA4-201ENST00000344626 ZSCAN16Q9H4T2 348 aaPredicted RBP18.86■□□□□ 0.61
SMARCA4-201ENST00000344626 POTEJP0CG39 1038 aa18.86■□□□□ 0.61
SMARCA4-201ENST00000344626 UBA7P41226 1012 aa18.86■□□□□ 0.61
SMARCA4-201ENST00000344626 NAPAP54920 295 aa18.86■□□□□ 0.61
SMARCA4-201ENST00000344626 CIAPIN1Q6FI81 312 aa18.86■□□□□ 0.61
SMARCA4-201ENST00000344626 TMC4Q7Z404 712 aa18.86■□□□□ 0.61
SMARCA4-201ENST00000344626 CTAGE5O15320 804 aa18.85■□□□□ 0.61
SMARCA4-201ENST00000344626 STX6O43752 255 aa18.85■□□□□ 0.61
SMARCA4-201ENST00000344626 Q6ZUG5 572 aa18.85■□□□□ 0.61
SMARCA4-201ENST00000344626 CHST3Q7LGC8 479 aa18.85■□□□□ 0.61
SMARCA4-201ENST00000344626 NLRP10Q86W26 655 aa18.85■□□□□ 0.61
SMARCA4-201ENST00000344626 MNS1Q8NEH6 495 aa18.85■□□□□ 0.61
SMARCA4-201ENST00000344626 CALML3P27482 149 aa18.85■□□□□ 0.61
SMARCA4-201ENST00000344626 ZKSCAN3Q9BRR0 538 aa18.85■□□□□ 0.61
SMARCA4-201ENST00000344626 MYO6Q9UM54 1294 aa18.85■□□□□ 0.61
SMARCA4-201ENST00000344626 NOD1Q9Y239 953 aa18.85■□□□□ 0.61
SMARCA4-201ENST00000344626 SOS2Q07890 1332 aaPredicted RBP18.85■□□□□ 0.61
SMARCA4-201ENST00000344626 ZAP70P43403 619 aa18.85■□□□□ 0.61
SMARCA4-201ENST00000344626 CAGE1Q8TC20 777 aa18.84■□□□□ 0.61
SMARCA4-201ENST00000344626 ALG1Q9BT22 464 aa18.84■□□□□ 0.61
SMARCA4-201ENST00000344626 CDK12Q9NYV4 1490 aaPredicted RBP18.84■□□□□ 0.61
SMARCA4-201ENST00000344626 ERVV-1B6SEH8 477 aa18.84■□□□□ 0.61
SMARCA4-201ENST00000344626 KIF22Q14807 665 aa18.84■□□□□ 0.61
SMARCA4-201ENST00000344626 PLEKHM2Q8IWE5 1019 aa18.84■□□□□ 0.61
SMARCA4-201ENST00000344626 APPBP2Q92624 585 aa18.84■□□□□ 0.61
SMARCA4-201ENST00000344626 GPCPD1Q9NPB8 672 aa18.84■□□□□ 0.61
SMARCA4-201ENST00000344626 PNMA6EA0A0J9YXQ4 647 aa18.84■□□□□ 0.61
SMARCA4-201ENST00000344626 SPDYE3A6NKU9 549 aa18.84■□□□□ 0.61
SMARCA4-201ENST00000344626 PAGR1Q9BTK6 254 aa18.84■□□□□ 0.61
SMARCA4-201ENST00000344626 NOM1Q5C9Z4 860 aaKnown RBP18.84■□□□□ 0.61
SMARCA4-201ENST00000344626 CLEC4GQ6UXB4 293 aa18.84■□□□□ 0.61
SMARCA4-201ENST00000344626 CNNM3Q8NE01 707 aa18.83■□□□□ 0.61
SMARCA4-201ENST00000344626 RBM28Q9NW13 759 aaKnown RBP18.83■□□□□ 0.61
SMARCA4-201ENST00000344626 CCDC150Q8NCX0 1101 aa18.83■□□□□ 0.61
SMARCA4-201ENST00000344626 SUSD4Q5VX71 490 aa18.83■□□□□ 0.6
SMARCA4-201ENST00000344626 KANK3Q6NY19 840 aa18.83■□□□□ 0.6
SMARCA4-201ENST00000344626 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.83■□□□□ 0.63e-6■■■■■ 29.3
SMARCA4-201ENST00000344626 EIF5P55010 431 aaKnown RBP18.83■□□□□ 0.6
SMARCA4-201ENST00000344626 PLEKHF1Q96S99 279 aa18.83■□□□□ 0.6
SMARCA4-201ENST00000344626 LRRC24Q50LG9 513 aa18.82■□□□□ 0.6
SMARCA4-201ENST00000344626 ANO10Q9NW15 660 aa18.82■□□□□ 0.6
SMARCA4-201ENST00000344626 FBXO3Q9UK99 471 aa18.82■□□□□ 0.6
SMARCA4-201ENST00000344626 LEMD3Q9Y2U8 911 aa18.82■□□□□ 0.6
SMARCA4-201ENST00000344626 SPATA31A5Q5VU36 1347 aa18.82■□□□□ 0.6
SMARCA4-201ENST00000344626 SPATA31A7Q8IWB4 1347 aa18.82■□□□□ 0.6
SMARCA4-201ENST00000344626 OTUD7BQ6GQQ9 843 aa18.82■□□□□ 0.6
SMARCA4-201ENST00000344626 MCM4P33991 863 aa18.82■□□□□ 0.6
SMARCA4-201ENST00000344626 CROCC2H7BZ55 1655 aa18.82■□□□□ 0.6
SMARCA4-201ENST00000344626 CREB3L3Q68CJ9 461 aa18.82■□□□□ 0.6
SMARCA4-201ENST00000344626 DHX32Q7L7V1 743 aaKnown RBP18.82■□□□□ 0.6
SMARCA4-201ENST00000344626 USP44Q9H0E7 712 aa18.82■□□□□ 0.6
SMARCA4-201ENST00000344626 A0A0G2JLW4 131 aa18.81■□□□□ 0.6
SMARCA4-201ENST00000344626 ZNF397Q8NF99 534 aaPredicted RBP18.81■□□□□ 0.6
SMARCA4-201ENST00000344626 TBC1D32Q96NH3 1257 aa18.81■□□□□ 0.6
SMARCA4-201ENST00000344626 TULP4Q9NRJ4 1543 aa18.81■□□□□ 0.6
SMARCA4-201ENST00000344626 PARP1P09874 1014 aaKnown RBP18.81■□□□□ 0.6
SMARCA4-201ENST00000344626 HLFQ16534 295 aa18.81■□□□□ 0.6
SMARCA4-201ENST00000344626 CHMLP26374 656 aa18.81■□□□□ 0.6
SMARCA4-201ENST00000344626 GNA11P29992 359 aa18.81■□□□□ 0.6
SMARCA4-201ENST00000344626 FKBP15Q5T1M5 1219 aa18.81■□□□□ 0.6
SMARCA4-201ENST00000344626 NSMFQ6X4W1 530 aa18.81■□□□□ 0.6
SMARCA4-201ENST00000344626 GPHNQ9NQX3 736 aaPredicted RBP18.81■□□□□ 0.6
SMARCA4-201ENST00000344626 CEP170BQ9Y4F5 1589 aaPredicted RBP18.81■□□□□ 0.6
SMARCA4-201ENST00000344626 CPSF1Q10570 1443 aaKnown RBP18.81■□□□□ 0.6
SMARCA4-201ENST00000344626 IDEP14735 1019 aa18.8■□□□□ 0.6
SMARCA4-201ENST00000344626 GADL1Q6ZQY3 521 aa18.8■□□□□ 0.6
SMARCA4-201ENST00000344626 SLC1A4P43007 532 aa18.8■□□□□ 0.6
SMARCA4-201ENST00000344626 MKRN3Q13064 507 aaKnown RBP18.8■□□□□ 0.6
SMARCA4-201ENST00000344626 SEPT11Q9NVA2 429 aaKnown RBP18.8■□□□□ 0.6
SMARCA4-201ENST00000344626 ADAMTS13Q76LX8 1427 aa18.8■□□□□ 0.6
SMARCA4-201ENST00000344626 UBE4AQ14139 1066 aa18.8■□□□□ 0.6
SMARCA4-201ENST00000344626 HOMER2Q9NSB8 354 aa18.8■□□□□ 0.6
SMARCA4-201ENST00000344626 GPAA1O43292 621 aa18.79■□□□□ 0.6
SMARCA4-201ENST00000344626 BRDTQ58F21 947 aaPredicted RBP18.79■□□□□ 0.6
SMARCA4-201ENST00000344626 FCHSD1Q86WN1 690 aa18.79■□□□□ 0.6
SMARCA4-201ENST00000344626 CHRNA5P30532 468 aa18.79■□□□□ 0.6
SMARCA4-201ENST00000344626 FSIP1Q8NA03 581 aa18.79■□□□□ 0.6
SMARCA4-201ENST00000344626 PUS3Q9BZE2 481 aaKnown RBP18.79■□□□□ 0.6
SMARCA4-201ENST00000344626 SUPT20HL1Q3ZLR7 823 aa18.79■□□□□ 0.6
SMARCA4-201ENST00000344626 BEND3Q5T5X7 828 aa18.79■□□□□ 0.6
SMARCA4-201ENST00000344626 CCDC102BQ68D86 513 aa18.79■□□□□ 0.6
SMARCA4-201ENST00000344626 KBTBD3Q8NAB2 608 aa18.79■□□□□ 0.6
SMARCA4-201ENST00000344626 NAP1L4Q99733 375 aaKnown RBP18.79■□□□□ 0.6
SMARCA4-201ENST00000344626 CETN1Q12798 172 aa18.79■□□□□ 0.6
SMARCA4-201ENST00000344626 ABCA6Q8N139 1617 aa18.79■□□□□ 0.6
SMARCA4-201ENST00000344626 CEP152O94986 1710 aa18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 TBC1D9BQ66K14 1250 aa18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 CCDC129Q6ZRS4 1044 aa18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 TBC1D2Q9BYX2 928 aa18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 DDX19AQ9NUU7 478 aaKnown RBP18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 GRIN3BO60391 1043 aa18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 PDE8BO95263 885 aa18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 GRAPQ13588 217 aa18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 BARGINQ6ZT62 677 aa18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 GRAPLQ8TC17 118 aaPredicted RBP18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 TMX3Q96JJ7 454 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms