RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 TRPC5Q9UL62 973 aaPredicted RBP16.37■□□□□ 0.21
VAMP2-201ENST00000316509 MINPP1Q9UNW1 487 aa16.37■□□□□ 0.21
VAMP2-201ENST00000316509 DOCK2Q92608 1830 aa16.37■□□□□ 0.21
VAMP2-201ENST00000316509 BTAF1O14981 1849 aa16.36■□□□□ 0.21
VAMP2-201ENST00000316509 GNPATO15228 680 aa16.36■□□□□ 0.21
VAMP2-201ENST00000316509 CTDNEP1O95476 244 aa16.36■□□□□ 0.21
VAMP2-201ENST00000316509 ADRA2BP18089 450 aa16.36■□□□□ 0.21
VAMP2-201ENST00000316509 HAND2P61296 217 aa16.36■□□□□ 0.21
VAMP2-201ENST00000316509 RPS8P62241 208 aaKnown RBP16.36■□□□□ 0.21
VAMP2-201ENST00000316509 NBPF5PQ86XG9 351 aaPredicted RBP16.36■□□□□ 0.21
VAMP2-201ENST00000316509 IFNL3Q8IZI9 196 aa16.36■□□□□ 0.21
VAMP2-201ENST00000316509 SPATA32Q96LK8 384 aa16.35■□□□□ 0.21
VAMP2-201ENST00000316509 KRT23Q9C075 422 aa16.35■□□□□ 0.21
VAMP2-201ENST00000316509 NAPBQ9H115 298 aa16.35■□□□□ 0.21
VAMP2-201ENST00000316509 LRP2BPQ9P2M1 347 aa16.35■□□□□ 0.21
VAMP2-201ENST00000316509 ANGEL1Q9UNK9 670 aaKnown RBP16.35■□□□□ 0.21
VAMP2-201ENST00000316509 ANTXR2P58335 489 aa16.34■□□□□ 0.21
VAMP2-201ENST00000316509 COL24A1Q17RW2 1714 aa16.34■□□□□ 0.21
VAMP2-201ENST00000316509 TRAPPC3LQ5T215 181 aa16.34■□□□□ 0.21
VAMP2-201ENST00000316509 TTC6Q86TZ1 520 aa16.34■□□□□ 0.21
VAMP2-201ENST00000316509 TRIM44Q96DX7 344 aaPredicted RBP16.34■□□□□ 0.21
VAMP2-201ENST00000316509 DDX11Q96FC9 970 aa16.34■□□□□ 0.21
VAMP2-201ENST00000316509 ZNF396Q96N95 335 aaPredicted RBP16.34■□□□□ 0.21
VAMP2-201ENST00000316509 BCL11BQ9C0K0 894 aaPredicted RBP16.34■□□□□ 0.21
VAMP2-201ENST00000316509 MBD4O95243 580 aa16.34■□□□□ 0.21
VAMP2-201ENST00000316509 CCT2P78371 535 aaKnown RBP16.34■□□□□ 0.21
VAMP2-201ENST00000316509 HS1BP3Q53T59 392 aa16.34■□□□□ 0.21
VAMP2-201ENST00000316509 FBXO33Q7Z6M2 555 aa16.34■□□□□ 0.21
VAMP2-201ENST00000316509 FERMT3Q86UX7 667 aa16.34■□□□□ 0.21
VAMP2-201ENST00000316509 ARHGEF1Q92888 912 aaKnown RBP16.34■□□□□ 0.21
VAMP2-201ENST00000316509 KLF18A0A0U1RQI7 1052 aa16.33■□□□□ 0.2
VAMP2-201ENST00000316509 GOLGA6L4A6NEF3 574 aa16.33■□□□□ 0.2
VAMP2-201ENST00000316509 CDKL5O76039 1030 aa16.33■□□□□ 0.2
VAMP2-201ENST00000316509 LIFRP42702 1097 aa16.33■□□□□ 0.2
VAMP2-201ENST00000316509 CPLX2Q6PUV4 134 aaKnown RBP16.33■□□□□ 0.2
VAMP2-201ENST00000316509 LEO1Q8WVC0 666 aaPredicted RBP16.33■□□□□ 0.2
VAMP2-201ENST00000316509 NBPF3Q9H094 633 aa16.33■□□□□ 0.2
VAMP2-201ENST00000316509 RNF41Q9H4P4 317 aaPredicted RBP16.33■□□□□ 0.2
VAMP2-201ENST00000316509 LY75O60449 1722 aa16.33■□□□□ 0.2
VAMP2-201ENST00000316509 GSG1L2A8MUP6 293 aa16.33■□□□□ 0.2
VAMP2-201ENST00000316509 RFC4P35249 363 aa16.33■□□□□ 0.2
VAMP2-201ENST00000316509 BICDL1Q6ZP65 573 aa16.33■□□□□ 0.2
VAMP2-201ENST00000316509 CHST3Q7LGC8 479 aa16.33■□□□□ 0.2
VAMP2-201ENST00000316509 SGMS1Q86VZ5 419 aa16.33■□□□□ 0.2
VAMP2-201ENST00000316509 NAP1L2Q9ULW6 460 aaPredicted RBP16.33■□□□□ 0.2
VAMP2-201ENST00000316509 SH2B2O14492 632 aaPredicted RBP16.32■□□□□ 0.2
VAMP2-201ENST00000316509 C3orf67Q6ZVT6 689 aa16.32■□□□□ 0.2
VAMP2-201ENST00000316509 PTF1AQ7RTS3 328 aa16.32■□□□□ 0.2
VAMP2-201ENST00000316509 VPS37DQ86XT2 251 aa16.32■□□□□ 0.2
VAMP2-201ENST00000316509 TBC1D10CQ8IV04 446 aa16.32■□□□□ 0.2
VAMP2-201ENST00000316509 TMTC2Q8N394 836 aa16.32■□□□□ 0.2
VAMP2-201ENST00000316509 AFF2P51816 1311 aa16.32■□□□□ 0.2
VAMP2-201ENST00000316509 TCHHQ07283 1943 aa16.32■□□□□ 0.2
VAMP2-201ENST00000316509 SNAP23O00161 211 aa16.31■□□□□ 0.2
VAMP2-201ENST00000316509 CPLX1O14810 134 aa16.31■□□□□ 0.2
VAMP2-201ENST00000316509 AKNAD1Q5T1N1 836 aa16.31■□□□□ 0.2
VAMP2-201ENST00000316509 STAG1Q8WVM7 1258 aa16.31■□□□□ 0.2
VAMP2-201ENST00000316509 CELF1Q92879 486 aaKnown RBP16.31■□□□□ 0.2
VAMP2-201ENST00000316509 FAM84BQ96KN1 310 aaPredicted RBP16.31■□□□□ 0.2
VAMP2-201ENST00000316509 DDX19AQ9NUU7 478 aaKnown RBP16.31■□□□□ 0.2
VAMP2-201ENST00000316509 SRP68Q9UHB9 627 aaKnown RBP16.31■□□□□ 0.2
VAMP2-201ENST00000316509 RCOR1Q9UKL0 485 aa16.31■□□□□ 0.2
VAMP2-201ENST00000316509 HPS5Q9UPZ3 1129 aa16.31■□□□□ 0.2
VAMP2-201ENST00000316509 GOLGA8BA8MQT2 603 aa16.31■□□□□ 0.2
VAMP2-201ENST00000316509 PCP11498 1178 aaKnown RBP16.31■□□□□ 0.2
VAMP2-201ENST00000316509 CYP7A1P22680 504 aa16.31■□□□□ 0.2
VAMP2-201ENST00000316509 GIMAP6Q6P9H5 292 aa16.31■□□□□ 0.2
VAMP2-201ENST00000316509 PDLIM2Q96JY6 352 aa16.31■□□□□ 0.2
VAMP2-201ENST00000316509 ARMT1Q9H993 441 aa16.31■□□□□ 0.2
VAMP2-201ENST00000316509 SLC4A4Q9Y6R1 1079 aa16.31■□□□□ 0.2
VAMP2-201ENST00000316509 RCAN1P53805 252 aa16.3■□□□□ 0.2
VAMP2-201ENST00000316509 KCNQ4P56696 695 aa16.3■□□□□ 0.2
VAMP2-201ENST00000316509 MFSD6Q6ZSS7 791 aa16.3■□□□□ 0.2
VAMP2-201ENST00000316509 SEPT12Q8IYM1 358 aa16.3■□□□□ 0.2
VAMP2-201ENST00000316509 IGDCC4Q8TDY8 1250 aa16.3■□□□□ 0.2
VAMP2-201ENST00000316509 NCOA5Q9HCD5 579 aaKnown RBP16.3■□□□□ 0.2
VAMP2-201ENST00000316509 ANAPC4Q9UJX5 808 aa16.3■□□□□ 0.2
VAMP2-201ENST00000316509 MAGEB6P1A0A0J9YX57 407 aa16.3■□□□□ 0.2
VAMP2-201ENST00000316509 FDPSP14324 419 aaKnown RBP16.3■□□□□ 0.2
VAMP2-201ENST00000316509 SLC27A3Q5K4L6 730 aa16.3■□□□□ 0.2
VAMP2-201ENST00000316509 EPB41L4AQ9HCS5 686 aaPredicted RBP16.3■□□□□ 0.2
VAMP2-201ENST00000316509 GYG1P46976 350 aa16.29■□□□□ 0.2
VAMP2-201ENST00000316509 TDO2P48775 406 aa16.29■□□□□ 0.2
VAMP2-201ENST00000316509 SART3Q15020 963 aaKnown RBP16.29■□□□□ 0.2
VAMP2-201ENST00000316509 CYB5R4Q7L1T6 521 aa16.29■□□□□ 0.2
VAMP2-201ENST00000316509 RAI14Q9P0K7 980 aa16.29■□□□□ 0.2
VAMP2-201ENST00000316509 TIAM2Q8IVF5 1701 aa16.29■□□□□ 0.2
VAMP2-201ENST00000316509 TM4SF1P30408 202 aa16.28■□□□□ 0.2
VAMP2-201ENST00000316509 HIBADHP31937 336 aaKnown RBP16.28■□□□□ 0.2
VAMP2-201ENST00000316509 ADD1P35611 737 aaKnown RBP16.28■□□□□ 0.2
VAMP2-201ENST00000316509 NT5C2P49902 561 aa16.28■□□□□ 0.2
VAMP2-201ENST00000316509 SYNE3Q6ZMZ3 975 aa16.28■□□□□ 0.2
VAMP2-201ENST00000316509 BRAPQ7Z569 592 aa16.28■□□□□ 0.2
VAMP2-201ENST00000316509 LCORLQ8N3X6 602 aa16.28■□□□□ 0.2
VAMP2-201ENST00000316509 C8orf76Q96K31 380 aa16.28■□□□□ 0.2
VAMP2-201ENST00000316509 TFIP11Q9UBB9 837 aaKnown RBP16.28■□□□□ 0.2
VAMP2-201ENST00000316509 ORC3Q9UBD5 711 aaPredicted RBP16.28■□□□□ 0.2
VAMP2-201ENST00000316509 NID2Q14112 1375 aa16.28■□□□□ 0.2
VAMP2-201ENST00000316509 B4E1Z4 1266 aa16.28■□□□□ 0.2
VAMP2-201ENST00000316509 METAP2P50579 478 aaKnown RBP eCLIP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms