RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 INHBEP58166 350 aa21.96■■□□□ 1.11
EXOSC4-201ENST00000316052 TEPSINQ96N21 525 aa21.96■■□□□ 1.11
EXOSC4-201ENST00000316052 IGF2BP3O00425 579 aaKnown RBP eCLIP21.95■■□□□ 1.1
EXOSC4-201ENST00000316052 PDE8BO95263 885 aa21.95■■□□□ 1.1
EXOSC4-201ENST00000316052 IREB2P48200 963 aaKnown RBP21.95■■□□□ 1.1
EXOSC4-201ENST00000316052 CHAF1AQ13111 956 aaPredicted RBP21.95■■□□□ 1.1
EXOSC4-201ENST00000316052 VPS37DQ86XT2 251 aa21.95■■□□□ 1.1
EXOSC4-201ENST00000316052 ALDH1A1P00352 501 aa21.94■■□□□ 1.1
EXOSC4-201ENST00000316052 BCAMP50895 628 aa21.94■■□□□ 1.1
EXOSC4-201ENST00000316052 CDCA7LQ96GN5 454 aa21.94■■□□□ 1.1
EXOSC4-201ENST00000316052 ARAP2Q8WZ64 1704 aa21.94■■□□□ 1.1
EXOSC4-201ENST00000316052 TCP10L2B9ZVM9 353 aa21.93■■□□□ 1.1
EXOSC4-201ENST00000316052 LAMB1P07942 1786 aa21.93■■□□□ 1.1
EXOSC4-201ENST00000316052 TNFAIP1Q13829 316 aa21.93■■□□□ 1.1
EXOSC4-201ENST00000316052 CAVIN4Q5BKX8 364 aa21.93■■□□□ 1.1
EXOSC4-201ENST00000316052 ANKRD13AQ8IZ07 590 aa21.93■■□□□ 1.1
EXOSC4-201ENST00000316052 TMEM39BQ9GZU3 492 aa21.93■■□□□ 1.1
EXOSC4-201ENST00000316052 FBXO46Q6PJ61 603 aaPredicted RBP21.92■■□□□ 1.1
EXOSC4-201ENST00000316052 OTOFQ9HC10 1997 aa21.92■■□□□ 1.1
EXOSC4-201ENST00000316052 FRAT2O75474 233 aaPredicted RBP21.91■■□□□ 1.1
EXOSC4-201ENST00000316052 FGFR2P21802 821 aa21.91■■□□□ 1.1
EXOSC4-201ENST00000316052 RFX5P48382 616 aaPredicted RBP21.91■■□□□ 1.1
EXOSC4-201ENST00000316052 PTPN18Q99952 460 aa21.91■■□□□ 1.1
EXOSC4-201ENST00000316052 ELP3Q9H9T3 547 aa21.91■■□□□ 1.1
EXOSC4-201ENST00000316052 MKI67P46013 3256 aaKnown RBP21.9■■□□□ 1.1
EXOSC4-201ENST00000316052 HDLBPQ00341 1268 aaKnown RBP21.9■■□□□ 1.1
EXOSC4-201ENST00000316052 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.9■■□□□ 1.1
EXOSC4-201ENST00000316052 TBC1D22AQ8WUA7 517 aa21.9■■□□□ 1.1
EXOSC4-201ENST00000316052 TESPA1A2RU30 521 aaPredicted RBP21.89■■□□□ 1.09
EXOSC4-201ENST00000316052 CACNB3P54284 484 aa21.89■■□□□ 1.09
EXOSC4-201ENST00000316052 ALDH1L2Q3SY69 923 aa21.89■■□□□ 1.09
EXOSC4-201ENST00000316052 TRMT2AQ8IZ69 625 aaKnown RBP21.89■■□□□ 1.09
EXOSC4-201ENST00000316052 CNKSR2Q8WXI2 1034 aa21.89■■□□□ 1.09
EXOSC4-201ENST00000316052 OPTNQ96CV9 577 aa21.89■■□□□ 1.09
EXOSC4-201ENST00000316052 EYA2O00167 538 aa21.88■■□□□ 1.09
EXOSC4-201ENST00000316052 CRHR2Q13324 411 aa21.88■■□□□ 1.09
EXOSC4-201ENST00000316052 PUM3Q15397 648 aaKnown RBP21.88■■□□□ 1.09
EXOSC4-201ENST00000316052 TEKT1Q969V4 418 aa21.88■■□□□ 1.09
EXOSC4-201ENST00000316052 MS4A4AQ96JQ5 239 aa21.88■■□□□ 1.09
EXOSC4-201ENST00000316052 MRIQ9BWK5 157 aa21.88■■□□□ 1.09
EXOSC4-201ENST00000316052 TNNI2P48788 182 aa21.87■■□□□ 1.09
EXOSC4-201ENST00000316052 MAP3K9P80192 1104 aa21.87■■□□□ 1.09
EXOSC4-201ENST00000316052 APOBEC3HQ6NTF7 200 aaKnown RBP21.87■■□□□ 1.09
EXOSC4-201ENST00000316052 ATG9AQ7Z3C6 839 aa21.87■■□□□ 1.09
EXOSC4-201ENST00000316052 ZDHHC15Q96MV8 337 aa21.87■■□□□ 1.09
EXOSC4-201ENST00000316052 SMC4Q9NTJ3 1288 aa21.87■■□□□ 1.09
EXOSC4-201ENST00000316052 KIF16BQ96L93 1317 aa21.86■■□□□ 1.09
EXOSC4-201ENST00000316052 KIAA0100Q14667 2235 aaKnown RBP21.86■■□□□ 1.09
EXOSC4-201ENST00000316052 SLC34A2O95436 690 aa21.86■■□□□ 1.09
EXOSC4-201ENST00000316052 IFIT1P09914 478 aaKnown RBP21.86■■□□□ 1.09
EXOSC4-201ENST00000316052 VGLL4Q14135 290 aa21.86■■□□□ 1.09
EXOSC4-201ENST00000316052 OTUD7BQ6GQQ9 843 aa21.86■■□□□ 1.09
EXOSC4-201ENST00000316052 OTOP1Q7RTM1 612 aa21.86■■□□□ 1.09
EXOSC4-201ENST00000316052 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.86■■□□□ 1.091e-6■■■■□ 24.1
EXOSC4-201ENST00000316052 TRIM17Q9Y577 477 aa21.86■■□□□ 1.09
EXOSC4-201ENST00000316052 BRCA2P51587 3418 aa21.84■■□□□ 1.09
EXOSC4-201ENST00000316052 CAP1Q01518 475 aa21.84■■□□□ 1.09
EXOSC4-201ENST00000316052 BRI3BPQ8WY22 251 aa21.84■■□□□ 1.09
EXOSC4-201ENST00000316052 LPIN2Q92539 896 aa21.84■■□□□ 1.09
EXOSC4-201ENST00000316052 NOB1Q9ULX3 412 aaKnown RBP21.84■■□□□ 1.09
EXOSC4-201ENST00000316052 SUGT1Q9Y2Z0 365 aa21.84■■□□□ 1.09
EXOSC4-201ENST00000316052 SLC5A1P13866 664 aa21.83■■□□□ 1.09
EXOSC4-201ENST00000316052 HHIPL2Q6UWX4 724 aa21.83■■□□□ 1.09
EXOSC4-201ENST00000316052 CD99L2Q8TCZ2 262 aa21.83■■□□□ 1.09
EXOSC4-201ENST00000316052 UBTFL1P0CB47 393 aaPredicted RBP21.82■■□□□ 1.08
EXOSC4-201ENST00000316052 FKBP1CQ5VVH2 108 aa21.82■■□□□ 1.08
EXOSC4-201ENST00000316052 FAM83AQ86UY5 434 aa21.82■■□□□ 1.08
EXOSC4-201ENST00000316052 SIL1Q9H173 461 aa21.82■■□□□ 1.08
EXOSC4-201ENST00000316052 CSADQ9Y600 493 aa21.82■■□□□ 1.08
EXOSC4-201ENST00000316052 MYH13Q9UKX3 1938 aa21.82■■□□□ 1.08
EXOSC4-201ENST00000316052 WDR66Q8TBY9 1149 aa21.81■■□□□ 1.08
EXOSC4-201ENST00000316052 OTUD5Q96G74 571 aa21.81■■□□□ 1.08
EXOSC4-201ENST00000316052 ERO1AQ96HE7 468 aa21.81■■□□□ 1.08
EXOSC4-201ENST00000316052 MAST3O60307 1309 aa21.8■■□□□ 1.08
EXOSC4-201ENST00000316052 CCL15-CCL14A0A0B4J2E2 113 aa21.8■■□□□ 1.08
EXOSC4-201ENST00000316052 GTF2A2P52657 109 aa21.8■■□□□ 1.08
EXOSC4-201ENST00000316052 SP3Q02447 781 aa21.8■■□□□ 1.08
EXOSC4-201ENST00000316052 CCL15Q16663 113 aa21.8■■□□□ 1.08
EXOSC4-201ENST00000316052 ZKSCAN4Q969J2 545 aaPredicted RBP21.8■■□□□ 1.08
EXOSC4-201ENST00000316052 TMOD2Q9NZR1 351 aa21.8■■□□□ 1.08
EXOSC4-201ENST00000316052 SNCAIPQ9Y6H5 919 aa21.8■■□□□ 1.08
EXOSC4-201ENST00000316052 SPDYE5A6NIY4 337 aa21.79■■□□□ 1.08
EXOSC4-201ENST00000316052 CIAO1O76071 339 aa21.79■■□□□ 1.08
EXOSC4-201ENST00000316052 FAM43AQ8N2R8 423 aa21.79■■□□□ 1.08
EXOSC4-201ENST00000316052 PA2G4Q9UQ80 394 aaKnown RBP21.79■■□□□ 1.08
EXOSC4-201ENST00000316052 PTPN22Q9Y2R2 807 aa21.79■■□□□ 1.08
EXOSC4-201ENST00000316052 LRRFIP2Q9Y608 721 aaKnown RBP21.79■■□□□ 1.08
EXOSC4-201ENST00000316052 CT47B1P0C2W7 299 aaPredicted RBP21.78■■□□□ 1.08
EXOSC4-201ENST00000316052 DIXDC1Q155Q3 683 aa21.78■■□□□ 1.08
EXOSC4-201ENST00000316052 ATP2B3Q16720 1220 aa21.78■■□□□ 1.08
EXOSC4-201ENST00000316052 MIGA2Q7L4E1 593 aa21.78■■□□□ 1.08
EXOSC4-201ENST00000316052 WRNIP1Q96S55 665 aa21.78■■□□□ 1.08
EXOSC4-201ENST00000316052 EFCC1Q9HA90 598 aa21.78■■□□□ 1.08
EXOSC4-201ENST00000316052 CEP126Q9P2H0 1117 aa21.78■■□□□ 1.08
EXOSC4-201ENST00000316052 FBXO3Q9UK99 471 aa21.78■■□□□ 1.08
EXOSC4-201ENST00000316052 DAGLAQ9Y4D2 1042 aa21.78■■□□□ 1.08
EXOSC4-201ENST00000316052 AK9Q5TCS8 1911 aa21.77■■□□□ 1.08
EXOSC4-201ENST00000316052 PRDX5P30044 214 aa21.77■■□□□ 1.08
EXOSC4-201ENST00000316052 TAF1CQ15572 869 aaPredicted RBP21.77■■□□□ 1.08
EXOSC4-201ENST00000316052 CDC42EP5Q6NZY7 148 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms