RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 SPTY2D1Q68D10 685 aaPredicted RBP15.25■□□□□ 0.03
DDX39A-202ENST00000324340 ZMYND15Q9H091 742 aa15.25■□□□□ 0.03
DDX39A-202ENST00000324340 ABCF2Q9UG63 623 aa15.25■□□□□ 0.03
DDX39A-202ENST00000324340 CHD4Q14839 1912 aa15.25■□□□□ 0.03
DDX39A-202ENST00000324340 FSD2A1L4K1 749 aa15.24■□□□□ 0.03
DDX39A-202ENST00000324340 RIMBP2O15034 1052 aa15.24■□□□□ 0.03
DDX39A-202ENST00000324340 CHAF1AQ13111 956 aaPredicted RBP15.24■□□□□ 0.03
DDX39A-202ENST00000324340 PODNQ7Z5L7 613 aa15.24■□□□□ 0.03
DDX39A-202ENST00000324340 NSUN4Q96CB9 384 aaKnown RBP15.24■□□□□ 0.03
DDX39A-202ENST00000324340 VPS33BQ9H267 617 aa15.24■□□□□ 0.03
DDX39A-202ENST00000324340 RRAGDQ9NQL2 400 aaPredicted RBP15.24■□□□□ 0.03
DDX39A-202ENST00000324340 RAI14Q9P0K7 980 aa15.24■□□□□ 0.03
DDX39A-202ENST00000324340 PALD1Q9ULE6 856 aa15.24■□□□□ 0.03
DDX39A-202ENST00000324340 RBM8AQ9Y5S9 174 aaKnown RBP15.24■□□□□ 0.03
DDX39A-202ENST00000324340 ZNF646O15015 1829 aaPredicted RBP15.24■□□□□ 0.03
DDX39A-202ENST00000324340 FOXP2O15409 715 aa15.24■□□□□ 0.03
DDX39A-202ENST00000324340 GPAA1O43292 621 aa15.24■□□□□ 0.03
DDX39A-202ENST00000324340 HSPD1P10809 573 aaKnown RBP15.24■□□□□ 0.03
DDX39A-202ENST00000324340 KIAA2012Q0VF49 1180 aa15.24■□□□□ 0.03
DDX39A-202ENST00000324340 DALRD3Q5D0E6 543 aaKnown RBP15.24■□□□□ 0.03
DDX39A-202ENST00000324340 ZNF384Q8TF68 577 aa15.24■□□□□ 0.03
DDX39A-202ENST00000324340 TBC1D22AQ8WUA7 517 aa15.24■□□□□ 0.03
DDX39A-202ENST00000324340 ZNF219Q9P2Y4 722 aaPredicted RBP15.24■□□□□ 0.03
DDX39A-202ENST00000324340 U3KPZ7 1027 aaPredicted RBP15.24■□□□□ 0.03
DDX39A-202ENST00000324340 FER1L6Q2WGJ9 1857 aa15.23■□□□□ 0.03
DDX39A-202ENST00000324340 TPM2P07951 284 aa15.23■□□□□ 0.03
DDX39A-202ENST00000324340 PRDX5P30044 214 aa15.23■□□□□ 0.03
DDX39A-202ENST00000324340 MECOMQ03112 1051 aa15.23■□□□□ 0.03
DDX39A-202ENST00000324340 RABEP1Q15276 862 aa15.23■□□□□ 0.03
DDX39A-202ENST00000324340 STRBPQ96SI9 672 aaKnown RBP15.23■□□□□ 0.03
DDX39A-202ENST00000324340 ARFGEF1Q9Y6D6 1849 aa15.22■□□□□ 0.03
DDX39A-202ENST00000324340 CYP7A1P22680 504 aa15.22■□□□□ 0.03
DDX39A-202ENST00000324340 TSGA10IPQ3SY00 556 aa15.22■□□□□ 0.03
DDX39A-202ENST00000324340 VPS53Q5VIR6 699 aa15.22■□□□□ 0.03
DDX39A-202ENST00000324340 NAA16Q6N069 864 aaPredicted RBP15.22■□□□□ 0.03
DDX39A-202ENST00000324340 ADGRA1Q86SQ6 560 aa15.22■□□□□ 0.03
DDX39A-202ENST00000324340 SUGT1Q9Y2Z0 365 aa15.22■□□□□ 0.03
DDX39A-202ENST00000324340 SNX14Q9Y5W7 946 aa15.22■□□□□ 0.03
DDX39A-202ENST00000324340 PSME4Q14997 1843 aa15.21■□□□□ 0.03
DDX39A-202ENST00000324340 LDHBP07195 334 aaKnown RBP15.21■□□□□ 0.02
DDX39A-202ENST00000324340 FKBP1AP62942 108 aaKnown RBP15.21■□□□□ 0.02
DDX39A-202ENST00000324340 DOK7Q18PE1 504 aa15.21■□□□□ 0.02
DDX39A-202ENST00000324340 RNF20Q5VTR2 975 aa15.21■□□□□ 0.02
DDX39A-202ENST00000324340 CREB3L3Q68CJ9 461 aa15.21■□□□□ 0.02
DDX39A-202ENST00000324340 RASEFQ8IZ41 740 aa15.21■□□□□ 0.02
DDX39A-202ENST00000324340 AIDAQ96BJ3 306 aa15.21■□□□□ 0.02
DDX39A-202ENST00000324340 RIOK1Q9BRS2 568 aaKnown RBP15.21■□□□□ 0.02
DDX39A-202ENST00000324340 PPP1R1BQ9UD71 204 aaPredicted RBP15.21■□□□□ 0.02
DDX39A-202ENST00000324340 JAG2Q9Y219 1238 aa15.21■□□□□ 0.02
DDX39A-202ENST00000324340 ZMYM6O95789 1325 aa15.2■□□□□ 0.02
DDX39A-202ENST00000324340 RPAP1Q9BWH6 1393 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-202ENST00000324340 SCN9AQ15858 1988 aa15.2■□□□□ 0.02
DDX39A-202ENST00000324340 SLC27A2O14975 620 aa15.2■□□□□ 0.02
DDX39A-202ENST00000324340 MBD4O95243 580 aa15.2■□□□□ 0.02
DDX39A-202ENST00000324340 GNAT2P19087 354 aa15.2■□□□□ 0.02
DDX39A-202ENST00000324340 GTF2IP78347 998 aa15.2■□□□□ 0.02
DDX39A-202ENST00000324340 AOC3Q16853 763 aa15.2■□□□□ 0.02
DDX39A-202ENST00000324340 MFSD14BQ5SR56 506 aa15.2■□□□□ 0.02
DDX39A-202ENST00000324340 SNX21Q969T3 373 aa15.2■□□□□ 0.02
DDX39A-202ENST00000324340 MAGEB6P1A0A0J9YX57 407 aa15.19■□□□□ 0.02
DDX39A-202ENST00000324340 GOLGA6L3A6NEY3 463 aa15.19■□□□□ 0.02
DDX39A-202ENST00000324340 G3V3G9 751 aa15.19■□□□□ 0.02
DDX39A-202ENST00000324340 ECE2O60344 883 aa15.19■□□□□ 0.02
DDX39A-202ENST00000324340 ZKSCAN1P17029 563 aaPredicted RBP15.19■□□□□ 0.02
DDX39A-202ENST00000324340 GSTO1P78417 241 aa15.19■□□□□ 0.02
DDX39A-202ENST00000324340 ALX1Q15699 326 aa15.19■□□□□ 0.02
DDX39A-202ENST00000324340 GRIK5Q16478 980 aa15.19■□□□□ 0.02
DDX39A-202ENST00000324340 DCAF8Q5TAQ9 597 aa15.19■□□□□ 0.02
DDX39A-202ENST00000324340 TTLL5Q6EMB2 1281 aa15.19■□□□□ 0.02
DDX39A-202ENST00000324340 DZIP1Q86YF9 867 aaKnown RBP15.19■□□□□ 0.02
DDX39A-202ENST00000324340 TM6SF1Q9BZW5 370 aa15.19■□□□□ 0.02
DDX39A-202ENST00000324340 DBNDD1Q9H9R9 158 aa15.19■□□□□ 0.02
DDX39A-202ENST00000324340 CTNNA3Q9UI47 895 aa15.19■□□□□ 0.02
DDX39A-202ENST00000324340 LAMA4Q16363 1823 aa15.18■□□□□ 0.02
DDX39A-202ENST00000324340 PATL2C9JE40 543 aaKnown RBP15.18■□□□□ 0.02
DDX39A-202ENST00000324340 PPIP5K2O43314 1243 aa15.18■□□□□ 0.02
DDX39A-202ENST00000324340 MRE11P49959 708 aa15.18■□□□□ 0.02
DDX39A-202ENST00000324340 STRIP1Q5VSL9 837 aa15.18■□□□□ 0.02
DDX39A-202ENST00000324340 KLHL34Q8N239 644 aa15.18■□□□□ 0.02
DDX39A-202ENST00000324340 LCORLQ8N3X6 602 aa15.18■□□□□ 0.02
DDX39A-202ENST00000324340 NLGN2Q8NFZ4 835 aa15.18■□□□□ 0.02
DDX39A-202ENST00000324340 FAM163AQ96GL9 167 aaPredicted RBP15.18■□□□□ 0.02
DDX39A-202ENST00000324340 ARMT1Q9H993 441 aa15.18■□□□□ 0.02
DDX39A-202ENST00000324340 LTBP3Q9NS15 1303 aa15.18■□□□□ 0.02
DDX39A-202ENST00000324340 COL4A5P29400 1685 aa15.18■□□□□ 0.02
DDX39A-202ENST00000324340 FGAP02671 866 aa15.17■□□□□ 0.02
DDX39A-202ENST00000324340 LDHCP07864 332 aa15.17■□□□□ 0.02
DDX39A-202ENST00000324340 CYP21A2P08686 494 aa15.17■□□□□ 0.02
DDX39A-202ENST00000324340 TERF1P54274 439 aa15.17■□□□□ 0.02
DDX39A-202ENST00000324340 CERS5Q8N5B7 392 aa15.17■□□□□ 0.02
DDX39A-202ENST00000324340 MIGA1Q8NAN2 632 aa15.17■□□□□ 0.02
DDX39A-202ENST00000324340 MYH2Q9UKX2 1941 aa15.17■□□□□ 0.02
DDX39A-202ENST00000324340 YDJCA8MPS7 323 aa15.16■□□□□ 0.02
DDX39A-202ENST00000324340 GSG1L2A8MUP6 293 aa15.16■□□□□ 0.02
DDX39A-202ENST00000324340 PPP4CP60510 307 aa15.16■□□□□ 0.02
DDX39A-202ENST00000324340 KRT32Q14532 448 aa15.16■□□□□ 0.02
DDX39A-202ENST00000324340 DACT2Q5SW24 774 aa15.16■□□□□ 0.02
DDX39A-202ENST00000324340 CERS3Q8IU89 383 aa15.16■□□□□ 0.02
DDX39A-202ENST00000324340 SLF2Q8IX21 1173 aa15.16■□□□□ 0.02
DDX39A-202ENST00000324340 TBC1D2Q9BYX2 928 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms