RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 ILDR1Q86SU0 546 aaPredicted RBP25.09■■□□□ 1.61
LIMS2-201ENST00000324938 FAM200AQ8TCP9 573 aa25.09■■□□□ 1.61
LIMS2-201ENST00000324938 STRBPQ96SI9 672 aaKnown RBP25.09■■□□□ 1.61
LIMS2-201ENST00000324938 ECM29Q5VYK3 1845 aa25.08■■□□□ 1.61
LIMS2-201ENST00000324938 OFD1O75665 1012 aa25.08■■□□□ 1.61
LIMS2-201ENST00000324938 AIDAQ96BJ3 306 aa25.08■■□□□ 1.61
LIMS2-201ENST00000324938 USP28Q96RU2 1077 aa25.08■■□□□ 1.61
LIMS2-201ENST00000324938 ANO8Q9HCE9 1232 aaPredicted RBP25.08■■□□□ 1.61
LIMS2-201ENST00000324938 IGHMBP2P38935 993 aaKnown RBP25.07■■□□□ 1.6
LIMS2-201ENST00000324938 PPFIA3O75145 1194 aa25.07■■□□□ 1.6
LIMS2-201ENST00000324938 APPP05067 770 aa25.07■■□□□ 1.6
LIMS2-201ENST00000324938 GUCY1B3Q02153 619 aa25.07■■□□□ 1.6
LIMS2-201ENST00000324938 MAP3K12Q12852 859 aa25.07■■□□□ 1.6
LIMS2-201ENST00000324938 CKAP2LQ8IYA6 745 aa25.07■■□□□ 1.6
LIMS2-201ENST00000324938 ANGEL1Q9UNK9 670 aaKnown RBP25.07■■□□□ 1.6
LIMS2-201ENST00000324938 BCL9LQ86UU0 1499 aa25.07■■□□□ 1.6
LIMS2-201ENST00000324938 CEBPZQ03701 1054 aaKnown RBP25.06■■□□□ 1.6
LIMS2-201ENST00000324938 FTOQ9C0B1 505 aaKnown RBP eCLIP25.06■■□□□ 1.6
LIMS2-201ENST00000324938 ZNF652Q9Y2D9 606 aa25.06■■□□□ 1.6
LIMS2-201ENST00000324938 COL4A1P02462 1669 aa25.06■■□□□ 1.6
LIMS2-201ENST00000324938 SNAP23O00161 211 aa25.06■■□□□ 1.6
LIMS2-201ENST00000324938 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.06■■□□□ 1.6
LIMS2-201ENST00000324938 SCN7AQ01118 1682 aa25.06■■□□□ 1.6
LIMS2-201ENST00000324938 NUTM2BA6NNL0 878 aaPredicted RBP25.05■■□□□ 1.6
LIMS2-201ENST00000324938 NUTM2EB1AL46 878 aaPredicted RBP25.05■■□□□ 1.6
LIMS2-201ENST00000324938 CYB5R4Q7L1T6 521 aa25.05■■□□□ 1.6
LIMS2-201ENST00000324938 NUTM2AQ8IVF1 878 aaPredicted RBP25.05■■□□□ 1.6
LIMS2-201ENST00000324938 MAGEB6Q8N7X4 407 aa25.05■■□□□ 1.6
LIMS2-201ENST00000324938 ORC3Q9UBD5 711 aaPredicted RBP25.05■■□□□ 1.6
LIMS2-201ENST00000324938 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.05■■□□□ 1.6
LIMS2-201ENST00000324938 SH2B2O14492 632 aaPredicted RBP25.04■■□□□ 1.6
LIMS2-201ENST00000324938 RGS22Q8NE09 1264 aa25.04■■□□□ 1.6
LIMS2-201ENST00000324938 C8orf76Q96K31 380 aa25.04■■□□□ 1.6
LIMS2-201ENST00000324938 DENND2AQ9ULE3 1009 aa25.04■■□□□ 1.6
LIMS2-201ENST00000324938 CPLX1O14810 134 aa25.04■■□□□ 1.6
LIMS2-201ENST00000324938 PATL2C9JE40 543 aaKnown RBP25.03■■□□□ 1.6
LIMS2-201ENST00000324938 FBXO18Q8NFZ0 1043 aa25.03■■□□□ 1.6
LIMS2-201ENST00000324938 EPB41L4AQ9HCS5 686 aaPredicted RBP25.03■■□□□ 1.6
LIMS2-201ENST00000324938 AP5Z1O43299 807 aa25.03■■□□□ 1.6
LIMS2-201ENST00000324938 MBD4O95243 580 aa25.03■■□□□ 1.6
LIMS2-201ENST00000324938 CLEC4GQ6UXB4 293 aa25.03■■□□□ 1.6
LIMS2-201ENST00000324938 TMEM87BQ96K49 555 aa25.03■■□□□ 1.6
LIMS2-201ENST00000324938 NEDD4P46934 1319 aa25.02■■□□□ 1.6
LIMS2-201ENST00000324938 KCNQ2O43526 872 aa25.02■■□□□ 1.6
LIMS2-201ENST00000324938 ANO6Q4KMQ2 910 aa25.02■■□□□ 1.6
LIMS2-201ENST00000324938 CCAR1Q8IX12 1150 aaKnown RBP25.02■■□□□ 1.6
LIMS2-201ENST00000324938 NKX2-3Q8TAU0 364 aa25.02■■□□□ 1.6
LIMS2-201ENST00000324938 TAF1P21675 1872 aa25.01■■□□□ 1.59
LIMS2-201ENST00000324938 CHRNDQ07001 517 aa25.01■■□□□ 1.59
LIMS2-201ENST00000324938 RAB11FIP4Q86YS3 637 aa25.01■■□□□ 1.59
LIMS2-201ENST00000324938 IFNL3Q8IZI9 196 aa25.01■■□□□ 1.59
LIMS2-201ENST00000324938 RTEL1Q9NZ71 1219 aa25.01■■□□□ 1.59
LIMS2-201ENST00000324938 B4E1Z4 1266 aa25.01■■□□□ 1.59
LIMS2-201ENST00000324938 BCAMP50895 628 aa25.01■■□□□ 1.59
LIMS2-201ENST00000324938 SASS6Q6UVJ0 657 aa25.01■■□□□ 1.59
LIMS2-201ENST00000324938 CDC5LQ99459 802 aaKnown RBP25.01■■□□□ 1.59
LIMS2-201ENST00000324938 CTAGE5O15320 804 aa25■■□□□ 1.59
LIMS2-201ENST00000324938 BRAPQ7Z569 592 aa25■■□□□ 1.59
LIMS2-201ENST00000324938 NAPBQ9H115 298 aa25■■□□□ 1.59
LIMS2-201ENST00000324938 GOLPH3LQ9H4A5 285 aa25■■□□□ 1.59
LIMS2-201ENST00000324938 OTUD7BQ6GQQ9 843 aa25■■□□□ 1.59
LIMS2-201ENST00000324938 APOA5Q6Q788 366 aa25■■□□□ 1.59
LIMS2-201ENST00000324938 CCDC73Q6ZRK6 1079 aa25■■□□□ 1.59
LIMS2-201ENST00000324938 ARMT1Q9H993 441 aa25■■□□□ 1.59
LIMS2-201ENST00000324938 CBX8Q9HC52 389 aa25■■□□□ 1.59
LIMS2-201ENST00000324938 PNPLA7Q6ZV29 1317 aa24.99■■□□□ 1.59
LIMS2-201ENST00000324938 METAP2P50579 478 aaKnown RBP eCLIP24.99■■□□□ 1.59
LIMS2-201ENST00000324938 GNAT2P19087 354 aa24.98■■□□□ 1.59
LIMS2-201ENST00000324938 PLCB2Q00722 1185 aa24.98■■□□□ 1.59
LIMS2-201ENST00000324938 SNW1Q13573 536 aaKnown RBP24.98■■□□□ 1.59
LIMS2-201ENST00000324938 LUZP1Q86V48 1076 aa24.98■■□□□ 1.59
LIMS2-201ENST00000324938 SGMS1Q86VZ5 419 aa24.98■■□□□ 1.59
LIMS2-201ENST00000324938 LINC00116Q8NCU8 138 aa24.98■■□□□ 1.59
LIMS2-201ENST00000324938 ENGASEQ8NFI3 743 aa24.98■■□□□ 1.59
LIMS2-201ENST00000324938 IGDCC4Q8TDY8 1250 aa24.98■■□□□ 1.59
LIMS2-201ENST00000324938 GSG1L2A8MUP6 293 aa24.98■■□□□ 1.59
LIMS2-201ENST00000324938 CDKL5O76039 1030 aa24.98■■□□□ 1.59
LIMS2-201ENST00000324938 CAVIN2O95810 425 aa24.98■■□□□ 1.59
LIMS2-201ENST00000324938 ME1P48163 572 aa24.98■■□□□ 1.59
LIMS2-201ENST00000324938 FAM160A1Q05DH4 1040 aa24.98■■□□□ 1.59
LIMS2-201ENST00000324938 KIAA2012Q0VF49 1180 aa24.98■■□□□ 1.59
LIMS2-201ENST00000324938 LY9Q9HBG7 655 aa24.97■■□□□ 1.59
LIMS2-201ENST00000324938 POLR3EQ9NVU0 708 aa24.97■■□□□ 1.59
LIMS2-201ENST00000324938 ZNF804BA4D1E1 1349 aa24.97■■□□□ 1.59
LIMS2-201ENST00000324938 RGL2O15211 777 aa24.97■■□□□ 1.59
LIMS2-201ENST00000324938 YEATS4O95619 227 aa24.97■■□□□ 1.59
LIMS2-201ENST00000324938 CNNM2Q9H8M5 875 aa24.97■■□□□ 1.59
LIMS2-201ENST00000324938 COL24A1Q17RW2 1714 aa24.96■■□□□ 1.59
LIMS2-201ENST00000324938 SF3B3Q15393 1217 aaKnown RBP24.96■■□□□ 1.59
LIMS2-201ENST00000324938 MYSM1Q5VVJ2 828 aa24.96■■□□□ 1.59
LIMS2-201ENST00000324938 LINC00301Q8NCQ3 95 aa24.96■■□□□ 1.59
LIMS2-201ENST00000324938 TDRD7Q8NHU6 1098 aaKnown RBP24.96■■□□□ 1.59
LIMS2-201ENST00000324938 CNTNAP4Q9C0A0 1308 aa24.96■■□□□ 1.59
LIMS2-201ENST00000324938 A0A1W2PQ27 194 aa24.95■■□□□ 1.59
LIMS2-201ENST00000324938 A0A1W2PQ64 194 aa24.95■■□□□ 1.59
LIMS2-201ENST00000324938 A0A1W2PQD8 194 aa24.95■■□□□ 1.59
LIMS2-201ENST00000324938 LIFRP42702 1097 aa24.95■■□□□ 1.59
LIMS2-201ENST00000324938 KIF23Q02241 960 aaPredicted RBP24.95■■□□□ 1.59
LIMS2-201ENST00000324938 ERFEQ4G0M1 354 aa24.95■■□□□ 1.59
LIMS2-201ENST00000324938 ADALQ6DHV7 355 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms