RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 FGD1P98174 961 aa26.4■■□□□ 1.82
SMAD1-201ENST00000302085 CHAMP1Q96JM3 812 aa26.4■■□□□ 1.82
SMAD1-201ENST00000302085 EPB41L4AQ9HCS5 686 aaPredicted RBP26.4■■□□□ 1.82
SMAD1-201ENST00000302085 ZBTB22O15209 634 aa26.39■■□□□ 1.82
SMAD1-201ENST00000302085 BBOX1O75936 387 aa26.39■■□□□ 1.82
SMAD1-201ENST00000302085 MCTP1Q6DN14 999 aa26.39■■□□□ 1.82
SMAD1-201ENST00000302085 MB21D2Q8IYB1 491 aaPredicted RBP26.39■■□□□ 1.82
SMAD1-201ENST00000302085 MIGA1Q8NAN2 632 aa26.39■■□□□ 1.82
SMAD1-201ENST00000302085 CRAMP1Q96RY5 1269 aa26.39■■□□□ 1.82
SMAD1-201ENST00000302085 ZNF384Q8TF68 577 aa26.38■■□□□ 1.81
SMAD1-201ENST00000302085 GOLGA6L22H0YM25 854 aa26.38■■□□□ 1.81
SMAD1-201ENST00000302085 PTMSP20962 102 aa26.38■■□□□ 1.81
SMAD1-201ENST00000302085 TBC1D10CQ8IV04 446 aa26.38■■□□□ 1.81
SMAD1-201ENST00000302085 FBXL16Q8N461 479 aa26.38■■□□□ 1.81
SMAD1-201ENST00000302085 NCOA7Q8NI08 942 aa26.38■■□□□ 1.81
SMAD1-201ENST00000302085 GTF3C6Q969F1 213 aa26.38■■□□□ 1.81
SMAD1-201ENST00000302085 ZMYM6O95789 1325 aa26.38■■□□□ 1.81
SMAD1-201ENST00000302085 STX6O43752 255 aa26.37■■□□□ 1.81
SMAD1-201ENST00000302085 GNAT2P19087 354 aa26.37■■□□□ 1.81
SMAD1-201ENST00000302085 APOBRQ0VD83 1088 aa26.37■■□□□ 1.81
SMAD1-201ENST00000302085 SLC4A4Q9Y6R1 1079 aa26.37■■□□□ 1.81
SMAD1-201ENST00000302085 C15orf52Q6ZUT6 534 aaKnown RBP26.37■■□□□ 1.81
SMAD1-201ENST00000302085 BRIP1Q9BX63 1249 aa26.37■■□□□ 1.81
SMAD1-201ENST00000302085 CACNA1SQ13698 1873 aa26.36■■□□□ 1.81
SMAD1-201ENST00000302085 PFKFB2O60825 505 aa26.36■■□□□ 1.81
SMAD1-201ENST00000302085 ANTXR2P58335 489 aa26.36■■□□□ 1.81
SMAD1-201ENST00000302085 CHAF1AQ13111 956 aaPredicted RBP26.36■■□□□ 1.81
SMAD1-201ENST00000302085 ZSCAN22P10073 491 aaPredicted RBP26.35■■□□□ 1.81
SMAD1-201ENST00000302085 MCM5P33992 734 aa26.35■■□□□ 1.81
SMAD1-201ENST00000302085 GPR101Q96P66 508 aaPredicted RBP26.35■■□□□ 1.81
SMAD1-201ENST00000302085 GPHNQ9NQX3 736 aaPredicted RBP26.35■■□□□ 1.81
SMAD1-201ENST00000302085 NSFL1CQ9UNZ2 370 aaKnown RBP26.35■■□□□ 1.81
SMAD1-201ENST00000302085 MAGEB6P1A0A0J9YX57 407 aa26.35■■□□□ 1.81
SMAD1-201ENST00000302085 NKX2-3Q8TAU0 364 aa26.35■■□□□ 1.81
SMAD1-201ENST00000302085 NAPBQ9H115 298 aa26.35■■□□□ 1.81
SMAD1-201ENST00000302085 PRC1O43663 620 aa26.34■■□□□ 1.81
SMAD1-201ENST00000302085 MMP10P09238 476 aa26.34■■□□□ 1.81
SMAD1-201ENST00000302085 NAA16Q6N069 864 aaPredicted RBP26.34■■□□□ 1.81
SMAD1-201ENST00000302085 NSUN4Q96CB9 384 aaKnown RBP26.34■■□□□ 1.81
SMAD1-201ENST00000302085 RIOK1Q9BRS2 568 aaKnown RBP26.34■■□□□ 1.81
SMAD1-201ENST00000302085 LMBRD1Q9NUN5 540 aa26.34■■□□□ 1.81
SMAD1-201ENST00000302085 NRXN2Q9P2S2 1712 aa26.34■■□□□ 1.81
SMAD1-201ENST00000302085 ANKRD31Q8N7Z5 1873 aa26.33■■□□□ 1.81
SMAD1-201ENST00000302085 ATP2B4P23634 1241 aa26.33■■□□□ 1.81
SMAD1-201ENST00000302085 SCRN1Q12765 414 aa26.33■■□□□ 1.81
SMAD1-201ENST00000302085 SKOR2Q2VWA4 1001 aaPredicted RBP26.33■■□□□ 1.81
SMAD1-201ENST00000302085 RALYLQ86SE5 291 aaKnown RBP26.33■■□□□ 1.81
SMAD1-201ENST00000302085 TDRD7Q8NHU6 1098 aaKnown RBP26.33■■□□□ 1.81
SMAD1-201ENST00000302085 CAMKK2Q96RR4 588 aa26.33■■□□□ 1.81
SMAD1-201ENST00000302085 RGPD3A6NKT7 1758 aaPredicted RBP26.33■■□□□ 1.81
SMAD1-201ENST00000302085 RGPD4Q7Z3J3 1758 aa26.33■■□□□ 1.81
SMAD1-201ENST00000302085 EVCP57679 992 aa26.33■■□□□ 1.8
SMAD1-201ENST00000302085 MECOMQ03112 1051 aa26.33■■□□□ 1.8
SMAD1-201ENST00000302085 NACAP1Q9BZK3 213 aa26.33■■□□□ 1.8
SMAD1-201ENST00000302085 MTMR6Q9Y217 621 aa26.33■■□□□ 1.8
SMAD1-201ENST00000302085 MYH13Q9UKX3 1938 aa26.32■■□□□ 1.8
SMAD1-201ENST00000302085 WDR19Q8NEZ3 1342 aa26.32■■□□□ 1.8
SMAD1-201ENST00000302085 EZH2Q15910 746 aaKnown RBP26.32■■□□□ 1.8
SMAD1-201ENST00000302085 ZNF274Q96GC6 653 aaPredicted RBP26.32■■□□□ 1.8
SMAD1-201ENST00000302085 JAG2Q9Y219 1238 aa26.32■■□□□ 1.8
SMAD1-201ENST00000302085 TACC3Q9Y6A5 838 aa26.32■■□□□ 1.8
SMAD1-201ENST00000302085 UFL1O94874 794 aa26.31■■□□□ 1.8
SMAD1-201ENST00000302085 PDIA3P30101 505 aaKnown RBP26.31■■□□□ 1.8
SMAD1-201ENST00000302085 DYNLL1P63167 89 aaKnown RBP26.31■■□□□ 1.8
SMAD1-201ENST00000302085 MSL1Q68DK7 614 aa26.31■■□□□ 1.8
SMAD1-201ENST00000302085 INCENPQ9NQS7 918 aa26.31■■□□□ 1.8
SMAD1-201ENST00000302085 PODXL2Q9NZ53 605 aa26.31■■□□□ 1.8
SMAD1-201ENST00000302085 GGA1Q9UJY5 639 aa26.31■■□□□ 1.8
SMAD1-201ENST00000302085 PARP3Q9Y6F1 533 aa26.31■■□□□ 1.8
SMAD1-201ENST00000302085 PRDX5P30044 214 aa26.31■■□□□ 1.8
SMAD1-201ENST00000302085 EN1Q05925 392 aaPredicted RBP26.31■■□□□ 1.8
SMAD1-201ENST00000302085 CTDSPL2Q05D32 466 aa26.31■■□□□ 1.8
SMAD1-201ENST00000302085 TRDNQ13061 729 aa26.31■■□□□ 1.8
SMAD1-201ENST00000302085 JAK2O60674 1132 aa26.3■■□□□ 1.8
SMAD1-201ENST00000302085 SRGNP10124 158 aa26.3■■□□□ 1.8
SMAD1-201ENST00000302085 TDO2P48775 406 aa26.3■■□□□ 1.8
SMAD1-201ENST00000302085 LARP1BQ659C4 914 aaKnown RBP26.3■■□□□ 1.8
SMAD1-201ENST00000302085 CYB5R4Q7L1T6 521 aa26.3■■□□□ 1.8
SMAD1-201ENST00000302085 ZNF804AQ7Z570 1209 aa26.3■■□□□ 1.8
SMAD1-201ENST00000302085 FBXO41Q8TF61 875 aa26.3■■□□□ 1.8
SMAD1-201ENST00000302085 ANO8Q9HCE9 1232 aaPredicted RBP26.3■■□□□ 1.8
SMAD1-201ENST00000302085 PRPF40AO75400 957 aaKnown RBP26.29■■□□□ 1.8
SMAD1-201ENST00000302085 SP8Q8IXZ3 490 aa26.29■■□□□ 1.8
SMAD1-201ENST00000302085 GZF1Q9H116 711 aaPredicted RBP26.29■■□□□ 1.8
SMAD1-201ENST00000302085 POLLQ9UGP5 575 aa26.29■■□□□ 1.8
SMAD1-201ENST00000302085 F13A1P00488 732 aa26.29■■□□□ 1.8
SMAD1-201ENST00000302085 TMC4Q7Z404 712 aa26.29■■□□□ 1.8
SMAD1-201ENST00000302085 SDR42E1Q8WUS8 393 aa26.29■■□□□ 1.8
SMAD1-201ENST00000302085 BRPF3Q9ULD4 1205 aa26.29■■□□□ 1.8
SMAD1-201ENST00000302085 NEDD4P46934 1319 aa26.28■■□□□ 1.8
SMAD1-201ENST00000302085 SALL1Q9NSC2 1324 aa26.28■■□□□ 1.8
SMAD1-201ENST00000302085 PPEF1O14829 653 aaPredicted RBP26.28■■□□□ 1.8
SMAD1-201ENST00000302085 CCT2P78371 535 aaKnown RBP26.28■■□□□ 1.8
SMAD1-201ENST00000302085 TBC1D16Q8TBP0 767 aa26.28■■□□□ 1.8
SMAD1-201ENST00000302085 LLPHQ9BRT6 129 aaKnown RBP26.28■■□□□ 1.8
SMAD1-201ENST00000302085 B4E1Z4 1266 aa26.27■■□□□ 1.8
SMAD1-201ENST00000302085 CTDNEP1O95476 244 aa26.27■■□□□ 1.8
SMAD1-201ENST00000302085 NPR1P16066 1061 aa26.27■■□□□ 1.8
SMAD1-201ENST00000302085 SLC15A2Q16348 729 aa26.27■■□□□ 1.8
SMAD1-201ENST00000302085 FOXD4L6Q3SYB3 417 aaPredicted RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms