RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 SPC24Q8NBT2 197 aa23.13■■□□□ 1.29
LRFN4-201ENST00000309602 ATP6V1AP38606 617 aa23.12■■□□□ 1.29
LRFN4-201ENST00000309602 DDB1Q16531 1140 aa23.12■■□□□ 1.29
LRFN4-201ENST00000309602 SPATA5Q8NB90 893 aa23.12■■□□□ 1.29
LRFN4-201ENST00000309602 UTP14AQ9BVJ6 771 aaKnown RBP23.12■■□□□ 1.29
LRFN4-201ENST00000309602 CPLX1O14810 134 aa23.12■■□□□ 1.29
LRFN4-201ENST00000309602 SLC5A1P13866 664 aa23.12■■□□□ 1.29
LRFN4-201ENST00000309602 FBXO18Q8NFZ0 1043 aa23.12■■□□□ 1.29
LRFN4-201ENST00000309602 STRBPQ96SI9 672 aaKnown RBP23.12■■□□□ 1.29
LRFN4-201ENST00000309602 SPATA31A1Q5TZJ5 1347 aa23.12■■□□□ 1.29
LRFN4-201ENST00000309602 CAMTA2O94983 1202 aa23.11■■□□□ 1.29
LRFN4-201ENST00000309602 ME1P48163 572 aa23.11■■□□□ 1.29
LRFN4-201ENST00000309602 RASGRF1Q13972 1273 aa23.11■■□□□ 1.29
LRFN4-201ENST00000309602 CCDC73Q6ZRK6 1079 aa23.11■■□□□ 1.29
LRFN4-201ENST00000309602 ENGASEQ8NFI3 743 aa23.11■■□□□ 1.29
LRFN4-201ENST00000309602 TDRD7Q8NHU6 1098 aaKnown RBP23.11■■□□□ 1.29
LRFN4-201ENST00000309602 CDCA7Q9BWT1 371 aaPredicted RBP23.11■■□□□ 1.29
LRFN4-201ENST00000309602 GJB4Q9NTQ9 266 aa23.11■■□□□ 1.29
LRFN4-201ENST00000309602 RTEL1Q9NZ71 1219 aa23.11■■□□□ 1.29
LRFN4-201ENST00000309602 ADAMTS2O95450 1211 aa23.11■■□□□ 1.29
LRFN4-201ENST00000309602 ZNF165P49910 485 aa23.11■■□□□ 1.29
LRFN4-201ENST00000309602 C17orf53Q8N3J3 647 aaPredicted RBP23.11■■□□□ 1.29
LRFN4-201ENST00000309602 MPHOSPH8Q99549 860 aa23.11■■□□□ 1.29
LRFN4-201ENST00000309602 ANGEL1Q9UNK9 670 aaKnown RBP23.11■■□□□ 1.29
LRFN4-201ENST00000309602 ITPK1Q13572 414 aa23.1■■□□□ 1.29
LRFN4-201ENST00000309602 AIDAQ96BJ3 306 aa23.1■■□□□ 1.29
LRFN4-201ENST00000309602 KCNF1Q9H3M0 494 aa23.1■■□□□ 1.29
LRFN4-201ENST00000309602 C4AP0C0L4 1744 aa23.1■■□□□ 1.29
LRFN4-201ENST00000309602 C4BP0C0L5 1744 aa23.1■■□□□ 1.29
LRFN4-201ENST00000309602 LOC102724428A0A0B4J2F2 783 aa23.1■■□□□ 1.29
LRFN4-201ENST00000309602 SH2B2O14492 632 aaPredicted RBP23.1■■□□□ 1.29
LRFN4-201ENST00000309602 SIK1P57059 783 aa23.1■■□□□ 1.29
LRFN4-201ENST00000309602 FSIP1Q8NA03 581 aa23.1■■□□□ 1.29
LRFN4-201ENST00000309602 PCDHA7Q9UN72 937 aa23.1■■□□□ 1.29
LRFN4-201ENST00000309602 B4E1Z4 1266 aa23.09■■□□□ 1.29
LRFN4-201ENST00000309602 CTAGE5O15320 804 aa23.09■■□□□ 1.29
LRFN4-201ENST00000309602 POLR3DP05423 398 aaPredicted RBP23.09■■□□□ 1.29
LRFN4-201ENST00000309602 FAM160A1Q05DH4 1040 aa23.09■■□□□ 1.29
LRFN4-201ENST00000309602 NOLC1Q14978 699 aaKnown RBP eCLIP23.09■■□□□ 1.29
LRFN4-201ENST00000309602 MARCH10Q8NA82 808 aaPredicted RBP23.09■■□□□ 1.29
LRFN4-201ENST00000309602 NEDD4P46934 1319 aa23.09■■□□□ 1.29
LRFN4-201ENST00000309602 MAGEB6Q8N7X4 407 aa23.09■■□□□ 1.29
LRFN4-201ENST00000309602 SENP2Q9HC62 589 aa23.09■■□□□ 1.29
LRFN4-201ENST00000309602 CLIC4Q9Y696 253 aa23.09■■□□□ 1.29
LRFN4-201ENST00000309602 EPB41L4AQ9HCS5 686 aaPredicted RBP23.08■■□□□ 1.29
LRFN4-201ENST00000309602 ZMYM6O95789 1325 aa23.08■■□□□ 1.29
LRFN4-201ENST00000309602 LINC00301Q8NCQ3 95 aa23.08■■□□□ 1.28
LRFN4-201ENST00000309602 KIF28PB7ZC32 967 aa23.07■■□□□ 1.28
LRFN4-201ENST00000309602 KINO60870 393 aaKnown RBP23.07■■□□□ 1.28
LRFN4-201ENST00000309602 MBD4O95243 580 aa23.07■■□□□ 1.28
LRFN4-201ENST00000309602 ALX1Q15699 326 aa23.07■■□□□ 1.28
LRFN4-201ENST00000309602 PARP10Q53GL7 1025 aa23.07■■□□□ 1.28
LRFN4-201ENST00000309602 INCENPQ9NQS7 918 aa23.07■■□□□ 1.28
LRFN4-201ENST00000309602 THRAP3Q9Y2W1 955 aaKnown RBP23.07■■□□□ 1.28
LRFN4-201ENST00000309602 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.07■■□□□ 1.28
LRFN4-201ENST00000309602 GOLGA6L6A8MZA4 724 aa23.07■■□□□ 1.28
LRFN4-201ENST00000309602 NTSR2O95665 410 aa23.07■■□□□ 1.28
LRFN4-201ENST00000309602 RXRAP19793 462 aa23.07■■□□□ 1.28
LRFN4-201ENST00000309602 MAP3K12Q12852 859 aa23.07■■□□□ 1.28
LRFN4-201ENST00000309602 MYSM1Q5VVJ2 828 aa23.07■■□□□ 1.28
LRFN4-201ENST00000309602 C11orf57Q6ZUT1 292 aaPredicted RBP23.07■■□□□ 1.28
LRFN4-201ENST00000309602 PHLPP1O60346 1717 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 TPM3P06753 285 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 METAP2P50579 478 aaKnown RBP eCLIP23.06■■□□□ 1.288e-8■■■■■ 32.5
LRFN4-201ENST00000309602 CCDC152Q4G0S7 254 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 MYH14Q7Z406 1995 aaKnown RBP23.06■■□□□ 1.28
LRFN4-201ENST00000309602 NRAPQ86VF7 1730 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 MRPS27Q92552 414 aaKnown RBP23.06■■□□□ 1.28
LRFN4-201ENST00000309602 DOCK2Q92608 1830 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 NIP7Q9Y221 180 aaKnown RBP eCLIP23.06■■□□□ 1.28
LRFN4-201ENST00000309602 RREB1Q92766 1687 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 PATL2C9JE40 543 aaKnown RBP23.06■■□□□ 1.28
LRFN4-201ENST00000309602 UBAP1LF5GYI3 381 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 CAVIN2O95810 425 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 STK38Q15208 465 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 ADALQ6DHV7 355 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 APOA5Q6Q788 366 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 BRAPQ7Z569 592 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 PLA2G4DQ86XP0 818 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 IFNL3Q8IZI9 196 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 PKNOX2Q96KN3 472 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 AIFM3Q96NN9 605 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 ARMT1Q9H993 441 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 PYCARDQ9ULZ3 195 aa23.06■■□□□ 1.28
LRFN4-201ENST00000309602 BCAMP50895 628 aa23.05■■□□□ 1.28
LRFN4-201ENST00000309602 ZNF75DP51815 510 aa23.05■■□□□ 1.28
LRFN4-201ENST00000309602 KIF23Q02241 960 aaPredicted RBP23.05■■□□□ 1.28
LRFN4-201ENST00000309602 IQCB1Q15051 598 aa23.05■■□□□ 1.28
LRFN4-201ENST00000309602 IGDCC4Q8TDY8 1250 aa23.05■■□□□ 1.28
LRFN4-201ENST00000309602 SPTLC3Q9NUV7 552 aa23.05■■□□□ 1.28
LRFN4-201ENST00000309602 POLR3EQ9NVU0 708 aa23.05■■□□□ 1.28
LRFN4-201ENST00000309602 CDC27P30260 824 aa23.04■■□□□ 1.28
LRFN4-201ENST00000309602 STX1AQ16623 288 aa23.04■■□□□ 1.28
LRFN4-201ENST00000309602 FMR1NBQ8N0W7 255 aaPredicted RBP23.04■■□□□ 1.28
LRFN4-201ENST00000309602 TRIM5Q9C035 493 aa23.04■■□□□ 1.28
LRFN4-201ENST00000309602 TACC3Q9Y6A5 838 aa23.04■■□□□ 1.28
LRFN4-201ENST00000309602 A0A1W2PQ27 194 aa23.04■■□□□ 1.28
LRFN4-201ENST00000309602 A0A1W2PQ64 194 aa23.04■■□□□ 1.28
LRFN4-201ENST00000309602 A0A1W2PQD8 194 aa23.04■■□□□ 1.28
LRFN4-201ENST00000309602 TOM1O60784 492 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms