RNA–Protein interactions for RNA: ENST00000325942.10

FRAS1-201, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene FRAS1, Length 7,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-201ENST00000325942 GBP3Q9H0R5 595 aa10.78□□□□□ -0.68
FRAS1-201ENST00000325942 DACT3Q96B18 629 aaPredicted RBP10.78□□□□□ -0.68
FRAS1-201ENST00000325942 NAP1L4Q99733 375 aaKnown RBP10.78□□□□□ -0.68
FRAS1-201ENST00000325942 SLC5A4Q9NY91 659 aa10.78□□□□□ -0.68
FRAS1-201ENST00000325942 ORC3Q9UBD5 711 aaPredicted RBP10.78□□□□□ -0.68
FRAS1-201ENST00000325942 KLF18A0A0U1RQI7 1052 aa10.78□□□□□ -0.68
FRAS1-201ENST00000325942 SAT1P21673 171 aa10.78□□□□□ -0.68
FRAS1-201ENST00000325942 SEPT6Q14141 434 aa10.78□□□□□ -0.68
FRAS1-201ENST00000325942 ATAD2Q6PL18 1390 aa10.78□□□□□ -0.68
FRAS1-201ENST00000325942 HGSO14964 777 aaPredicted RBP10.78□□□□□ -0.68
FRAS1-201ENST00000325942 GLRX3O76003 335 aaKnown RBP10.78□□□□□ -0.68
FRAS1-201ENST00000325942 CFBP00751 764 aa10.78□□□□□ -0.68
FRAS1-201ENST00000325942 CCT6AP40227 531 aaKnown RBP10.78□□□□□ -0.68
FRAS1-201ENST00000325942 DLGAP5Q15398 846 aa10.78□□□□□ -0.68
FRAS1-201ENST00000325942 PPP1R7Q15435 360 aa10.78□□□□□ -0.68
FRAS1-201ENST00000325942 OTUD7BQ6GQQ9 843 aa10.78□□□□□ -0.68
FRAS1-201ENST00000325942 N4BP2L2Q92802 583 aaPredicted RBP10.78□□□□□ -0.68
FRAS1-201ENST00000325942 ALKBH8Q96BT7 664 aaKnown RBP10.78□□□□□ -0.68
FRAS1-201ENST00000325942 DHX58Q96C10 678 aa10.78□□□□□ -0.68
FRAS1-201ENST00000325942 CAPZA3Q96KX2 299 aa10.78□□□□□ -0.68
FRAS1-201ENST00000325942 HSPA1LP34931 641 aa10.77□□□□□ -0.68
FRAS1-201ENST00000325942 DNM2P50570 870 aa10.77□□□□□ -0.68
FRAS1-201ENST00000325942 RNASE9P60153 205 aaKnown RBP10.77□□□□□ -0.68
FRAS1-201ENST00000325942 TTC22Q5TAA0 569 aa10.77□□□□□ -0.68
FRAS1-201ENST00000325942 FAM160A1Q05DH4 1040 aa10.77□□□□□ -0.68
FRAS1-201ENST00000325942 FAM114A1Q8IWE2 563 aa10.77□□□□□ -0.68
FRAS1-201ENST00000325942 MSANTD4Q8NCY6 345 aa10.77□□□□□ -0.68
FRAS1-201ENST00000325942 DBF4Q9UBU7 674 aaPredicted RBP10.77□□□□□ -0.68
FRAS1-201ENST00000325942 PARP1P09874 1014 aaKnown RBP10.77□□□□□ -0.69
FRAS1-201ENST00000325942 C6orf163Q5TEZ5 329 aa10.77□□□□□ -0.69
FRAS1-201ENST00000325942 CTR9Q6PD62 1173 aa10.77□□□□□ -0.69
FRAS1-201ENST00000325942 CCDC125Q86Z20 511 aa10.77□□□□□ -0.69
FRAS1-201ENST00000325942 FAM204AQ9H8W3 233 aa10.77□□□□□ -0.69
FRAS1-201ENST00000325942 KCNK9Q9NPC2 374 aa10.77□□□□□ -0.69
FRAS1-201ENST00000325942 ATP6V0A2Q9Y487 856 aa10.77□□□□□ -0.69
FRAS1-201ENST00000325942 TAF5LO75529 589 aa10.77□□□□□ -0.69
FRAS1-201ENST00000325942 MBD3O95983 291 aa10.77□□□□□ -0.69
FRAS1-201ENST00000325942 RMDN2Q96LZ7 410 aa10.77□□□□□ -0.69
FRAS1-201ENST00000325942 ANKRD50Q9ULJ7 1429 aa10.77□□□□□ -0.69
FRAS1-201ENST00000325942 CLRN2A0PK11 232 aa10.77□□□□□ -0.69
FRAS1-201ENST00000325942 YARSP54577 528 aaKnown RBP10.77□□□□□ -0.69
FRAS1-201ENST00000325942 SLC9A5Q14940 896 aa10.77□□□□□ -0.69
FRAS1-201ENST00000325942 PPP2R5AQ15172 486 aa10.77□□□□□ -0.69
FRAS1-201ENST00000325942 LETM2Q2VYF4 491 aa10.77□□□□□ -0.69
FRAS1-201ENST00000325942 C2CD5Q86YS7 1000 aa10.77□□□□□ -0.69
FRAS1-201ENST00000325942 NECAB1Q8N987 351 aa10.77□□□□□ -0.69
FRAS1-201ENST00000325942 ST7Q9NRC1 585 aa10.77□□□□□ -0.69
FRAS1-201ENST00000325942 TMPOP42166 694 aaKnown RBP10.76□□□□□ -0.69
FRAS1-201ENST00000325942 ESR2Q92731 530 aa10.76□□□□□ -0.69
FRAS1-201ENST00000325942 ZSCAN31Q96LW9 406 aaPredicted RBP10.76□□□□□ -0.69
FRAS1-201ENST00000325942 WDR46O15213 610 aaKnown RBP10.76□□□□□ -0.69
FRAS1-201ENST00000325942 EEPD1Q7L9B9 569 aa10.76□□□□□ -0.69
FRAS1-201ENST00000325942 SPDYE1Q8NFV5 336 aaPredicted RBP10.76□□□□□ -0.69
FRAS1-201ENST00000325942 ALG1Q9BT22 464 aa10.76□□□□□ -0.69
FRAS1-201ENST00000325942 FRMD4BQ9Y2L6 1034 aa10.76□□□□□ -0.69
FRAS1-201ENST00000325942 PSDA5PKW4 1024 aaPredicted RBP10.76□□□□□ -0.69
FRAS1-201ENST00000325942 ARHGEF6Q15052 776 aa10.76□□□□□ -0.69
FRAS1-201ENST00000325942 ZBTB43O43298 467 aa10.76□□□□□ -0.69
FRAS1-201ENST00000325942 GJB2P29033 226 aa10.76□□□□□ -0.69
FRAS1-201ENST00000325942 POMGNT1Q8WZA1 660 aa10.76□□□□□ -0.69
FRAS1-201ENST00000325942 SLC52A1Q9NWF4 448 aa10.76□□□□□ -0.69
FRAS1-201ENST00000325942 USP25Q9UHP3 1055 aa10.76□□□□□ -0.69
FRAS1-201ENST00000325942 CD109Q6YHK3 1445 aa10.76□□□□□ -0.69
FRAS1-201ENST00000325942 SCYL2Q6P3W7 929 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 RDH13Q8NBN7 331 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 YIPF2Q9BWQ6 316 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 UBN1Q9NPG3 1134 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 ANKRD30BQ9BXX2 1392 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 CAPN9O14815 690 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 PDE6AP16499 860 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 HACE1Q8IYU2 909 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 SUGCTQ9HAC7 445 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 TACC3Q9Y6A5 838 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 MYOM3Q5VTT5 1437 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 CCDC172P0C7W6 258 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 CCDC155Q8N6L0 562 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 NDUFB9Q9Y6M9 179 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 FANCIQ9NVI1 1328 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 SFPQP23246 707 aaKnown RBP eCLIP10.75□□□□□ -0.692e-7■■□□□ 13.6
FRAS1-201ENST00000325942 NEK1Q96PY6 1258 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 RPS6KC1Q96S38 1066 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 N4BP3O15049 544 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 CDAN1Q8IWY9 1227 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 CLIP2Q9UDT6 1046 aa10.75□□□□□ -0.69
FRAS1-201ENST00000325942 PA2G4Q9UQ80 394 aaKnown RBP10.75□□□□□ -0.69
FRAS1-201ENST00000325942 STX17P56962 302 aa10.74□□□□□ -0.69
FRAS1-201ENST00000325942 VPS52Q8N1B4 723 aa10.74□□□□□ -0.69
FRAS1-201ENST00000325942 TAB3Q8N5C8 712 aaPredicted RBP10.74□□□□□ -0.69
FRAS1-201ENST00000325942 FGD5Q6ZNL6 1462 aa10.74□□□□□ -0.69
FRAS1-201ENST00000325942 AKR1B10O60218 316 aa10.74□□□□□ -0.69
FRAS1-201ENST00000325942 UQCRFS1P1P0C7P4 283 aa10.74□□□□□ -0.69
FRAS1-201ENST00000325942 PRIM1P49642 420 aaKnown RBP10.74□□□□□ -0.69
FRAS1-201ENST00000325942 PIDD1Q9HB75 910 aa10.74□□□□□ -0.69
FRAS1-201ENST00000325942 AKT3Q9Y243 479 aa10.74□□□□□ -0.69
FRAS1-201ENST00000325942 FRMPD2Q68DX3 1309 aaPredicted RBP10.74□□□□□ -0.69
FRAS1-201ENST00000325942 KCNQ4P56696 695 aa10.74□□□□□ -0.69
FRAS1-201ENST00000325942 LRMPQ12912 555 aa10.74□□□□□ -0.69
FRAS1-201ENST00000325942 FMNL3Q8IVF7 1028 aa10.74□□□□□ -0.69
FRAS1-201ENST00000325942 ANKRD35Q8N283 1001 aa10.74□□□□□ -0.69
FRAS1-201ENST00000325942 UBXN4Q92575 508 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms