RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 STK3Q13188 491 aa22.74■■□□□ 1.23
CHMP6-201ENST00000325167 C3orf67Q6ZVT6 689 aa22.74■■□□□ 1.23
CHMP6-201ENST00000325167 SMARCC2Q8TAQ2 1214 aa22.74■■□□□ 1.23
CHMP6-201ENST00000325167 GPT2Q8TD30 523 aa22.74■■□□□ 1.23
CHMP6-201ENST00000325167 PNPLA7Q6ZV29 1317 aa22.74■■□□□ 1.23
CHMP6-201ENST00000325167 DHX16O60231 1041 aaKnown RBP22.74■■□□□ 1.23
CHMP6-201ENST00000325167 VPS37DQ86XT2 251 aa22.74■■□□□ 1.23
CHMP6-201ENST00000325167 MB21D2Q8IYB1 491 aaPredicted RBP22.74■■□□□ 1.23
CHMP6-201ENST00000325167 NACAP1Q9BZK3 213 aa22.74■■□□□ 1.23
CHMP6-201ENST00000325167 GRPEL1Q9HAV7 217 aa22.74■■□□□ 1.23
CHMP6-201ENST00000325167 NPHP1O15259 732 aa22.73■■□□□ 1.23
CHMP6-201ENST00000325167 PHF14O94880 888 aa22.73■■□□□ 1.23
CHMP6-201ENST00000325167 APPP05067 770 aa22.73■■□□□ 1.23
CHMP6-201ENST00000325167 FAM184AQ8NB25 1140 aa22.73■■□□□ 1.23
CHMP6-201ENST00000325167 LRP2BPQ9P2M1 347 aa22.73■■□□□ 1.23
CHMP6-201ENST00000325167 PPP1R1BQ9UD71 204 aaPredicted RBP22.73■■□□□ 1.23
CHMP6-201ENST00000325167 A0A1B0GUL6 1792 aa22.72■■□□□ 1.23
CHMP6-201ENST00000325167 SCRN1Q12765 414 aa22.72■■□□□ 1.23
CHMP6-201ENST00000325167 ZNF827Q17R98 1081 aa22.72■■□□□ 1.23
CHMP6-201ENST00000325167 ZSCAN23Q3MJ62 389 aa22.72■■□□□ 1.23
CHMP6-201ENST00000325167 USP48Q86UV5 1035 aa22.72■■□□□ 1.23
CHMP6-201ENST00000325167 CELF1Q92879 486 aaKnown RBP22.72■■□□□ 1.23
CHMP6-201ENST00000325167 C4AP0C0L4 1744 aa22.72■■□□□ 1.23
CHMP6-201ENST00000325167 PRC1O43663 620 aa22.71■■□□□ 1.23
CHMP6-201ENST00000325167 UBE2HP62256 183 aa22.71■■□□□ 1.23
CHMP6-201ENST00000325167 SNAP23O00161 211 aa22.71■■□□□ 1.23
CHMP6-201ENST00000325167 HAND2P61296 217 aa22.71■■□□□ 1.23
CHMP6-201ENST00000325167 KRT85P78386 507 aa22.71■■□□□ 1.23
CHMP6-201ENST00000325167 APOBRQ0VD83 1088 aa22.71■■□□□ 1.23
CHMP6-201ENST00000325167 LRRC2Q9BYS8 371 aa22.71■■□□□ 1.23
CHMP6-201ENST00000325167 NAPBQ9H115 298 aa22.71■■□□□ 1.23
CHMP6-201ENST00000325167 ZSCAN16Q9H4T2 348 aaPredicted RBP22.71■■□□□ 1.23
CHMP6-201ENST00000325167 ATF5Q9Y2D1 282 aaPredicted RBP22.71■■□□□ 1.23
CHMP6-201ENST00000325167 MBD4O95243 580 aa22.7■■□□□ 1.22
CHMP6-201ENST00000325167 PDIA3P30101 505 aaKnown RBP22.7■■□□□ 1.22
CHMP6-201ENST00000325167 CNNM2Q9H8M5 875 aa22.7■■□□□ 1.22
CHMP6-201ENST00000325167 XRCC6P12956 609 aaKnown RBP eCLIP22.69■■□□□ 1.22
CHMP6-201ENST00000325167 NAA16Q6N069 864 aaPredicted RBP22.69■■□□□ 1.22
CHMP6-201ENST00000325167 FBXO33Q7Z6M2 555 aa22.69■■□□□ 1.22
CHMP6-201ENST00000325167 CNBD1Q8NA66 436 aa22.69■■□□□ 1.22
CHMP6-201ENST00000325167 RGS22Q8NE09 1264 aa22.69■■□□□ 1.22
CHMP6-201ENST00000325167 A0A0G2JLW4 131 aa22.68■■□□□ 1.22
CHMP6-201ENST00000325167 H3BQV1 296 aa22.68■■□□□ 1.22
CHMP6-201ENST00000325167 IFFO2Q5TF58 517 aa22.68■■□□□ 1.22
CHMP6-201ENST00000325167 IFNL3Q8IZI9 196 aa22.68■■□□□ 1.22
CHMP6-201ENST00000325167 NSUN7Q8NE18 718 aaKnown RBP22.68■■□□□ 1.22
CHMP6-201ENST00000325167 TMEM87BQ96K49 555 aa22.68■■□□□ 1.22
CHMP6-201ENST00000325167 CNPY2Q9Y2B0 182 aa22.68■■□□□ 1.22
CHMP6-201ENST00000325167 NFIXQ14938 502 aa22.68■■□□□ 1.22
CHMP6-201ENST00000325167 FAM84BQ96KN1 310 aaPredicted RBP22.68■■□□□ 1.22
CHMP6-201ENST00000325167 SCAND2PQ9GZW5 306 aaPredicted RBP22.68■■□□□ 1.22
CHMP6-201ENST00000325167 ELP1O95163 1332 aa22.67■■□□□ 1.22
CHMP6-201ENST00000325167 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.67■■□□□ 1.22
CHMP6-201ENST00000325167 LETM1O95202 739 aaPredicted RBP22.67■■□□□ 1.22
CHMP6-201ENST00000325167 GYG1P46976 350 aa22.67■■□□□ 1.22
CHMP6-201ENST00000325167 CDC37L1Q7L3B6 337 aa22.67■■□□□ 1.22
CHMP6-201ENST00000325167 CHAMP1Q96JM3 812 aa22.67■■□□□ 1.22
CHMP6-201ENST00000325167 MTA3Q9BTC8 594 aa22.67■■□□□ 1.22
CHMP6-201ENST00000325167 KRT23Q9C075 422 aa22.67■■□□□ 1.22
CHMP6-201ENST00000325167 PTPDC1A2A3K4 754 aa22.66■■□□□ 1.22
CHMP6-201ENST00000325167 GRAPQ13588 217 aa22.66■■□□□ 1.22
CHMP6-201ENST00000325167 FOXD4L6Q3SYB3 417 aaPredicted RBP22.66■■□□□ 1.22
CHMP6-201ENST00000325167 FOXD4L3Q6VB84 417 aaPredicted RBP22.66■■□□□ 1.22
CHMP6-201ENST00000325167 SMIM5Q71RC9 77 aa22.66■■□□□ 1.22
CHMP6-201ENST00000325167 GRAPLQ8TC17 118 aaPredicted RBP22.66■■□□□ 1.22
CHMP6-201ENST00000325167 MYO5AQ9Y4I1 1855 aaKnown RBP22.66■■□□□ 1.22
CHMP6-201ENST00000325167 COL4A1P02462 1669 aa22.66■■□□□ 1.22
CHMP6-201ENST00000325167 JAK2O60674 1132 aa22.65■■□□□ 1.22
CHMP6-201ENST00000325167 CYP7A1P22680 504 aa22.65■■□□□ 1.22
CHMP6-201ENST00000325167 TM4SF1P30408 202 aa22.65■■□□□ 1.22
CHMP6-201ENST00000325167 HIBADHP31937 336 aaKnown RBP22.65■■□□□ 1.22
CHMP6-201ENST00000325167 DNM1Q05193 864 aaKnown RBP22.65■■□□□ 1.22
CHMP6-201ENST00000325167 AKT1S1Q96B36 256 aa22.65■■□□□ 1.22
CHMP6-201ENST00000325167 RNF41Q9H4P4 317 aaPredicted RBP22.65■■□□□ 1.22
CHMP6-201ENST00000325167 ARMT1Q9H993 441 aa22.65■■□□□ 1.22
CHMP6-201ENST00000325167 RAI14Q9P0K7 980 aa22.65■■□□□ 1.22
CHMP6-201ENST00000325167 ANGEL1Q9UNK9 670 aaKnown RBP22.65■■□□□ 1.22
CHMP6-201ENST00000325167 LEMD3Q9Y2U8 911 aa22.65■■□□□ 1.22
CHMP6-201ENST00000325167 PTGER2P43116 358 aa22.65■■□□□ 1.22
CHMP6-201ENST00000325167 ST5P78524 1137 aa22.65■■□□□ 1.22
CHMP6-201ENST00000325167 AMIGO3Q86WK7 504 aa22.65■■□□□ 1.22
CHMP6-201ENST00000325167 TMEM63CQ9P1W3 806 aa22.65■■□□□ 1.22
CHMP6-201ENST00000325167 NAP1L2Q9ULW6 460 aaPredicted RBP22.65■■□□□ 1.22
CHMP6-201ENST00000325167 SALL1Q9NSC2 1324 aa22.64■■□□□ 1.21
CHMP6-201ENST00000325167 TIAM2Q8IVF5 1701 aa22.64■■□□□ 1.21
CHMP6-201ENST00000325167 GSG1L2A8MUP6 293 aa22.64■■□□□ 1.21
CHMP6-201ENST00000325167 FIBPO43427 364 aa22.64■■□□□ 1.21
CHMP6-201ENST00000325167 ANTXR2P58335 489 aa22.64■■□□□ 1.21
CHMP6-201ENST00000325167 ATL3Q6DD88 541 aa22.64■■□□□ 1.21
CHMP6-201ENST00000325167 LRSAM1Q6UWE0 723 aa22.64■■□□□ 1.21
CHMP6-201ENST00000325167 GAS2L3Q86XJ1 694 aa22.64■■□□□ 1.21
CHMP6-201ENST00000325167 TBC1D10CQ8IV04 446 aa22.64■■□□□ 1.21
CHMP6-201ENST00000325167 GDPD2Q9HCC8 539 aa22.64■■□□□ 1.21
CHMP6-201ENST00000325167 ABCF2Q9UG63 623 aa22.64■■□□□ 1.21
CHMP6-201ENST00000325167 SLC4A4Q9Y6R1 1079 aa22.64■■□□□ 1.21
CHMP6-201ENST00000325167 UBR3Q6ZT12 1888 aa22.64■■□□□ 1.21
CHMP6-201ENST00000325167 MAGEB6P1A0A0J9YX57 407 aa22.63■■□□□ 1.21
CHMP6-201ENST00000325167 KLF18A0A0U1RQI7 1052 aa22.63■■□□□ 1.21
CHMP6-201ENST00000325167 TDO2P48775 406 aa22.63■■□□□ 1.21
CHMP6-201ENST00000325167 CHST3Q7LGC8 479 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms