RNA–Protein interactions for RNA: ENST00000312511.3

PRM1-201, Transcript of protamine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRM1, Length 424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRM1-201ENST00000312511 MFSD14BQ5SR56 506 aa13.79□□□□□ -0.2
PRM1-201ENST00000312511 PPP4R3CPQ6ZMV5 832 aa13.79□□□□□ -0.2
PRM1-201ENST00000312511 DZIP1LQ8IYY4 767 aaKnown RBP13.79□□□□□ -0.2
PRM1-201ENST00000312511 TTF2Q9UNY4 1162 aaKnown RBP13.79□□□□□ -0.2
PRM1-201ENST00000312511 FAM205AQ6ZU69 1335 aa13.79□□□□□ -0.2
PRM1-201ENST00000312511 TAF1CQ15572 869 aaPredicted RBP13.78□□□□□ -0.2
PRM1-201ENST00000312511 SLC9C1Q4G0N8 1177 aa13.78□□□□□ -0.2
PRM1-201ENST00000312511 BEND3Q5T5X7 828 aa13.78□□□□□ -0.2
PRM1-201ENST00000312511 LDHAL6AQ6ZMR3 332 aa13.78□□□□□ -0.2
PRM1-201ENST00000312511 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.78□□□□□ -0.2
PRM1-201ENST00000312511 TDRD7Q8NHU6 1098 aaKnown RBP13.78□□□□□ -0.2
PRM1-201ENST00000312511 SH3TC2Q8TF17 1288 aa13.78□□□□□ -0.2
PRM1-201ENST00000312511 OTUD5Q96G74 571 aa13.78□□□□□ -0.2
PRM1-201ENST00000312511 TMEM106CQ9BVX2 250 aa13.78□□□□□ -0.2
PRM1-201ENST00000312511 SERPINA10Q9UK55 444 aa13.78□□□□□ -0.2
PRM1-201ENST00000312511 FANCIQ9NVI1 1328 aa13.78□□□□□ -0.2
PRM1-201ENST00000312511 VAMP4O75379 141 aa13.77□□□□□ -0.21
PRM1-201ENST00000312511 ECM2O94769 699 aaPredicted RBP13.77□□□□□ -0.21
PRM1-201ENST00000312511 CACNB3P54284 484 aa13.77□□□□□ -0.21
PRM1-201ENST00000312511 MAP3K9P80192 1104 aa13.77□□□□□ -0.21
PRM1-201ENST00000312511 CCDC27Q2M243 656 aa13.77□□□□□ -0.21
PRM1-201ENST00000312511 FAM84BQ96KN1 310 aaPredicted RBP13.77□□□□□ -0.21
PRM1-201ENST00000312511 PUS3Q9BZE2 481 aaKnown RBP13.77□□□□□ -0.21
PRM1-201ENST00000312511 ZFYVE28Q9HCC9 887 aa13.77□□□□□ -0.21
PRM1-201ENST00000312511 CNNM1Q9NRU3 951 aa13.77□□□□□ -0.21
PRM1-201ENST00000312511 H0YGN5 161 aa13.76□□□□□ -0.21
PRM1-201ENST00000312511 CRKP46108 304 aa13.76□□□□□ -0.21
PRM1-201ENST00000312511 TNFAIP1Q13829 316 aa13.76□□□□□ -0.21
PRM1-201ENST00000312511 CCDC57Q2TAC2 916 aa13.76□□□□□ -0.21
PRM1-201ENST00000312511 SLC4A8Q2Y0W8 1093 aa13.76□□□□□ -0.21
PRM1-201ENST00000312511 TAF7LQ5H9L4 462 aa13.76□□□□□ -0.21
PRM1-201ENST00000312511 IQSEC3Q9UPP2 1182 aaPredicted RBP13.76□□□□□ -0.21
PRM1-201ENST00000312511 SNCAIPQ9Y6H5 919 aa13.76□□□□□ -0.21
PRM1-201ENST00000312511 CEP290O15078 2479 aa13.76□□□□□ -0.21
PRM1-201ENST00000312511 ARAP2Q8WZ64 1704 aa13.76□□□□□ -0.21
PRM1-201ENST00000312511 LAMA3Q16787 3333 aa13.75□□□□□ -0.21
PRM1-201ENST00000312511 HIBADHP31937 336 aaKnown RBP13.75□□□□□ -0.21
PRM1-201ENST00000312511 GTF2A2P52657 109 aa13.75□□□□□ -0.21
PRM1-201ENST00000312511 COL6A3P12111 3177 aa13.75□□□□□ -0.21
PRM1-201ENST00000312511 TRIOBPQ9H2D6 2365 aa13.75□□□□□ -0.21
PRM1-201ENST00000312511 IL16Q14005 1332 aa13.74□□□□□ -0.21
PRM1-201ENST00000312511 BTBD19C9JJ37 291 aa13.74□□□□□ -0.21
PRM1-201ENST00000312511 GRM8O00222 908 aa13.74□□□□□ -0.21
PRM1-201ENST00000312511 CTGFP29279 349 aa13.74□□□□□ -0.21
PRM1-201ENST00000312511 UBE4AQ14139 1066 aa13.74□□□□□ -0.21
PRM1-201ENST00000312511 NBPF11Q86T75 865 aa13.74□□□□□ -0.21
PRM1-201ENST00000312511 ZKSCAN4Q969J2 545 aaPredicted RBP13.74□□□□□ -0.21
PRM1-201ENST00000312511 KAZALD1Q96I82 304 aa13.74□□□□□ -0.21
PRM1-201ENST00000312511 CSADQ9Y600 493 aa13.74□□□□□ -0.21
PRM1-201ENST00000312511 SPDYE5A6NIY4 337 aa13.73□□□□□ -0.21
PRM1-201ENST00000312511 IRF6O14896 467 aa13.73□□□□□ -0.21
PRM1-201ENST00000312511 TLR2O60603 784 aa13.73□□□□□ -0.21
PRM1-201ENST00000312511 LACTBP83111 547 aaPredicted RBP13.73□□□□□ -0.21
PRM1-201ENST00000312511 EXOSC9Q06265 439 aaKnown RBP13.73□□□□□ -0.21
PRM1-201ENST00000312511 CHAF1AQ13111 956 aaPredicted RBP13.73□□□□□ -0.21
PRM1-201ENST00000312511 MTFR1Q15390 333 aa13.73□□□□□ -0.21
PRM1-201ENST00000312511 SHISA4Q96DD7 197 aa13.73□□□□□ -0.21
PRM1-201ENST00000312511 SUCLG2Q96I99 432 aa13.73□□□□□ -0.21
PRM1-201ENST00000312511 SALL2Q9Y467 1007 aaPredicted RBP13.73□□□□□ -0.21
PRM1-201ENST00000312511 A0A0C4DFX4 3053 aa13.72□□□□□ -0.21
PRM1-201ENST00000312511 FBXO33Q7Z6M2 555 aa13.72□□□□□ -0.21
PRM1-201ENST00000312511 WRNIP1Q96S55 665 aa13.72□□□□□ -0.21
PRM1-201ENST00000312511 SPINK5Q9NQ38 1064 aaPredicted RBP13.72□□□□□ -0.21
PRM1-201ENST00000312511 RIPOR2Q9Y4F9 1068 aa13.72□□□□□ -0.21
PRM1-201ENST00000312511 TNNI2P48788 182 aa13.71□□□□□ -0.21
PRM1-201ENST00000312511 ARHGEF6Q15052 776 aa13.71□□□□□ -0.21
PRM1-201ENST00000312511 APOBEC3HQ6NTF7 200 aaKnown RBP13.71□□□□□ -0.21
PRM1-201ENST00000312511 CHRDL2Q6WN34 429 aa13.71□□□□□ -0.21
PRM1-201ENST00000312511 CETPP11597 493 aa13.7□□□□□ -0.22
PRM1-201ENST00000312511 LRRC24Q50LG9 513 aa13.7□□□□□ -0.22
PRM1-201ENST00000312511 C17orf99Q6UX52 265 aa13.7□□□□□ -0.22
PRM1-201ENST00000312511 MIGA2Q7L4E1 593 aa13.7□□□□□ -0.22
PRM1-201ENST00000312511 ERO1BQ86YB8 467 aa13.7□□□□□ -0.22
PRM1-201ENST00000312511 TRIM47Q96LD4 638 aa13.7□□□□□ -0.22
PRM1-201ENST00000312511 C9orf78Q9NZ63 289 aaPredicted RBP13.7□□□□□ -0.22
PRM1-201ENST00000312511 CPA4Q9UI42 421 aa13.7□□□□□ -0.22
PRM1-201ENST00000312511 CACNA1FO60840 1977 aa13.7□□□□□ -0.22
PRM1-201ENST00000312511 NBPF7P0C2Y1 421 aaPredicted RBP13.69□□□□□ -0.22
PRM1-201ENST00000312511 INPP5BP32019 993 aa13.69□□□□□ -0.22
PRM1-201ENST00000312511 BCAMP50895 628 aa13.69□□□□□ -0.22
PRM1-201ENST00000312511 PPIL2Q13356 520 aa13.69□□□□□ -0.22
PRM1-201ENST00000312511 SNAPC2Q13487 334 aa13.69□□□□□ -0.22
PRM1-201ENST00000312511 SLC4A10Q6U841 1118 aa13.69□□□□□ -0.22
PRM1-201ENST00000312511 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.69□□□□□ -0.22
PRM1-201ENST00000312511 TEKT1Q969V4 418 aa13.69□□□□□ -0.22
PRM1-201ENST00000312511 RBM27Q9P2N5 1060 aaKnown RBP13.69□□□□□ -0.22
PRM1-201ENST00000312511 PSMC4P43686 418 aa13.68□□□□□ -0.22
PRM1-201ENST00000312511 HDLBPQ00341 1268 aaKnown RBP13.68□□□□□ -0.22
PRM1-201ENST00000312511 MOGSQ13724 837 aa13.68□□□□□ -0.22
PRM1-201ENST00000312511 KIF22Q14807 665 aa13.68□□□□□ -0.22
PRM1-201ENST00000312511 VPS37DQ86XT2 251 aa13.68□□□□□ -0.22
PRM1-201ENST00000312511 VGLL2Q8N8G2 317 aa13.68□□□□□ -0.22
PRM1-201ENST00000312511 KLHDC4Q8TBB5 520 aa13.68□□□□□ -0.22
PRM1-201ENST00000312511 ZDHHC15Q96MV8 337 aa13.68□□□□□ -0.22
PRM1-201ENST00000312511 BICC1Q9H694 974 aaKnown RBP13.68□□□□□ -0.22
PRM1-201ENST00000312511 ZCCHC17Q9NP64 241 aaKnown RBP13.68□□□□□ -0.22
PRM1-201ENST00000312511 MROH5Q6ZUA9 1318 aa13.67□□□□□ -0.22
PRM1-201ENST00000312511 ADGRA2Q96PE1 1338 aa13.67□□□□□ -0.22
PRM1-201ENST00000312511 ALDH1L1O75891 902 aa13.67□□□□□ -0.22
PRM1-201ENST00000312511 OSBPP22059 807 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms