RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 PCDHB15Q9Y5E8 787 aa22.62■■□□□ 1.21
HLA-F-217ENST00000334668 F8W031 263 aaPredicted RBP22.61■■□□□ 1.21
HLA-F-217ENST00000334668 RAB11FIP3O75154 756 aa22.61■■□□□ 1.21
HLA-F-217ENST00000334668 KIF1BPQ96EK5 621 aa22.61■■□□□ 1.21
HLA-F-217ENST00000334668 GLIS2Q9BZE0 524 aaPredicted RBP22.61■■□□□ 1.21
HLA-F-217ENST00000334668 GGA3Q9NZ52 723 aa22.61■■□□□ 1.21
HLA-F-217ENST00000334668 TTF2Q9UNY4 1162 aaKnown RBP22.61■■□□□ 1.21
HLA-F-217ENST00000334668 SUPT16HQ9Y5B9 1047 aaKnown RBP22.61■■□□□ 1.21
HLA-F-217ENST00000334668 HDLBPQ00341 1268 aaKnown RBP22.6■■□□□ 1.21
HLA-F-217ENST00000334668 AAMPQ13685 434 aa22.6■■□□□ 1.21
HLA-F-217ENST00000334668 DCPSQ96C86 337 aaKnown RBP22.6■■□□□ 1.21
HLA-F-217ENST00000334668 DBNDD2Q9BQY9 259 aa22.6■■□□□ 1.21
HLA-F-217ENST00000334668 DBNLQ9UJU6 430 aaKnown RBP22.6■■□□□ 1.21
HLA-F-217ENST00000334668 TRAF5O00463 557 aa22.59■■□□□ 1.21
HLA-F-217ENST00000334668 DLGAP5Q15398 846 aa22.59■■□□□ 1.21
HLA-F-217ENST00000334668 CFAP100Q494V2 611 aa22.59■■□□□ 1.21
HLA-F-217ENST00000334668 GORABQ5T7V8 394 aa22.59■■□□□ 1.21
HLA-F-217ENST00000334668 ANGEL2Q5VTE6 544 aaKnown RBP22.59■■□□□ 1.21
HLA-F-217ENST00000334668 KRT26Q7Z3Y9 468 aa22.59■■□□□ 1.21
HLA-F-217ENST00000334668 ZNF512BQ96KM6 892 aaPredicted RBP22.59■■□□□ 1.21
HLA-F-217ENST00000334668 UQCRFS1P1P0C7P4 283 aa22.58■■□□□ 1.21
HLA-F-217ENST00000334668 PRKAR2AP13861 404 aaKnown RBP22.58■■□□□ 1.21
HLA-F-217ENST00000334668 FMR1Q06787 632 aaKnown RBP eCLIP22.58■■□□□ 1.21
HLA-F-217ENST00000334668 USP48Q86UV5 1035 aa22.58■■□□□ 1.21
HLA-F-217ENST00000334668 DCTPP1Q9H773 170 aa22.58■■□□□ 1.21
HLA-F-217ENST00000334668 CREBZFQ9NS37 354 aa22.58■■□□□ 1.21
HLA-F-217ENST00000334668 PCDHAC2Q9Y5I4 1007 aa22.58■■□□□ 1.21
HLA-F-217ENST00000334668 PRMT6Q96LA8 375 aaPredicted RBP22.57■■□□□ 1.2
HLA-F-217ENST00000334668 CCDC8Q9H0W5 538 aaPredicted RBP22.57■■□□□ 1.2
HLA-F-217ENST00000334668 TLR7Q9NYK1 1049 aaKnown RBP22.57■■□□□ 1.2
HLA-F-217ENST00000334668 HMG20BQ9P0W2 317 aa22.57■■□□□ 1.2
HLA-F-217ENST00000334668 MAST3O60307 1309 aa22.57■■□□□ 1.2
HLA-F-217ENST00000334668 MCAMP43121 646 aa22.56■■□□□ 1.2
HLA-F-217ENST00000334668 CRKP46108 304 aa22.56■■□□□ 1.2
HLA-F-217ENST00000334668 CST9Q5W186 159 aa22.56■■□□□ 1.2
HLA-F-217ENST00000334668 ZGPATQ8N5A5 531 aaKnown RBP22.56■■□□□ 1.2
HLA-F-217ENST00000334668 IL1RAPL2Q9NP60 686 aa22.56■■□□□ 1.2
HLA-F-217ENST00000334668 MYH2Q9UKX2 1941 aa22.56■■□□□ 1.2
HLA-F-217ENST00000334668 TMEM88BA6NKF7 163 aa22.55■■□□□ 1.2
HLA-F-217ENST00000334668 PRDX5P30044 214 aa22.55■■□□□ 1.2
HLA-F-217ENST00000334668 CCDC158Q5M9N0 1113 aa22.55■■□□□ 1.2
HLA-F-217ENST00000334668 HHIPL2Q6UWX4 724 aa22.55■■□□□ 1.2
HLA-F-217ENST00000334668 AACSQ86V21 672 aa22.55■■□□□ 1.2
HLA-F-217ENST00000334668 SULF1Q8IWU6 871 aa22.55■■□□□ 1.2
HLA-F-217ENST00000334668 CLASRPQ8N2M8 674 aaKnown RBP22.55■■□□□ 1.2
HLA-F-217ENST00000334668 SPATA5Q8NB90 893 aa22.55■■□□□ 1.2
HLA-F-217ENST00000334668 AOX1Q06278 1338 aa22.55■■□□□ 1.2
HLA-F-217ENST00000334668 ADM5C9JUS6 153 aa22.54■■□□□ 1.2
HLA-F-217ENST00000334668 HAX1O00165 279 aa22.54■■□□□ 1.2
HLA-F-217ENST00000334668 HTRA3P83110 453 aa22.54■■□□□ 1.2
HLA-F-217ENST00000334668 PI16Q6UXB8 463 aa22.54■■□□□ 1.2
HLA-F-217ENST00000334668 DNAJC5GQ8N7S2 189 aa22.54■■□□□ 1.2
HLA-F-217ENST00000334668 TEKT1Q969V4 418 aa22.54■■□□□ 1.2
HLA-F-217ENST00000334668 ZDHHC15Q96MV8 337 aa22.54■■□□□ 1.2
HLA-F-217ENST00000334668 MYO5AQ9Y4I1 1855 aaKnown RBP22.54■■□□□ 1.2
HLA-F-217ENST00000334668 APBB1O00213 710 aa22.53■■□□□ 1.2
HLA-F-217ENST00000334668 LDHBP07195 334 aaKnown RBP22.53■■□□□ 1.2
HLA-F-217ENST00000334668 TTC39AQ5SRH9 613 aa22.53■■□□□ 1.2
HLA-F-217ENST00000334668 DLK2Q6UY11 383 aa22.53■■□□□ 1.2
HLA-F-217ENST00000334668 RBM5P52756 815 aaKnown RBP eCLIP22.52■■□□□ 1.2
HLA-F-217ENST00000334668 APOBEC3FQ8IUX4 373 aaKnown RBP22.52■■□□□ 1.2
HLA-F-217ENST00000334668 LRRCC1Q9C099 1032 aa22.52■■□□□ 1.2
HLA-F-217ENST00000334668 MYO1BO43795 1136 aa22.51■■□□□ 1.19
HLA-F-217ENST00000334668 CELF2O95319 508 aaKnown RBP22.51■■□□□ 1.19
HLA-F-217ENST00000334668 SPTY2D1Q68D10 685 aaPredicted RBP22.51■■□□□ 1.19
HLA-F-217ENST00000334668 APOBEC3HQ6NTF7 200 aaKnown RBP22.51■■□□□ 1.19
HLA-F-217ENST00000334668 EXOC6Q8TAG9 804 aa22.51■■□□□ 1.19
HLA-F-217ENST00000334668 PCNTO95613 3336 aa22.5■■□□□ 1.19
HLA-F-217ENST00000334668 PRR29P0C7W0 189 aa22.5■■□□□ 1.19
HLA-F-217ENST00000334668 HDAC1Q13547 482 aaPredicted RBP22.5■■□□□ 1.19
HLA-F-217ENST00000334668 ZNF70Q9UC06 446 aaPredicted RBP22.5■■□□□ 1.19
HLA-F-217ENST00000334668 CDCA5Q96FF9 252 aa22.49■■□□□ 1.19
HLA-F-217ENST00000334668 FAM163AQ96GL9 167 aaPredicted RBP22.49■■□□□ 1.19
HLA-F-217ENST00000334668 TDRD3Q9H7E2 651 aaKnown RBP22.49■■□□□ 1.19
HLA-F-217ENST00000334668 ABCF2Q9UG63 623 aa22.49■■□□□ 1.19
HLA-F-217ENST00000334668 SCAF8Q9UPN6 1271 aaKnown RBP22.49■■□□□ 1.19
HLA-F-217ENST00000334668 DAGLAQ9Y4D2 1042 aa22.49■■□□□ 1.19
HLA-F-217ENST00000334668 CLRN2A0PK11 232 aa22.48■■□□□ 1.19
HLA-F-217ENST00000334668 SPDYE4A6NLX3 237 aa22.48■■□□□ 1.19
HLA-F-217ENST00000334668 CYP2E1P05181 493 aaPredicted RBP22.48■■□□□ 1.19
HLA-F-217ENST00000334668 IFIT2P09913 472 aaKnown RBP22.48■■□□□ 1.19
HLA-F-217ENST00000334668 DIXDC1Q155Q3 683 aa22.48■■□□□ 1.19
HLA-F-217ENST00000334668 TBC1D9Q6ZT07 1266 aa22.48■■□□□ 1.19
HLA-F-217ENST00000334668 ERICH6Q7L0X2 663 aa22.48■■□□□ 1.19
HLA-F-217ENST00000334668 ZNF384Q8TF68 577 aa22.48■■□□□ 1.19
HLA-F-217ENST00000334668 SNRKQ9NRH2 765 aa22.48■■□□□ 1.19
HLA-F-217ENST00000334668 GAKO14976 1311 aa22.48■■□□□ 1.19
HLA-F-217ENST00000334668 SMARCA5O60264 1052 aaPredicted RBP22.47■■□□□ 1.19
HLA-F-217ENST00000334668 IGSF3O75054 1194 aa22.47■■□□□ 1.19
HLA-F-217ENST00000334668 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.47■■□□□ 1.19
HLA-F-217ENST00000334668 DEFB129Q9H1M3 183 aa22.47■■□□□ 1.19
HLA-F-217ENST00000334668 PPP2R3BQ9Y5P8 575 aa22.47■■□□□ 1.19
HLA-F-217ENST00000334668 TLL2Q9Y6L7 1015 aa22.47■■□□□ 1.19
HLA-F-217ENST00000334668 DOCK2Q92608 1830 aa22.46■■□□□ 1.19
HLA-F-217ENST00000334668 RASSF10A6NK89 507 aa22.46■■□□□ 1.19
HLA-F-217ENST00000334668 ZAP70P43403 619 aa22.46■■□□□ 1.19
HLA-F-217ENST00000334668 MECOMQ03112 1051 aa22.46■■□□□ 1.19
HLA-F-217ENST00000334668 FKBP1CQ5VVH2 108 aa22.46■■□□□ 1.19
HLA-F-217ENST00000334668 SP7Q8TDD2 431 aaPredicted RBP22.46■■□□□ 1.19
HLA-F-217ENST00000334668 NSUN4Q96CB9 384 aaKnown RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms