RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 ZNHIT6Q9NWK9 470 aaKnown RBP9.76□□□□□ -0.85
TDP1-201ENST00000335725 GGA2Q9UJY4 613 aa9.76□□□□□ -0.85
TDP1-201ENST00000335725 BUB1BO60566 1050 aaPredicted RBP9.76□□□□□ -0.85
TDP1-201ENST00000335725 SCNN1BP51168 640 aa9.76□□□□□ -0.85
TDP1-201ENST00000335725 TUBB2AQ13885 445 aa9.76□□□□□ -0.85
TDP1-201ENST00000335725 PRPF40BQ6NWY9 871 aaKnown RBP9.76□□□□□ -0.85
TDP1-201ENST00000335725 CYB5D1Q6P9G0 228 aa9.76□□□□□ -0.85
TDP1-201ENST00000335725 TMEM110Q86TL2 294 aa9.76□□□□□ -0.85
TDP1-201ENST00000335725 ITPRIPQ8IWB1 547 aa9.76□□□□□ -0.85
TDP1-201ENST00000335725 SMYD1Q8NB12 490 aa9.76□□□□□ -0.85
TDP1-201ENST00000335725 TUBB2BQ9BVA1 445 aa9.76□□□□□ -0.85
TDP1-201ENST00000335725 RTEL1Q9NZ71 1219 aa9.76□□□□□ -0.85
TDP1-201ENST00000335725 PRDM15P57071 1507 aaPredicted RBP9.75□□□□□ -0.85
TDP1-201ENST00000335725 ARID5BQ14865 1188 aa9.75□□□□□ -0.85
TDP1-201ENST00000335725 STAG2Q8N3U4 1231 aa9.75□□□□□ -0.85
TDP1-201ENST00000335725 DYDC1Q8WWB3 177 aa9.75□□□□□ -0.85
TDP1-201ENST00000335725 PAGR1Q9BTK6 254 aa9.75□□□□□ -0.85
TDP1-201ENST00000335725 PAIP2BQ9ULR5 123 aaKnown RBP9.75□□□□□ -0.85
TDP1-201ENST00000335725 CDHR2Q9BYE9 1310 aa9.75□□□□□ -0.85
TDP1-201ENST00000335725 NDUFAB1O14561 156 aa9.75□□□□□ -0.85
TDP1-201ENST00000335725 MCM3P25205 808 aa9.75□□□□□ -0.85
TDP1-201ENST00000335725 DPY19L2Q6NUT2 758 aa9.75□□□□□ -0.85
TDP1-201ENST00000335725 NOL8Q76FK4 1167 aaKnown RBP9.75□□□□□ -0.85
TDP1-201ENST00000335725 FCHSD1Q86WN1 690 aa9.75□□□□□ -0.85
TDP1-201ENST00000335725 SYCP3Q8IZU3 236 aa9.75□□□□□ -0.85
TDP1-201ENST00000335725 MSANTD4Q8NCY6 345 aa9.75□□□□□ -0.85
TDP1-201ENST00000335725 PRAM1Q96QH2 718 aa9.75□□□□□ -0.85
TDP1-201ENST00000335725 LRRCC1Q9C099 1032 aa9.75□□□□□ -0.85
TDP1-201ENST00000335725 EPC1Q9H2F5 836 aa9.75□□□□□ -0.85
TDP1-201ENST00000335725 ATP1B4Q9UN42 357 aaPredicted RBP9.75□□□□□ -0.85
TDP1-201ENST00000335725 KDM5DQ9BY66 1539 aa9.75□□□□□ -0.85
TDP1-201ENST00000335725 SLC7A5Q01650 507 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 MYBPC3Q14896 1274 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 WHAMMP3Q1A5X7 153 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 NUGGCQ68CJ6 796 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 CCDC146Q8IYE0 955 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 WHAMMQ8TF30 809 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 LEO1Q8WVC0 666 aaPredicted RBP9.74□□□□□ -0.85
TDP1-201ENST00000335725 ACSBG1Q96GR2 724 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 GMEB1Q9Y692 573 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 ABCA10Q8WWZ4 1543 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 MYO1BO43795 1136 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 CNGA1P29973 690 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 GNPTABQ3T906 1256 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 LCA5Q86VQ0 697 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 CCDC13Q8IYE1 715 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 SMARCC2Q8TAQ2 1214 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 LUC7LQ9NQ29 371 aaKnown RBP9.74□□□□□ -0.85
TDP1-201ENST00000335725 PIK3C2GO75747 1445 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 HSPA4P34932 840 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 CHMP4BP1P59074 171 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 RNF187Q5TA31 235 aaPredicted RBP9.74□□□□□ -0.85
TDP1-201ENST00000335725 NSMCE1Q8WV22 266 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 ZWILCHQ9H900 591 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 ABCB6Q9NP58 842 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 ZNF510Q9Y2H8 683 aa9.74□□□□□ -0.85
TDP1-201ENST00000335725 RAD21O60216 631 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 PARP1P09874 1014 aaKnown RBP9.73□□□□□ -0.85
TDP1-201ENST00000335725 STIP1P31948 543 aaKnown RBP9.73□□□□□ -0.85
TDP1-201ENST00000335725 CRELD2Q6UXH1 353 aaPredicted RBP9.73□□□□□ -0.85
TDP1-201ENST00000335725 TEX9Q8N6V9 391 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 KAT14Q9H8E8 782 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 EBF2Q9HAK2 575 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 TUBA8Q9NY65 449 aaPredicted RBP9.73□□□□□ -0.85
TDP1-201ENST00000335725 USP16Q9Y5T5 823 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 LRRD1A4D1F6 860 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 RASSF10A6NK89 507 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 ADCY1Q08828 1119 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 OLFML1Q6UWY5 402 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 ERMNQ8TAM6 284 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 TPX2Q9ULW0 747 aaKnown RBP9.73□□□□□ -0.85
TDP1-201ENST00000335725 RABL2BQ9UNT1 228 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 TNNQ9UQP3 1299 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 TTC21BQ7Z4L5 1316 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 GOLGA6L4A6NEF3 574 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 PRPF6O94906 941 aaKnown RBP9.73□□□□□ -0.85
TDP1-201ENST00000335725 PDHBP11177 359 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 SRGAP1Q7Z6B7 1085 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 FUKQ8N0W3 1084 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 IGSF22Q8N9C0 903 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 GPCPD1Q9NPB8 672 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 MYO1AQ9UBC5 1043 aa9.73□□□□□ -0.85
TDP1-201ENST00000335725 BLMHQ13867 455 aa9.72□□□□□ -0.85
TDP1-201ENST00000335725 TRIM65Q6PJ69 517 aa9.72□□□□□ -0.85
TDP1-201ENST00000335725 CDC37L1Q7L3B6 337 aa9.72□□□□□ -0.85
TDP1-201ENST00000335725 IQSEC3Q9UPP2 1182 aaPredicted RBP9.72□□□□□ -0.85
TDP1-201ENST00000335725 PHF24Q9UPV7 400 aa9.72□□□□□ -0.85
TDP1-201ENST00000335725 EFCAB5A4FU69 1503 aa9.72□□□□□ -0.85
TDP1-201ENST00000335725 RTL1A6NKG5 1358 aa9.72□□□□□ -0.85
TDP1-201ENST00000335725 ABLIM1O14639 778 aa9.72□□□□□ -0.85
TDP1-201ENST00000335725 DZIP1Q86YF9 867 aaKnown RBP9.72□□□□□ -0.85
TDP1-201ENST00000335725 RASSF8Q8NHQ8 419 aa9.72□□□□□ -0.85
TDP1-201ENST00000335725 BRD8Q9H0E9 1235 aa9.72□□□□□ -0.85
TDP1-201ENST00000335725 TBC1D7Q9P0N9 293 aa9.72□□□□□ -0.85
TDP1-201ENST00000335725 ZFATQ9P243 1243 aa9.72□□□□□ -0.85
TDP1-201ENST00000335725 C15orf41Q9Y2V0 281 aa9.72□□□□□ -0.85
TDP1-201ENST00000335725 TCOF1Q13428 1488 aaKnown RBP9.72□□□□□ -0.85
TDP1-201ENST00000335725 MSH6P52701 1360 aa9.72□□□□□ -0.85
TDP1-201ENST00000335725 MGRN1O60291 552 aa9.72□□□□□ -0.85
TDP1-201ENST00000335725 CAPN15O75808 1086 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms