RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 SYT1P21579 422 aa14.65□□□□□ -0.06
SH3PXD2A-201ENST00000315994 TNNI2P48788 182 aa14.65□□□□□ -0.06
SH3PXD2A-201ENST00000315994 ZKSCAN3Q9BRR0 538 aa14.65□□□□□ -0.06
SH3PXD2A-201ENST00000315994 RXRAP19793 462 aa14.65□□□□□ -0.06
SH3PXD2A-201ENST00000315994 H0YIN7 160 aa14.65□□□□□ -0.06
SH3PXD2A-201ENST00000315994 AFMP43652 599 aa14.65□□□□□ -0.06
SH3PXD2A-201ENST00000315994 RRAGBQ5VZM2 374 aa14.65□□□□□ -0.06
SH3PXD2A-201ENST00000315994 DPP8Q6V1X1 898 aaPredicted RBP14.65□□□□□ -0.06
SH3PXD2A-201ENST00000315994 FAM200AQ8TCP9 573 aa14.65□□□□□ -0.06
SH3PXD2A-201ENST00000315994 DSCC1Q9BVC3 393 aa14.65□□□□□ -0.06
SH3PXD2A-201ENST00000315994 ANGEL1Q9UNK9 670 aaKnown RBP14.65□□□□□ -0.06
SH3PXD2A-201ENST00000315994 CCDC150Q8NCX0 1101 aa14.65□□□□□ -0.06
SH3PXD2A-201ENST00000315994 CCDC66A2RUB6 948 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 HSPA4P34932 840 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 NF2P35240 595 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 ANO6Q4KMQ2 910 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 CPLX3Q8WVH0 158 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 TRIM47Q96LD4 638 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 SSH2Q76I76 1423 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 ABCA6Q8N139 1617 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 KIF18AQ8NI77 898 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 SAP30BPQ9UHR5 308 aaKnown RBP14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 ZNF532Q9HCE3 1301 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 SPDYE3A6NKU9 549 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 USO1O60763 962 aaKnown RBP14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 SPDYE4A6NLX3 237 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 CTAGE1Q96RT6 745 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 LOC102724428A0A0B4J2F2 783 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 GOLGA6L10A6NI86 522 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 APBA3O96018 575 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 SIK1P57059 783 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 RPS8P62241 208 aaKnown RBP14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 SUPT20HQ8NEM7 779 aa14.64□□□□□ -0.07
SH3PXD2A-201ENST00000315994 LAMC1P11047 1609 aa14.63□□□□□ -0.07
SH3PXD2A-201ENST00000315994 DEXIO95424 95 aa14.63□□□□□ -0.07
SH3PXD2A-201ENST00000315994 ALDH1B1P30837 517 aa14.63□□□□□ -0.07
SH3PXD2A-201ENST00000315994 CASQ1P31415 396 aa14.63□□□□□ -0.07
SH3PXD2A-201ENST00000315994 SYCP3Q8IZU3 236 aa14.63□□□□□ -0.07
SH3PXD2A-201ENST00000315994 ADGRL3Q9HAR2 1447 aa14.63□□□□□ -0.07
SH3PXD2A-201ENST00000315994 SH2D4AQ9H788 454 aa14.63□□□□□ -0.07
SH3PXD2A-201ENST00000315994 QRICH2Q9H0J4 1663 aa14.63□□□□□ -0.07
SH3PXD2A-201ENST00000315994 TDRD12Q587J7 1177 aaKnown RBP14.63□□□□□ -0.07
SH3PXD2A-201ENST00000315994 AATFQ9NY61 560 aaKnown RBP eCLIP14.63□□□□□ -0.07
SH3PXD2A-201ENST00000315994 NDUFB9Q9Y6M9 179 aa14.63□□□□□ -0.07
SH3PXD2A-201ENST00000315994 TULP4Q9NRJ4 1543 aa14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 IL6STP40189 918 aaPredicted RBP14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 SPAG1Q07617 926 aa14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 TCERG1LQ5VWI1 586 aa14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 FLAD1Q8NFF5 587 aa14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 TBC1D22AQ8WUA7 517 aa14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 UBXN4Q92575 508 aa14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 NAP1L4Q99733 375 aaKnown RBP14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 ZNF335Q9H4Z2 1342 aaPredicted RBP14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 EIF3JO75822 258 aaKnown RBP14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 GSPT1P15170 499 aaKnown RBP14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 PROSER3Q2NL68 480 aa14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 RBM26Q5T8P6 1007 aaKnown RBP14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 EAF2Q96CJ1 260 aaPredicted RBP14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 CETN2P41208 172 aa14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 AXDND1Q5T1B0 1012 aaPredicted RBP14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 DHX58Q96C10 678 aa14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 TRPC5Q9UL62 973 aaPredicted RBP14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 ASAP1Q9ULH1 1129 aa14.62□□□□□ -0.07
SH3PXD2A-201ENST00000315994 KRT79Q5XKE5 535 aa14.61□□□□□ -0.07
SH3PXD2A-201ENST00000315994 GTPBP4Q9BZE4 634 aaKnown RBP14.61□□□□□ -0.07
SH3PXD2A-201ENST00000315994 TM6SF1Q9BZW5 370 aa14.61□□□□□ -0.07
SH3PXD2A-201ENST00000315994 COPRSQ9NQ92 184 aa14.61□□□□□ -0.07
SH3PXD2A-201ENST00000315994 GOLGA6L9A6NEM1 432 aa14.61□□□□□ -0.07
SH3PXD2A-201ENST00000315994 N4BP3O15049 544 aa14.61□□□□□ -0.07
SH3PXD2A-201ENST00000315994 CRKLP46109 303 aaKnown RBP14.61□□□□□ -0.07
SH3PXD2A-201ENST00000315994 BRINP3Q76B58 766 aa14.61□□□□□ -0.07
SH3PXD2A-201ENST00000315994 SPATA31A3Q5VYP0 1347 aa14.61□□□□□ -0.07
SH3PXD2A-201ENST00000315994 INO80Q9ULG1 1556 aaPredicted RBP14.61□□□□□ -0.07
SH3PXD2A-201ENST00000315994 NCAPD2Q15021 1401 aa14.61□□□□□ -0.07
SH3PXD2A-201ENST00000315994 PPP2R5BQ15173 497 aa14.61□□□□□ -0.07
SH3PXD2A-201ENST00000315994 CCDC24Q8N4L8 307 aa14.61□□□□□ -0.07
SH3PXD2A-201ENST00000315994 UBASH3AP57075 661 aa14.61□□□□□ -0.07
SH3PXD2A-201ENST00000315994 DIP2CQ9Y2E4 1556 aa14.61□□□□□ -0.07
SH3PXD2A-201ENST00000315994 MCM7P33993 719 aa14.61□□□□□ -0.07
SH3PXD2A-201ENST00000315994 HAUS7Q99871 368 aa14.61□□□□□ -0.07
SH3PXD2A-201ENST00000315994 PSMA7O14818 248 aa14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 LIG1P18858 919 aa14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 PDE6BP35913 854 aa14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 RILPL1Q5EBL4 403 aa14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 CIAO1O76071 339 aa14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 SSR1P43307 286 aaKnown RBP14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 ASIC1P78348 528 aa14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 GRM1Q13255 1194 aa14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 KIF4BQ2VIQ3 1234 aa14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 GIGYF2Q6Y7W6 1299 aaKnown RBP14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 BCORL1Q5H9F3 1711 aa14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 CPSF1Q10570 1443 aaKnown RBP14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 PPRC1Q5VV67 1664 aaKnown RBP14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 PATL2C9JE40 543 aaKnown RBP14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 SKIDA1Q1XH10 827 aa14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 NEBLO76041 1014 aa14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 DTHD1Q6ZMT9 781 aa14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 TRMT1LQ7Z2T5 733 aaKnown RBP14.6□□□□□ -0.07
SH3PXD2A-201ENST00000315994 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms